RNA–Protein interactions for RNA: ENSMUST00000041643.3

Pcif1-201, Transcript of Phosphorylated CTD-interacting factor 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcif1, Length 5,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcif1-201ENSMUST00000041643 Hoxd3P09027 433 aa9.23□□□□□ -0.93
Pcif1-201ENSMUST00000041643 Slc25a29Q8BL03 306 aa9.23□□□□□ -0.93
Pcif1-201ENSMUST00000041643 Olfr498Q8VEW2 330 aa9.23□□□□□ -0.93
Pcif1-201ENSMUST00000041643 Col4a2P08122 1707 aa9.23□□□□□ -0.93
Pcif1-201ENSMUST00000041643 Ighv1-77A0A0G2JGS9 117 aa9.23□□□□□ -0.93
Pcif1-201ENSMUST00000041643 P01750 117 aa9.22□□□□□ -0.93
Pcif1-201ENSMUST00000041643 Sec16aA2AIX1 2377 aa9.22□□□□□ -0.93
Pcif1-201ENSMUST00000041643 Ighv1-23A0A0A6YVW3 117 aa9.22□□□□□ -0.93
Pcif1-201ENSMUST00000041643 Wfdc9Q3UW41 83 aa9.22□□□□□ -0.93
Pcif1-201ENSMUST00000041643 5930422O12RikQ8C4Y4 123 aa9.22□□□□□ -0.93
Pcif1-201ENSMUST00000041643 FancmQ8BGE5 2021 aa9.22□□□□□ -0.93
Pcif1-201ENSMUST00000041643 Igkv4-57-1A0A075B5M4 119 aa9.22□□□□□ -0.93
Pcif1-201ENSMUST00000041643 Gm9513B3GLJ6 99 aa9.22□□□□□ -0.93
Pcif1-201ENSMUST00000041643 P03985 172 aa9.22□□□□□ -0.93
Pcif1-201ENSMUST00000041643 CtsgP28293 261 aa9.22□□□□□ -0.93
Pcif1-201ENSMUST00000041643 P01793 123 aa9.22□□□□□ -0.93
Pcif1-201ENSMUST00000041643 Dad1P61804 113 aa9.22□□□□□ -0.93
Pcif1-201ENSMUST00000041643 AponG3X9D6 251 aa9.21□□□□□ -0.93
Pcif1-201ENSMUST00000041643 Med12A2AGH6 2190 aa9.21□□□□□ -0.93
Pcif1-201ENSMUST00000041643 Gm7257D3YX25 99 aa9.21□□□□□ -0.93
Pcif1-201ENSMUST00000041643 A930003A15RikQ3U552 87 aa9.21□□□□□ -0.93
Pcif1-201ENSMUST00000041643 Clec5aQ9R007 190 aa9.21□□□□□ -0.93
Pcif1-201ENSMUST00000041643 Abca4O35600 2310 aa9.21□□□□□ -0.94
Pcif1-201ENSMUST00000041643 Shisal2aA2A9G7 189 aa9.21□□□□□ -0.94
Pcif1-201ENSMUST00000041643 P04944 107 aa9.21□□□□□ -0.94
Pcif1-201ENSMUST00000041643 Plp1P60202 277 aa9.21□□□□□ -0.94
Pcif1-201ENSMUST00000041643 Igkv4-70A0A0B4J1I5 116 aa9.21□□□□□ -0.94
Pcif1-201ENSMUST00000041643 Gm12169F2Z474 250 aa9.21□□□□□ -0.94
Pcif1-201ENSMUST00000041643 Fhl1P97447 280 aaKnown RBP9.21□□□□□ -0.94
Pcif1-201ENSMUST00000041643 Timm10bQ9WV96 100 aa9.21□□□□□ -0.94
Pcif1-201ENSMUST00000041643 Armcx4E9PWM3 2356 aa9.21□□□□□ -0.94
Pcif1-201ENSMUST00000041643 Tet1Q3URK3 2007 aaKnown RBP9.21□□□□□ -0.94
Pcif1-201ENSMUST00000041643 Gm20379A0A087WR34 119 aa9.2□□□□□ -0.94
Pcif1-201ENSMUST00000041643 Trav3n-3A0A0G2JEM0 114 aa9.2□□□□□ -0.94
Pcif1-201ENSMUST00000041643 4930447F04RikA2AFR2 126 aa9.2□□□□□ -0.94
Pcif1-201ENSMUST00000041643 Lyrm9Q3UN90 78 aa9.2□□□□□ -0.94
Pcif1-201ENSMUST00000041643 Bub3Q9WVA3 326 aa9.2□□□□□ -0.94
Pcif1-201ENSMUST00000041643 Tmem263Q9DAM7 115 aa9.2□□□□□ -0.94
Pcif1-201ENSMUST00000041643 Ighv12-3A0A075B5T1 117 aa9.2□□□□□ -0.94
Pcif1-201ENSMUST00000041643 NrepQ07475 68 aa9.2□□□□□ -0.94
Pcif1-201ENSMUST00000041643 Try10Q792Z1 246 aaKnown RBP9.2□□□□□ -0.94
Pcif1-201ENSMUST00000041643 Tex48Q9DA81 110 aa9.2□□□□□ -0.94
Pcif1-201ENSMUST00000041643 Ighv1-12A0A0A6YXJ9 117 aa9.2□□□□□ -0.94
Pcif1-201ENSMUST00000041643 Lamtor2Q9JHS3 125 aa9.2□□□□□ -0.94
Pcif1-201ENSMUST00000041643 Trav8-1A0A075B641 109 aa9.2□□□□□ -0.94
Pcif1-201ENSMUST00000041643 Cdk2ap2Q9CPY4 127 aa9.2□□□□□ -0.94
Pcif1-201ENSMUST00000041643 Gp9O88186 177 aa9.19□□□□□ -0.94
Pcif1-201ENSMUST00000041643 Cd24P24807 76 aa9.19□□□□□ -0.94
Pcif1-201ENSMUST00000041643 Spag11Q8K4N2 71 aa9.19□□□□□ -0.94
Pcif1-201ENSMUST00000041643 Olfr975Q8VG91 310 aa9.19□□□□□ -0.94
Pcif1-201ENSMUST00000041643 CadB2RQC6 2225 aa9.19□□□□□ -0.94
Pcif1-201ENSMUST00000041643 Trav14d-1A0A075B6B1 121 aa9.19□□□□□ -0.94
Pcif1-201ENSMUST00000041643 Gm20517G3UVU6 152 aa9.19□□□□□ -0.94
Pcif1-201ENSMUST00000041643 Trav7d-3Q5R1I1 112 aa9.19□□□□□ -0.94
Pcif1-201ENSMUST00000041643 Olfr984Q8VFN1 314 aa9.19□□□□□ -0.94
Pcif1-201ENSMUST00000041643 Vamp8O70404 101 aa9.19□□□□□ -0.94
Pcif1-201ENSMUST00000041643 P01820 115 aa9.19□□□□□ -0.94
Pcif1-201ENSMUST00000041643 Tm2d1Q99MB3 208 aa9.19□□□□□ -0.94
Pcif1-201ENSMUST00000041643 PpbpQ9EQI5 113 aa9.19□□□□□ -0.94
Pcif1-201ENSMUST00000041643 Bak1O08734 209 aa9.19□□□□□ -0.94
Pcif1-201ENSMUST00000041643 9130213A22RikQ3V3T2 120 aa9.18□□□□□ -0.94
Pcif1-201ENSMUST00000041643 Trav14-3A0A075B607 120 aa9.18□□□□□ -0.94
Pcif1-201ENSMUST00000041643 Gm29289A0A087WPY7 166 aa9.18□□□□□ -0.94
Pcif1-201ENSMUST00000041643 Gm4064A0A087WR82 380 aa9.18□□□□□ -0.94
Pcif1-201ENSMUST00000041643 Gm10352B2RWR6 380 aa9.18□□□□□ -0.94
Pcif1-201ENSMUST00000041643 Gm21693J3QK27 380 aa9.18□□□□□ -0.94
Pcif1-201ENSMUST00000041643 Rbmy1a1O35698 380 aa9.18□□□□□ -0.94
Pcif1-201ENSMUST00000041643 Rnase1P00683 149 aa9.18□□□□□ -0.94
Pcif1-201ENSMUST00000041643 Mlst8Q9DCJ1 326 aa9.18□□□□□ -0.94
Pcif1-201ENSMUST00000041643 Gm28038F7BCN9 126 aa9.18□□□□□ -0.94
Pcif1-201ENSMUST00000041643 Pla2g2dQ9WVF6 144 aa9.18□□□□□ -0.94
Pcif1-201ENSMUST00000041643 Ssbp1Q9CYR0 152 aaKnown RBP9.18□□□□□ -0.94
Pcif1-201ENSMUST00000041643 V1ra8Q9EQ48 279 aa9.18□□□□□ -0.94
Pcif1-201ENSMUST00000041643 Cep250Q60952 2414 aa9.17□□□□□ -0.94
Pcif1-201ENSMUST00000041643 Znf575Q3TXZ1 239 aa9.17□□□□□ -0.94
Pcif1-201ENSMUST00000041643 Gm10188Q3V432 135 aa9.17□□□□□ -0.94
Pcif1-201ENSMUST00000041643 Megf10Q6DIB5 1147 aa9.17□□□□□ -0.94
Pcif1-201ENSMUST00000041643 Gm26558Q8BLW8 286 aa9.17□□□□□ -0.94
Pcif1-201ENSMUST00000041643 NpbQ8K4P1 119 aa9.17□□□□□ -0.94
Pcif1-201ENSMUST00000041643 Gnb1lQ9EQ15 326 aa9.17□□□□□ -0.94
Pcif1-201ENSMUST00000041643 Eml6Q5SQM0 1958 aa9.17□□□□□ -0.94
Pcif1-201ENSMUST00000041643 Gpx1P11352 201 aa9.17□□□□□ -0.94
Pcif1-201ENSMUST00000041643 Crip1P63254 77 aa9.17□□□□□ -0.94
Pcif1-201ENSMUST00000041643 GfyJ3KML8 504 aa9.17□□□□□ -0.94
Pcif1-201ENSMUST00000041643 Gm5150Q1AN92 299 aa9.17□□□□□ -0.94
Pcif1-201ENSMUST00000041643 Igkv4-71A0A0G2JEH0 117 aa9.17□□□□□ -0.94
Pcif1-201ENSMUST00000041643 Cox8bP48772 70 aa9.17□□□□□ -0.94
Pcif1-201ENSMUST00000041643 Cox6cQ9CPQ1 76 aa9.17□□□□□ -0.94
Pcif1-201ENSMUST00000041643 Trbv14A0A140T8L9 115 aa9.16□□□□□ -0.94
Pcif1-201ENSMUST00000041643 Sprr3O09116 238 aa9.16□□□□□ -0.94
Pcif1-201ENSMUST00000041643 Cks1bP61025 79 aa9.16□□□□□ -0.94
Pcif1-201ENSMUST00000041643 Gm20499D3Z4G5 72 aa9.16□□□□□ -0.94
Pcif1-201ENSMUST00000041643 Foxi3E0CZH3 425 aa9.16□□□□□ -0.94
Pcif1-201ENSMUST00000041643 Gm11020F6ZGD5 61 aa9.16□□□□□ -0.94
Pcif1-201ENSMUST00000041643 Tmem14cQ9CQN6 114 aa9.16□□□□□ -0.94
Pcif1-201ENSMUST00000041643 Klf13Q9JJZ6 289 aa9.16□□□□□ -0.94
Pcif1-201ENSMUST00000041643 TncQ80YX1 2110 aa9.16□□□□□ -0.94
Pcif1-201ENSMUST00000041643 Igkv4-57A0A0A6YYE7 117 aa9.16□□□□□ -0.94
Pcif1-201ENSMUST00000041643 Cited1P97769 203 aa9.16□□□□□ -0.94
Pcif1-201ENSMUST00000041643 Sdhaf1Q3U276 118 aa9.16□□□□□ -0.94
Retrieved 100 of 22,080 RNA–protein pairs in 57.1 ms