RNA–Protein interactions for RNA: ENSMUST00000015981.11

Sqstm1-201, Transcript of Sequestosome-1, mousemouse

TSL 1 (best) BASIC

Gene Sqstm1, Length 2,673 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sqstm1-201ENSMUST00000015981 Pygo1Q9D0P5 417 aa13.74□□□□□ -0.21
Sqstm1-201ENSMUST00000015981 Gm45717A0A1B0GT68 152 aa13.74□□□□□ -0.21
Sqstm1-201ENSMUST00000015981 PolP10400 120 aa13.74□□□□□ -0.21
Sqstm1-201ENSMUST00000015981 NrepQ07475 68 aa13.74□□□□□ -0.21
Sqstm1-201ENSMUST00000015981 TctaQ8VEA7 122 aa13.74□□□□□ -0.21
Sqstm1-201ENSMUST00000015981 Gm10277Q6R5C6 214 aa13.73□□□□□ -0.21
Sqstm1-201ENSMUST00000015981 Gm5105Q8C6Y9 112 aa13.73□□□□□ -0.21
Sqstm1-201ENSMUST00000015981 Plxdc1Q91ZV7 500 aa13.73□□□□□ -0.21
Sqstm1-201ENSMUST00000015981 Ighv1-55A0A075B5W6 117 aa13.73□□□□□ -0.21
Sqstm1-201ENSMUST00000015981 Ighv1-23A0A0A6YVW3 117 aa13.73□□□□□ -0.21
Sqstm1-201ENSMUST00000015981 E030018B13RikJ3QMS9 113 aa13.73□□□□□ -0.21
Sqstm1-201ENSMUST00000015981 Gm5294J3QP53 216 aa13.73□□□□□ -0.21
Sqstm1-201ENSMUST00000015981 A730015C16RikQ8C992 119 aa13.73□□□□□ -0.21
Sqstm1-201ENSMUST00000015981 Amn1B8JKV0 258 aa13.72□□□□□ -0.21
Sqstm1-201ENSMUST00000015981 Cxcl13O55038 109 aa13.72□□□□□ -0.21
Sqstm1-201ENSMUST00000015981 Gm12888Q3UW77 119 aa13.72□□□□□ -0.21
Sqstm1-201ENSMUST00000015981 Ndufb3Q9CQZ6 104 aa13.72□□□□□ -0.21
Sqstm1-201ENSMUST00000015981 Klk5Q9D140 293 aa13.72□□□□□ -0.21
Sqstm1-201ENSMUST00000015981 Timm23Q9WTQ8 209 aa13.72□□□□□ -0.21
Sqstm1-201ENSMUST00000015981 Defb45Q3V490 66 aa13.72□□□□□ -0.21
Sqstm1-201ENSMUST00000015981 Gm26938S4R185 226 aa13.72□□□□□ -0.21
Sqstm1-201ENSMUST00000015981 Col6a6Q8C6K9 2265 aa13.72□□□□□ -0.21
Sqstm1-201ENSMUST00000015981 Trav7n-5A0A075B604 112 aa13.71□□□□□ -0.21
Sqstm1-201ENSMUST00000015981 Gm44965A0A0N4SVR3 59 aa13.71□□□□□ -0.21
Sqstm1-201ENSMUST00000015981 Scgb1b24B1B0N6 92 aa13.71□□□□□ -0.21
Sqstm1-201ENSMUST00000015981 Ccl11P48298 97 aa13.71□□□□□ -0.21
Sqstm1-201ENSMUST00000015981 Cfc1P97766 202 aa13.71□□□□□ -0.21
Sqstm1-201ENSMUST00000015981 Mustn1Q99JI1 82 aa13.71□□□□□ -0.21
Sqstm1-201ENSMUST00000015981 AcanQ61282 2132 aaKnown RBP13.71□□□□□ -0.21
Sqstm1-201ENSMUST00000015981 Ighv14-2A0A075B5R7 117 aa13.71□□□□□ -0.22
Sqstm1-201ENSMUST00000015981 Brd3osA0A1B0GRB6 84 aa13.71□□□□□ -0.22
Sqstm1-201ENSMUST00000015981 Cd59aO55186 123 aa13.71□□□□□ -0.22
Sqstm1-201ENSMUST00000015981 P18527 97 aa13.71□□□□□ -0.22
Sqstm1-201ENSMUST00000015981 Gm6525A0A0A6YW33 106 aa13.7□□□□□ -0.22
Sqstm1-201ENSMUST00000015981 B1ARW8 110 aa13.7□□□□□ -0.22
Sqstm1-201ENSMUST00000015981 Trav19A0A0B4J1K4 119 aa13.7□□□□□ -0.22
Sqstm1-201ENSMUST00000015981 Nav2E9Q842 2432 aa13.7□□□□□ -0.22
Sqstm1-201ENSMUST00000015981 Akap9Q70FJ1 3797 aa13.69□□□□□ -0.22
Sqstm1-201ENSMUST00000015981 3100002H09RikQ9CXW6 140 aa13.69□□□□□ -0.22
Sqstm1-201ENSMUST00000015981 Ighv4-1A0A075B5R5 116 aa13.69□□□□□ -0.22
Sqstm1-201ENSMUST00000015981 P01837 106 aa13.68□□□□□ -0.22
Sqstm1-201ENSMUST00000015981 Hspe1Q64433 102 aaKnown RBP13.68□□□□□ -0.22
Sqstm1-201ENSMUST00000015981 Klhdc1Q80YG3 406 aa13.68□□□□□ -0.22
Sqstm1-201ENSMUST00000015981 Obp2aQ8K1H9 176 aa13.68□□□□□ -0.22
Sqstm1-201ENSMUST00000015981 Obox8V9GWY9 217 aa13.68□□□□□ -0.22
Sqstm1-201ENSMUST00000015981 Trav6-2Q5R1I4 113 aa13.67□□□□□ -0.22
Sqstm1-201ENSMUST00000015981 Gm4763Q8CFJ5 196 aa13.67□□□□□ -0.22
Sqstm1-201ENSMUST00000015981 Plac1Q9JI83 173 aa13.67□□□□□ -0.22
Sqstm1-201ENSMUST00000015981 Map1aQ9QYR6 2776 aa13.67□□□□□ -0.22
Sqstm1-201ENSMUST00000015981 MdfiP70331 251 aa13.67□□□□□ -0.22
Sqstm1-201ENSMUST00000015981 Olfr312Q7TRZ9 308 aa13.67□□□□□ -0.22
Sqstm1-201ENSMUST00000015981 Tspan13Q9D8C2 204 aa13.67□□□□□ -0.22
Sqstm1-201ENSMUST00000015981 HilpdaQ9JLS0 64 aa13.67□□□□□ -0.22
Sqstm1-201ENSMUST00000015981 Pradc1Q9D9N8 188 aa13.67□□□□□ -0.22
Sqstm1-201ENSMUST00000015981 Umad1E0CX23 159 aa13.66□□□□□ -0.22
Sqstm1-201ENSMUST00000015981 Fam240aJ3QNP9 97 aa13.66□□□□□ -0.22
Sqstm1-201ENSMUST00000015981 Gm10295Q8CCF3 114 aa13.66□□□□□ -0.22
Sqstm1-201ENSMUST00000015981 Prrc2aQ7TSC1 2158 aaKnown RBP13.66□□□□□ -0.22
Sqstm1-201ENSMUST00000015981 Ighv8-5A0A0A6YY60 119 aa13.66□□□□□ -0.22
Sqstm1-201ENSMUST00000015981 Srp14P16254 110 aaKnown RBP13.66□□□□□ -0.22
Sqstm1-201ENSMUST00000015981 Ube2d1P61080 147 aaKnown RBP13.66□□□□□ -0.22
Sqstm1-201ENSMUST00000015981 Gm5941Q497P9 117 aa13.66□□□□□ -0.22
Sqstm1-201ENSMUST00000015981 Ighv1-77A0A0G2JGS9 117 aa13.65□□□□□ -0.22
Sqstm1-201ENSMUST00000015981 Ccl6P27784 116 aa13.65□□□□□ -0.22
Sqstm1-201ENSMUST00000015981 Onecut1O08755 465 aa13.65□□□□□ -0.22
Sqstm1-201ENSMUST00000015981 Csn3P06796 181 aa13.65□□□□□ -0.22
Sqstm1-201ENSMUST00000015981 Khdc1cQ4KL78 166 aa13.65□□□□□ -0.22
Sqstm1-201ENSMUST00000015981 Prr13Q9CQJ5 137 aa13.65□□□□□ -0.22
Sqstm1-201ENSMUST00000015981 Srsf9Q9D0B0 222 aaKnown RBP13.65□□□□□ -0.22
Sqstm1-201ENSMUST00000015981 Ube2d3P61079 147 aa13.64□□□□□ -0.23
Sqstm1-201ENSMUST00000015981 Ube2d2P62838 147 aa13.64□□□□□ -0.23
Sqstm1-201ENSMUST00000015981 Cdx4Q07424 282 aa13.64□□□□□ -0.23
Sqstm1-201ENSMUST00000015981 Gm6040Q4QY32 63 aa13.64□□□□□ -0.23
Sqstm1-201ENSMUST00000015981 Ovol2Q8CIV7 274 aa13.64□□□□□ -0.23
Sqstm1-201ENSMUST00000015981 Ccl3P10855 92 aa13.63□□□□□ -0.23
Sqstm1-201ENSMUST00000015981 YrdcQ3U5F4 280 aa13.63□□□□□ -0.23
Sqstm1-201ENSMUST00000015981 RpeQ8VEE0 228 aa13.63□□□□□ -0.23
Sqstm1-201ENSMUST00000015981 Mrpl16Q99N93 251 aa13.63□□□□□ -0.23
Sqstm1-201ENSMUST00000015981 Gm20481G3UXK4 153 aa13.63□□□□□ -0.23
Sqstm1-201ENSMUST00000015981 TgfaP48030 159 aa13.63□□□□□ -0.23
Sqstm1-201ENSMUST00000015981 Nhlrc1Q8BR37 401 aa13.63□□□□□ -0.23
Sqstm1-201ENSMUST00000015981 Ighv14-1A0A075B5R4 117 aa13.62□□□□□ -0.23
Sqstm1-201ENSMUST00000015981 D930048N14RikA2AA67 225 aa13.62□□□□□ -0.23
Sqstm1-201ENSMUST00000015981 NdpP48744 131 aa13.62□□□□□ -0.23
Sqstm1-201ENSMUST00000015981 AW146154Q3TPQ7 468 aa13.62□□□□□ -0.23
Sqstm1-201ENSMUST00000015981 Cd52Q64389 74 aa13.62□□□□□ -0.23
Sqstm1-201ENSMUST00000015981 Gm16223Q8CBM3 117 aa13.62□□□□□ -0.23
Sqstm1-201ENSMUST00000015981 Foxi1Q922I5 372 aa13.62□□□□□ -0.23
Sqstm1-201ENSMUST00000015981 Ormdl2Q9CQZ0 153 aa13.62□□□□□ -0.23
Sqstm1-201ENSMUST00000015981 Arpc1aQ9R0Q6 370 aa13.62□□□□□ -0.23
Sqstm1-201ENSMUST00000015981 Igkv4-81A0A0G2JEY5 119 aa13.62□□□□□ -0.23
Sqstm1-201ENSMUST00000015981 P01802 115 aa13.62□□□□□ -0.23
Sqstm1-201ENSMUST00000015981 GlrxQ9QUH0 107 aa13.62□□□□□ -0.23
Sqstm1-201ENSMUST00000015981 Gm12845A0A0N4SUM5 588 aa13.61□□□□□ -0.23
Sqstm1-201ENSMUST00000015981 Tcrg-C3L7N479 172 aa13.61□□□□□ -0.23
Sqstm1-201ENSMUST00000015981 P03985 172 aa13.61□□□□□ -0.23
Sqstm1-201ENSMUST00000015981 Smrp1Q2MH31 260 aa13.61□□□□□ -0.23
Sqstm1-201ENSMUST00000015981 Gemin7Q9CWY4 129 aa13.61□□□□□ -0.23
Sqstm1-201ENSMUST00000015981 Tmem95P0DJF3 176 aa13.61□□□□□ -0.23
Sqstm1-201ENSMUST00000015981 Dtx1Q61010 627 aa13.61□□□□□ -0.23
Retrieved 100 of 22,080 RNA–protein pairs in 49.1 ms