RNA–Protein interactions for RNA: ENST00000641711.1

PHGDH-224, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 712 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-224ENST00000641711 SVIPQ8NHG7 77 aa5.46□□□□□ -1.54
PHGDH-224ENST00000641711 LINC01558Q9Y6Z2 57 aa5.45□□□□□ -1.54
PHGDH-224ENST00000641711 A8MUN3 132 aa5.44□□□□□ -1.54
PHGDH-224ENST00000641711 PSPHP1O15172 72 aa5.43□□□□□ -1.54
PHGDH-224ENST00000641711 Q5VV11 94 aa5.42□□□□□ -1.54
PHGDH-224ENST00000641711 CHKB-CPT1BH3BT56 60 aa5.41□□□□□ -1.54
PHGDH-224ENST00000641711 PRR15LQ9BU68 103 aa5.41□□□□□ -1.54
PHGDH-224ENST00000641711 MUC17Q685J3 4493 aa5.4□□□□□ -1.54
PHGDH-224ENST00000641711 SPINK7P58062 85 aa5.39□□□□□ -1.55
PHGDH-224ENST00000641711 ATP11AUNQ6ZP68 121 aa5.39□□□□□ -1.55
PHGDH-224ENST00000641711 PRO0628Q9UI54 55 aa5.39□□□□□ -1.55
PHGDH-224ENST00000641711 BRK1Q8WUW1 75 aa5.36□□□□□ -1.55
PHGDH-224ENST00000641711 RNF213Q63HN8 5207 aa5.34□□□□□ -1.55
PHGDH-224ENST00000641711 KRTAP3-1Q9BYR8 98 aa5.32□□□□□ -1.56
PHGDH-224ENST00000641711 COX6B2Q6YFQ2 88 aa5.31□□□□□ -1.56
PHGDH-224ENST00000641711 KRTAP4-1Q9BYQ7 146 aa5.3□□□□□ -1.56
PHGDH-224ENST00000641711 SPTSSBQ8NFR3 76 aa5.28□□□□□ -1.56
PHGDH-224ENST00000641711 A0A1B0GU69 56 aa5.27□□□□□ -1.57
PHGDH-224ENST00000641711 A6NED7 52 aa5.27□□□□□ -1.57
PHGDH-224ENST00000641711 CDC42SE1Q9NRR8 79 aa5.25□□□□□ -1.57
PHGDH-224ENST00000641711 MUC2Q02817 5179 aa5.25□□□□□ -1.57
PHGDH-224ENST00000641711 LCA10Q71F78 164 aa5.24□□□□□ -1.57
PHGDH-224ENST00000641711 KRTAP4-8Q9BYQ9 185 aa5.24□□□□□ -1.57
PHGDH-224ENST00000641711 A8MU10 97 aa5.19□□□□□ -1.58
PHGDH-224ENST00000641711 KRTAP19-2Q3LHN2 52 aa5.19□□□□□ -1.58
PHGDH-224ENST00000641711 SEC61GP60059 68 aa5.18□□□□□ -1.58
PHGDH-224ENST00000641711 SPATA8Q6RVD6 105 aa5.16□□□□□ -1.58
PHGDH-224ENST00000641711 RBM12B-AS1Q9P1G2 102 aa5.16□□□□□ -1.58
PHGDH-224ENST00000641711 UQCR11O14957 56 aa5.15□□□□□ -1.59
PHGDH-224ENST00000641711 FAT4Q6V0I7 4981 aa5.15□□□□□ -1.59
PHGDH-224ENST00000641711 KRTAP19-1Q8IUB9 90 aa5.14□□□□□ -1.59
PHGDH-224ENST00000641711 KRTAP4-12Q9BQ66 201 aa5.14□□□□□ -1.59
PHGDH-224ENST00000641711 KRTAP9-2Q9BYQ4 174 aa5.14□□□□□ -1.59
PHGDH-224ENST00000641711 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.12□□□□□ -1.59
PHGDH-224ENST00000641711 FLGP20930 4061 aaPredicted RBP5.12□□□□□ -1.59
PHGDH-224ENST00000641711 MIR22HGQ0VDD5 57 aa5.11□□□□□ -1.59
PHGDH-224ENST00000641711 H1FX-AS1Q4G0G2 97 aa5.11□□□□□ -1.59
PHGDH-224ENST00000641711 KRTAP9-6A0A140TA67 174 aa5.1□□□□□ -1.59
PHGDH-224ENST00000641711 S4R3F8 94 aa5.1□□□□□ -1.59
PHGDH-224ENST00000641711 MT1HP80294 61 aa5.09□□□□□ -1.59
PHGDH-224ENST00000641711 PMAIP1Q13794 54 aa5.09□□□□□ -1.59
PHGDH-224ENST00000641711 A6NN06 94 aa5.07□□□□□ -1.6
PHGDH-224ENST00000641711 A0A1B0GU33 70 aa5.06□□□□□ -1.6
PHGDH-224ENST00000641711 M0R2T5 61 aa5.02□□□□□ -1.61
PHGDH-224ENST00000641711 H0YAA0 97 aa5.01□□□□□ -1.61
PHGDH-224ENST00000641711 KRTAP10-6P60371 365 aaPredicted RBP5.01□□□□□ -1.61
PHGDH-224ENST00000641711 KRTAP19-4Q3LI73 84 aa4.98□□□□□ -1.61
PHGDH-224ENST00000641711 LCE3BQ5TA77 95 aa4.98□□□□□ -1.61
PHGDH-224ENST00000641711 CSAG1Q6PB30 78 aa4.97□□□□□ -1.61
PHGDH-224ENST00000641711 KTN1-AS1Q86SY8 53 aa4.96□□□□□ -1.62
PHGDH-224ENST00000641711 P0C880 135 aa4.9□□□□□ -1.63
PHGDH-224ENST00000641711 ADM2Q7Z4H4 148 aa4.9□□□□□ -1.63
PHGDH-224ENST00000641711 KRTAP9-9Q9BYP9 154 aa4.89□□□□□ -1.63
PHGDH-224ENST00000641711 KRTAP9-4Q9BYQ2 154 aa4.89□□□□□ -1.63
PHGDH-224ENST00000641711 KRTAP13-4Q3LI77 160 aa4.87□□□□□ -1.63
PHGDH-224ENST00000641711 LCE4AQ5TA78 99 aa4.85□□□□□ -1.63
PHGDH-224ENST00000641711 K7ERS5 55 aa4.84□□□□□ -1.63
PHGDH-224ENST00000641711 KRTAP9-8Q9BYQ0 159 aa4.84□□□□□ -1.63
PHGDH-224ENST00000641711 M0QZ58 72 aa4.83□□□□□ -1.64
PHGDH-224ENST00000641711 MT2AP02795 61 aa4.81□□□□□ -1.64
PHGDH-224ENST00000641711 KRTAP9-7A8MTY7 169 aa4.8□□□□□ -1.64
PHGDH-224ENST00000641711 A0A0D9SG42 100 aa4.76□□□□□ -1.65
PHGDH-224ENST00000641711 MT1FP04733 61 aa4.75□□□□□ -1.65
PHGDH-224ENST00000641711 KRTAP10-10P60014 251 aa4.75□□□□□ -1.65
PHGDH-224ENST00000641711 KRTAP4-8A0A0G2JLE6 195 aa4.74□□□□□ -1.65
PHGDH-224ENST00000641711 PRAC1Q96KF2 57 aa4.73□□□□□ -1.65
PHGDH-224ENST00000641711 KRTAP12-1P59990 96 aa4.72□□□□□ -1.65
PHGDH-224ENST00000641711 KRTAP12-2P59991 146 aa4.7□□□□□ -1.66
PHGDH-224ENST00000641711 ROMO1P60602 79 aa4.69□□□□□ -1.66
PHGDH-224ENST00000641711 KRTAP9-3Q9BYQ3 159 aa4.69□□□□□ -1.66
PHGDH-224ENST00000641711 R4GN34 69 aa4.69□□□□□ -1.66
PHGDH-224ENST00000641711 LCE1DQ5T752 114 aa4.68□□□□□ -1.66
PHGDH-224ENST00000641711 SPINT4Q6UDR6 99 aa4.64□□□□□ -1.67
PHGDH-224ENST00000641711 CRIPTQ9P021 101 aa4.64□□□□□ -1.67
PHGDH-224ENST00000641711 KRTAP25-1Q3LHN0 102 aa4.61□□□□□ -1.67
PHGDH-224ENST00000641711 KRTAP23-1A1A580 65 aa4.6□□□□□ -1.67
PHGDH-224ENST00000641711 CRCT1Q9UGL9 99 aa4.59□□□□□ -1.67
PHGDH-224ENST00000641711 LINC01554Q52M75 96 aa4.58□□□□□ -1.68
PHGDH-224ENST00000641711 SPRR2GQ9BYE4 73 aa4.58□□□□□ -1.68
PHGDH-224ENST00000641711 KRTAP4-7Q9BYR0 210 aa4.56□□□□□ -1.68
PHGDH-224ENST00000641711 KRTAP4-9Q9BYQ8 210 aa4.53□□□□□ -1.68
PHGDH-224ENST00000641711 KRTAP19-8Q3LI54 63 aa4.52□□□□□ -1.69
PHGDH-224ENST00000641711 LCE5AQ5TCM9 118 aa4.51□□□□□ -1.69
PHGDH-224ENST00000641711 USH2AO75445 5202 aa4.49□□□□□ -1.69
PHGDH-224ENST00000641711 FSIP2Q5CZC0 6907 aa4.49□□□□□ -1.69
PHGDH-224ENST00000641711 KRTAP19-6Q3LI70 58 aa4.46□□□□□ -1.7
PHGDH-224ENST00000641711 C10orf95Q9H7T3 257 aa4.45□□□□□ -1.7
PHGDH-224ENST00000641711 MT1BP07438 61 aa4.44□□□□□ -1.7
PHGDH-224ENST00000641711 CAMK2N1Q7Z7J9 78 aa4.42□□□□□ -1.7
PHGDH-224ENST00000641711 KRTAP4-11Q9BYQ6 195 aa4.4□□□□□ -1.71
PHGDH-224ENST00000641711 SSPOA2VEC9 5147 aa4.4□□□□□ -1.71
PHGDH-224ENST00000641711 KRTAP4-2Q9BYR5 136 aa4.37□□□□□ -1.71
PHGDH-224ENST00000641711 PLAC4Q8WY50 150 aa4.34□□□□□ -1.71
PHGDH-224ENST00000641711 FCGBPQ9Y6R7 5405 aaPredicted RBP4.32□□□□□ -1.72
PHGDH-224ENST00000641711 KRTAP10-5P60370 271 aa4.32□□□□□ -1.72
PHGDH-224ENST00000641711 PP632Q6XCG6 107 aa4.3□□□□□ -1.72
PHGDH-224ENST00000641711 PRO2289Q9P1D8 64 aa4.3□□□□□ -1.72
PHGDH-224ENST00000641711 TNP1P09430 55 aa4.27□□□□□ -1.73
PHGDH-224ENST00000641711 KRTAP15-1Q3LI76 137 aa4.26□□□□□ -1.73
PHGDH-224ENST00000641711 MT1XP80297 61 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 952.5 ms