RNA–Protein interactions for RNA: ENST00000589266.5

CIRBP-223, Transcript of cold inducible RNA binding protein, human

TSL 3

Gene CIRBP, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIRBP-223	ENST00000589266		A8MUN3	132 aa		12.41	□□□□□ -0.42
CIRBP-223	ENST00000589266	NDUFC1	O43677	76 aa		12.4	□□□□□ -0.42
CIRBP-223	ENST00000589266	SSPO	A2VEC9	5147 aa		12.36	□□□□□ -0.43
CIRBP-223	ENST00000589266	SPANXA2-OT1	Q8N9U9	137 aa		12.34	□□□□□ -0.43
CIRBP-223	ENST00000589266	CCDC179	H3BU77	68 aa		12.32	□□□□□ -0.44
CIRBP-223	ENST00000589266	USH2A	O75445	5202 aa		12.31	□□□□□ -0.44
CIRBP-223	ENST00000589266	DMAC1	Q96GE9	116 aa		12.3	□□□□□ -0.44
CIRBP-223	ENST00000589266		H7BZZ5	65 aa		12.26	□□□□□ -0.45
CIRBP-223	ENST00000589266	CYSTM1	Q9H1C7	97 aa		12.24	□□□□□ -0.45
CIRBP-223	ENST00000589266	FCGBP	Q9Y6R7	5405 aa	Predicted RBP	12.2	□□□□□ -0.46
CIRBP-223	ENST00000589266		S4R3F8	94 aa		12.2	□□□□□ -0.46
CIRBP-223	ENST00000589266	ACYP2	P14621	99 aa		12.17	□□□□□ -0.46
CIRBP-223	ENST00000589266	KRTAP9-8	Q9BYQ0	159 aa		12.14	□□□□□ -0.47
CIRBP-223	ENST00000589266	LCA10	Q71F78	164 aa		12.11	□□□□□ -0.47
CIRBP-223	ENST00000589266	CSAG1	Q6PB30	78 aa		12.04	□□□□□ -0.48
CIRBP-223	ENST00000589266	KRTAP19-1	Q8IUB9	90 aa		12.03	□□□□□ -0.48
CIRBP-223	ENST00000589266	KRTAP3-3	Q9BYR6	98 aa		12.03	□□□□□ -0.48
CIRBP-223	ENST00000589266	PCP4	P48539	62 aa		12.02	□□□□□ -0.49
CIRBP-223	ENST00000589266	ATP5E	P56381	51 aa	Predicted RBP	12.01	□□□□□ -0.49
CIRBP-223	ENST00000589266	TMEM258	P61165	79 aa		11.98	□□□□□ -0.49
CIRBP-223	ENST00000589266	SYNE2	Q8WXH0	6885 aa	Known RBP	11.98	□□□□□ -0.49
CIRBP-223	ENST00000589266	MACF1	Q9UPN3	7388 aa	Known RBP	11.93	□□□□□ -0.5
CIRBP-223	ENST00000589266	CHKB-CPT1B	H3BT56	60 aa		11.92	□□□□□ -0.5
CIRBP-223	ENST00000589266	LCE2B	O14633	110 aa		11.9	□□□□□ -0.5
CIRBP-223	ENST00000589266	SPTSSB	Q8NFR3	76 aa		11.89	□□□□□ -0.51
CIRBP-223	ENST00000589266	MT2A	P02795	61 aa		11.88	□□□□□ -0.51
CIRBP-223	ENST00000589266	COA5	Q86WW8	74 aa		11.88	□□□□□ -0.51
CIRBP-223	ENST00000589266	KRTAP9-3	Q9BYQ3	159 aa		11.79	□□□□□ -0.52
CIRBP-223	ENST00000589266	MT1F	P04733	61 aa		11.78	□□□□□ -0.52
CIRBP-223	ENST00000589266		H0YAA0	97 aa		11.75	□□□□□ -0.53
CIRBP-223	ENST00000589266	KRTAP10-10	P60014	251 aa		11.74	□□□□□ -0.53
CIRBP-223	ENST00000589266	KRTAP19-6	Q3LI70	58 aa		11.63	□□□□□ -0.55
CIRBP-223	ENST00000589266	SERP1	Q9Y6X1	66 aa		11.6	□□□□□ -0.55
CIRBP-223	ENST00000589266	KRTAP6-3	Q3LI67	103 aa		11.58	□□□□□ -0.56
CIRBP-223	ENST00000589266	ADM2	Q7Z4H4	148 aa		11.56	□□□□□ -0.56
CIRBP-223	ENST00000589266	KRTAP3-2	Q9BYR7	98 aa		11.48	□□□□□ -0.57
CIRBP-223	ENST00000589266	CRIPT	Q9P021	101 aa		11.47	□□□□□ -0.57
CIRBP-223	ENST00000589266	SEC61G	P60059	68 aa		11.4	□□□□□ -0.58
CIRBP-223	ENST00000589266		P0C880	135 aa		11.39	□□□□□ -0.59
CIRBP-223	ENST00000589266	RPS28	P62857	69 aa	Known RBP	11.37	□□□□□ -0.59
CIRBP-223	ENST00000589266	NEB	P20929	6669 aa		11.31	□□□□□ -0.6
CIRBP-223	ENST00000589266	SPRR2G	Q9BYE4	73 aa		11.29	□□□□□ -0.6
CIRBP-223	ENST00000589266	LINC01558	Q9Y6Z2	57 aa		11.29	□□□□□ -0.6
CIRBP-223	ENST00000589266		A0A1B0GU69	56 aa		11.27	□□□□□ -0.61
CIRBP-223	ENST00000589266	SMIM26	A0A096LP01	95 aa		11.23	□□□□□ -0.61
CIRBP-223	ENST00000589266	PRR15L	Q9BU68	103 aa		11.22	□□□□□ -0.61
CIRBP-223	ENST00000589266		R4GN34	69 aa		11.22	□□□□□ -0.61
CIRBP-223	ENST00000589266		V9GYY9	64 aa		11.21	□□□□□ -0.61
CIRBP-223	ENST00000589266		M0QZ58	72 aa		11.19	□□□□□ -0.62
CIRBP-223	ENST00000589266		Q1T7F1	81 aa		11.14	□□□□□ -0.63
CIRBP-223	ENST00000589266		A0A1B0GU33	70 aa		11.1	□□□□□ -0.63
CIRBP-223	ENST00000589266	KRTAP20-1	Q3LI63	56 aa		11.1	□□□□□ -0.63
CIRBP-223	ENST00000589266	MUC12	Q9UKN1	5478 aa		11.09	□□□□□ -0.63
CIRBP-223	ENST00000589266	KRTAP19-8	Q3LI54	63 aa		11.09	□□□□□ -0.63
CIRBP-223	ENST00000589266		Q5VV11	94 aa		11.06	□□□□□ -0.64
CIRBP-223	ENST00000589266	KRTAP13-4	Q3LI77	160 aa		10.97	□□□□□ -0.65
CIRBP-223	ENST00000589266	MT1B	P07438	61 aa		10.92	□□□□□ -0.66
CIRBP-223	ENST00000589266	LINC01554	Q52M75	96 aa		10.9	□□□□□ -0.66
CIRBP-223	ENST00000589266	PSPHP1	O15172	72 aa		10.88	□□□□□ -0.67
CIRBP-223	ENST00000589266		A6NN06	94 aa		10.87	□□□□□ -0.67
CIRBP-223	ENST00000589266	SPATA8	Q6RVD6	105 aa		10.87	□□□□□ -0.67
CIRBP-223	ENST00000589266	UQCR11	O14957	56 aa		10.85	□□□□□ -0.67
CIRBP-223	ENST00000589266	PLAC4	Q8WY50	150 aa		10.79	□□□□□ -0.68
CIRBP-223	ENST00000589266	KRTAP5-9	P26371	169 aa		10.71	□□□□□ -0.69
CIRBP-223	ENST00000589266		A0A0D9SG42	100 aa		10.7	□□□□□ -0.7
CIRBP-223	ENST00000589266	MDN1	Q9NU22	5596 aa		10.68	□□□□□ -0.7
CIRBP-223	ENST00000589266	KMT2D	O14686	5537 aa		10.68	□□□□□ -0.7
CIRBP-223	ENST00000589266	MIR22HG	Q0VDD5	57 aa		10.66	□□□□□ -0.7
CIRBP-223	ENST00000589266		A8MU10	97 aa		10.62	□□□□□ -0.71
CIRBP-223	ENST00000589266	KRTAP2-3	P0C7H8	128 aa		10.61	□□□□□ -0.71
CIRBP-223	ENST00000589266	KRTAP2-4	Q9BYR9	128 aa		10.61	□□□□□ -0.71
CIRBP-223	ENST00000589266		A6NED7	52 aa		10.6	□□□□□ -0.71
CIRBP-223	ENST00000589266	KRTAP12-1	P59990	96 aa		10.57	□□□□□ -0.72
CIRBP-223	ENST00000589266	KRTAP10-5	P60370	271 aa		10.54	□□□□□ -0.72
CIRBP-223	ENST00000589266	SPINT4	Q6UDR6	99 aa		10.53	□□□□□ -0.72
CIRBP-223	ENST00000589266	PRO2289	Q9P1D8	64 aa		10.49	□□□□□ -0.73
CIRBP-223	ENST00000589266	KRTAP12-2	P59991	146 aa		10.48	□□□□□ -0.73
CIRBP-223	ENST00000589266	MT1X	P80297	61 aa		10.44	□□□□□ -0.74
CIRBP-223	ENST00000589266	CAMK2N1	Q7Z7J9	78 aa		10.44	□□□□□ -0.74
CIRBP-223	ENST00000589266	CDC42SE1	Q9NRR8	79 aa		10.37	□□□□□ -0.75
CIRBP-223	ENST00000589266		K7ERS5	55 aa		10.34	□□□□□ -0.75
CIRBP-223	ENST00000589266	SPRR2E	P22531	72 aa		10.26	□□□□□ -0.77
CIRBP-223	ENST00000589266	SPRR2B	P35325	72 aa		10.26	□□□□□ -0.77
CIRBP-223	ENST00000589266	SPRR2A	P35326	72 aa		10.26	□□□□□ -0.77
CIRBP-223	ENST00000589266	SPRR2F	Q96RM1	72 aa		10.23	□□□□□ -0.77
CIRBP-223	ENST00000589266	KRTAP2-2	Q9BYT5	123 aa		10.22	□□□□□ -0.77
CIRBP-223	ENST00000589266	KRTAP2-1	Q9BYU5	128 aa		10.22	□□□□□ -0.77
CIRBP-223	ENST00000589266	BRK1	Q8WUW1	75 aa		10.04	□□□□□ -0.8
CIRBP-223	ENST00000589266	C10orf95	Q9H7T3	257 aa		10.03	□□□□□ -0.8
CIRBP-223	ENST00000589266	LCE1A	Q5T7P2	110 aa		10	□□□□□ -0.81
CIRBP-223	ENST00000589266	KRTAP10-12	P60413	245 aa		9.96	□□□□□ -0.82
CIRBP-223	ENST00000589266	KRTAP10-7	P60409	375 aa	Predicted RBP	9.95	□□□□□ -0.82
CIRBP-223	ENST00000589266	SPRR2D	P22532	72 aa		9.93	□□□□□ -0.82
CIRBP-223	ENST00000589266	KRTAP8-1	Q8IUC2	63 aa		9.93	□□□□□ -0.82
CIRBP-223	ENST00000589266	TNP1	P09430	55 aa		9.88	□□□□□ -0.83
CIRBP-223	ENST00000589266	ROMO1	P60602	79 aa		9.77	□□□□□ -0.85
CIRBP-223	ENST00000589266	KRTAP25-1	Q3LHN0	102 aa		9.77	□□□□□ -0.85
CIRBP-223	ENST00000589266	GPR98	Q8WXG9	6306 aa		9.73	□□□□□ -0.85
CIRBP-223	ENST00000589266	LCE3B	Q5TA77	95 aa		9.72	□□□□□ -0.85
CIRBP-223	ENST00000589266	KRTAP4-8	A0A0G2JLE6	195 aa		9.68	□□□□□ -0.86

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