RNA–Protein interactions for RNA: ENST00000588242.2

GCDH-207, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 2

Gene GCDH, Length 1,006 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-207ENST00000588242 KRTAP4-1Q9BYQ7 146 aa6.71□□□□□ -1.34
GCDH-207ENST00000588242 A8MUN3 132 aa6.69□□□□□ -1.34
GCDH-207ENST00000588242 CHKB-CPT1BH3BT56 60 aa6.66□□□□□ -1.34
GCDH-207ENST00000588242 V9GYY9 64 aa6.66□□□□□ -1.34
GCDH-207ENST00000588242 C4orf26Q17RF5 130 aa6.64□□□□□ -1.35
GCDH-207ENST00000588242 Q1T7F1 81 aa6.64□□□□□ -1.35
GCDH-207ENST00000588242 MPLKIPQ8TAP9 179 aa6.64□□□□□ -1.35
GCDH-207ENST00000588242 MUC2Q02817 5179 aa6.63□□□□□ -1.35
GCDH-207ENST00000588242 COX6B2Q6YFQ2 88 aa6.58□□□□□ -1.36
GCDH-207ENST00000588242 PRO0628Q9UI54 55 aa6.58□□□□□ -1.36
GCDH-207ENST00000588242 SPTSSBQ8NFR3 76 aa6.54□□□□□ -1.36
GCDH-207ENST00000588242 LINC01558Q9Y6Z2 57 aa6.53□□□□□ -1.36
GCDH-207ENST00000588242 KRTAP3-1Q9BYR8 98 aa6.52□□□□□ -1.37
GCDH-207ENST00000588242 PRR15LQ9BU68 103 aa6.5□□□□□ -1.37
GCDH-207ENST00000588242 KRTAP4-8Q9BYQ9 185 aa6.5□□□□□ -1.37
GCDH-207ENST00000588242 PSPHP1O15172 72 aa6.49□□□□□ -1.37
GCDH-207ENST00000588242 KRTAP19-2Q3LHN2 52 aa6.49□□□□□ -1.37
GCDH-207ENST00000588242 KRTAP9-2Q9BYQ4 174 aa6.49□□□□□ -1.37
GCDH-207ENST00000588242 FAT4Q6V0I7 4981 aa6.48□□□□□ -1.37
GCDH-207ENST00000588242 RBM12B-AS1Q9P1G2 102 aa6.45□□□□□ -1.38
GCDH-207ENST00000588242 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.43□□□□□ -1.38
GCDH-207ENST00000588242 Q5VV11 94 aa6.43□□□□□ -1.38
GCDH-207ENST00000588242 A0A1B0GU69 56 aa6.4□□□□□ -1.38
GCDH-207ENST00000588242 H1FX-AS1Q4G0G2 97 aa6.4□□□□□ -1.38
GCDH-207ENST00000588242 KRTAP9-6A0A140TA67 174 aa6.38□□□□□ -1.39
GCDH-207ENST00000588242 MT1HP80294 61 aa6.38□□□□□ -1.39
GCDH-207ENST00000588242 S4R3F8 94 aa6.38□□□□□ -1.39
GCDH-207ENST00000588242 SEC61GP60059 68 aa6.37□□□□□ -1.39
GCDH-207ENST00000588242 A6NED7 52 aa6.33□□□□□ -1.4
GCDH-207ENST00000588242 LCA10Q71F78 164 aa6.33□□□□□ -1.4
GCDH-207ENST00000588242 BRK1Q8WUW1 75 aa6.33□□□□□ -1.4
GCDH-207ENST00000588242 M0R2T5 61 aa6.32□□□□□ -1.4
GCDH-207ENST00000588242 UQCR11O14957 56 aa6.24□□□□□ -1.41
GCDH-207ENST00000588242 CSAG1Q6PB30 78 aa6.23□□□□□ -1.41
GCDH-207ENST00000588242 CDC42SE1Q9NRR8 79 aa6.23□□□□□ -1.41
GCDH-207ENST00000588242 FLGP20930 4061 aaPredicted RBP6.22□□□□□ -1.41
GCDH-207ENST00000588242 KRTAP10-6P60371 365 aaPredicted RBP6.21□□□□□ -1.42
GCDH-207ENST00000588242 PMAIP1Q13794 54 aa6.18□□□□□ -1.42
GCDH-207ENST00000588242 A0A1B0GU33 70 aa6.17□□□□□ -1.42
GCDH-207ENST00000588242 MIR22HGQ0VDD5 57 aa6.17□□□□□ -1.42
GCDH-207ENST00000588242 SPATA8Q6RVD6 105 aa6.16□□□□□ -1.42
GCDH-207ENST00000588242 LCE3BQ5TA77 95 aa6.14□□□□□ -1.43
GCDH-207ENST00000588242 KRTAP4-12Q9BQ66 201 aa6.14□□□□□ -1.43
GCDH-207ENST00000588242 A8MU10 97 aa6.11□□□□□ -1.43
GCDH-207ENST00000588242 H0YAA0 97 aa6.11□□□□□ -1.43
GCDH-207ENST00000588242 CRCT1Q9UGL9 99 aa6.11□□□□□ -1.43
GCDH-207ENST00000588242 ADM2Q7Z4H4 148 aa6.09□□□□□ -1.43
GCDH-207ENST00000588242 KRTAP9-9Q9BYP9 154 aa6.09□□□□□ -1.43
GCDH-207ENST00000588242 KRTAP9-4Q9BYQ2 154 aa6.09□□□□□ -1.43
GCDH-207ENST00000588242 KRTAP9-8Q9BYQ0 159 aa6.08□□□□□ -1.44
GCDH-207ENST00000588242 FSIP2Q5CZC0 6907 aa6.07□□□□□ -1.44
GCDH-207ENST00000588242 P0C880 135 aa6.04□□□□□ -1.44
GCDH-207ENST00000588242 MT2AP02795 61 aa6.03□□□□□ -1.44
GCDH-207ENST00000588242 KRTAP4-8A0A0G2JLE6 195 aa6□□□□□ -1.45
GCDH-207ENST00000588242 KTN1-AS1Q86SY8 53 aa6□□□□□ -1.45
GCDH-207ENST00000588242 MT1FP04733 61 aa5.98□□□□□ -1.45
GCDH-207ENST00000588242 KRTAP10-10P60014 251 aa5.98□□□□□ -1.45
GCDH-207ENST00000588242 M0QZ58 72 aa5.97□□□□□ -1.45
GCDH-207ENST00000588242 KRTAP19-1Q8IUB9 90 aa5.97□□□□□ -1.45
GCDH-207ENST00000588242 KRTAP13-4Q3LI77 160 aa5.94□□□□□ -1.46
GCDH-207ENST00000588242 A6NN06 94 aa5.93□□□□□ -1.46
GCDH-207ENST00000588242 K7ERS5 55 aa5.93□□□□□ -1.46
GCDH-207ENST00000588242 A0A0D9SG42 100 aa5.88□□□□□ -1.47
GCDH-207ENST00000588242 R4GN34 69 aa5.88□□□□□ -1.47
GCDH-207ENST00000588242 KRTAP9-3Q9BYQ3 159 aa5.87□□□□□ -1.47
GCDH-207ENST00000588242 CRIPTQ9P021 101 aa5.83□□□□□ -1.48
GCDH-207ENST00000588242 KRTAP4-7Q9BYR0 210 aa5.8□□□□□ -1.48
GCDH-207ENST00000588242 LINC01554Q52M75 96 aa5.76□□□□□ -1.49
GCDH-207ENST00000588242 KRTAP12-1P59990 96 aa5.75□□□□□ -1.49
GCDH-207ENST00000588242 LCE1DQ5T752 114 aa5.74□□□□□ -1.49
GCDH-207ENST00000588242 SPINT4Q6UDR6 99 aa5.74□□□□□ -1.49
GCDH-207ENST00000588242 KRTAP12-2P59991 146 aa5.73□□□□□ -1.49
GCDH-207ENST00000588242 SPRR2GQ9BYE4 73 aa5.7□□□□□ -1.5
GCDH-207ENST00000588242 KRTAP9-7A8MTY7 169 aa5.68□□□□□ -1.5
GCDH-207ENST00000588242 ROMO1P60602 79 aa5.66□□□□□ -1.5
GCDH-207ENST00000588242 USH2AO75445 5202 aa5.63□□□□□ -1.51
GCDH-207ENST00000588242 SSPOA2VEC9 5147 aa5.63□□□□□ -1.51
GCDH-207ENST00000588242 KRTAP4-9Q9BYQ8 210 aa5.62□□□□□ -1.51
GCDH-207ENST00000588242 KRTAP19-8Q3LI54 63 aa5.61□□□□□ -1.51
GCDH-207ENST00000588242 KRTAP4-2Q9BYR5 136 aa5.59□□□□□ -1.51
GCDH-207ENST00000588242 MT1BP07438 61 aa5.57□□□□□ -1.52
GCDH-207ENST00000588242 PRAC1Q96KF2 57 aa5.55□□□□□ -1.52
GCDH-207ENST00000588242 FCGBPQ9Y6R7 5405 aaPredicted RBP5.54□□□□□ -1.52
GCDH-207ENST00000588242 CAMK2N1Q7Z7J9 78 aa5.54□□□□□ -1.52
GCDH-207ENST00000588242 KRTAP19-6Q3LI70 58 aa5.53□□□□□ -1.52
GCDH-207ENST00000588242 PLAC4Q8WY50 150 aa5.5□□□□□ -1.53
GCDH-207ENST00000588242 H3BS24 57 aa5.47□□□□□ -1.53
GCDH-207ENST00000588242 KRTAP25-1Q3LHN0 102 aa5.45□□□□□ -1.54
GCDH-207ENST00000588242 C10orf95Q9H7T3 257 aa5.42□□□□□ -1.54
GCDH-207ENST00000588242 MACF1Q9UPN3 7388 aaKnown RBP5.41□□□□□ -1.54
GCDH-207ENST00000588242 LCE4AQ5TA78 99 aa5.4□□□□□ -1.54
GCDH-207ENST00000588242 KRTAP4-11Q9BYQ6 195 aa5.39□□□□□ -1.55
GCDH-207ENST00000588242 KRTAP10-5P60370 271 aa5.38□□□□□ -1.55
GCDH-207ENST00000588242 SYNE2Q8WXH0 6885 aaKnown RBP5.34□□□□□ -1.55
GCDH-207ENST00000588242 PRO2289Q9P1D8 64 aa5.32□□□□□ -1.56
GCDH-207ENST00000588242 TNP1P09430 55 aa5.29□□□□□ -1.56
GCDH-207ENST00000588242 MT1XP80297 61 aa5.29□□□□□ -1.56
GCDH-207ENST00000588242 KRTAP6-3Q3LI67 103 aa5.29□□□□□ -1.56
GCDH-207ENST00000588242 PP632Q6XCG6 107 aa5.23□□□□□ -1.57
GCDH-207ENST00000588242 KRTAP23-1A1A580 65 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms