RNA–Protein interactions for RNA: ENST00000578733.5

CDK5RAP3-210, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 578 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-210ENST00000578733 LORP23490 312 aaPredicted RBP5.5□□□□□ -1.53
CDK5RAP3-210ENST00000578733 SPANXA2-OT1Q8N9U9 137 aa5.5□□□□□ -1.53
CDK5RAP3-210ENST00000578733 DMAC1Q96GE9 116 aa5.5□□□□□ -1.53
CDK5RAP3-210ENST00000578733 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.48□□□□□ -1.53
CDK5RAP3-210ENST00000578733 ACYP2P14621 99 aa5.48□□□□□ -1.53
CDK5RAP3-210ENST00000578733 KRTAP10-6P60371 365 aaPredicted RBP5.48□□□□□ -1.53
CDK5RAP3-210ENST00000578733 CSAG1Q6PB30 78 aa5.47□□□□□ -1.53
CDK5RAP3-210ENST00000578733 LCA10Q71F78 164 aa5.46□□□□□ -1.54
CDK5RAP3-210ENST00000578733 CCDC179H3BU77 68 aa5.43□□□□□ -1.54
CDK5RAP3-210ENST00000578733 H7BZZ5 65 aa5.43□□□□□ -1.54
CDK5RAP3-210ENST00000578733 CHKB-CPT1BH3BT56 60 aa5.41□□□□□ -1.54
CDK5RAP3-210ENST00000578733 CYSTM1Q9H1C7 97 aa5.41□□□□□ -1.54
CDK5RAP3-210ENST00000578733 SPTSSBQ8NFR3 76 aa5.4□□□□□ -1.54
CDK5RAP3-210ENST00000578733 KRTAP3-3Q9BYR6 98 aa5.37□□□□□ -1.55
CDK5RAP3-210ENST00000578733 ATP5EP56381 51 aaPredicted RBP5.36□□□□□ -1.55
CDK5RAP3-210ENST00000578733 KRTAP9-8Q9BYQ0 159 aa5.33□□□□□ -1.56
CDK5RAP3-210ENST00000578733 TMEM258P61165 79 aa5.32□□□□□ -1.56
CDK5RAP3-210ENST00000578733 MT2AP02795 61 aa5.31□□□□□ -1.56
CDK5RAP3-210ENST00000578733 COA5Q86WW8 74 aa5.31□□□□□ -1.56
CDK5RAP3-210ENST00000578733 KRTAP10-10P60014 251 aa5.3□□□□□ -1.56
CDK5RAP3-210ENST00000578733 SSPOA2VEC9 5147 aa5.3□□□□□ -1.56
CDK5RAP3-210ENST00000578733 H0YAA0 97 aa5.29□□□□□ -1.56
CDK5RAP3-210ENST00000578733 PCP4P48539 62 aa5.28□□□□□ -1.56
CDK5RAP3-210ENST00000578733 USH2AO75445 5202 aa5.26□□□□□ -1.57
CDK5RAP3-210ENST00000578733 MT1FP04733 61 aa5.25□□□□□ -1.57
CDK5RAP3-210ENST00000578733 ADM2Q7Z4H4 148 aa5.23□□□□□ -1.57
CDK5RAP3-210ENST00000578733 FCGBPQ9Y6R7 5405 aaPredicted RBP5.21□□□□□ -1.58
CDK5RAP3-210ENST00000578733 CRIPTQ9P021 101 aa5.21□□□□□ -1.58
CDK5RAP3-210ENST00000578733 SEC61GP60059 68 aa5.18□□□□□ -1.58
CDK5RAP3-210ENST00000578733 KRTAP19-1Q8IUB9 90 aa5.15□□□□□ -1.59
CDK5RAP3-210ENST00000578733 KRTAP9-3Q9BYQ3 159 aa5.15□□□□□ -1.59
CDK5RAP3-210ENST00000578733 SERP1Q9Y6X1 66 aa5.14□□□□□ -1.59
CDK5RAP3-210ENST00000578733 KRTAP3-2Q9BYR7 98 aa5.11□□□□□ -1.59
CDK5RAP3-210ENST00000578733 R4GN34 69 aa5.11□□□□□ -1.59
CDK5RAP3-210ENST00000578733 P0C880 135 aa5.1□□□□□ -1.59
CDK5RAP3-210ENST00000578733 MACF1Q9UPN3 7388 aaKnown RBP5.1□□□□□ -1.59
CDK5RAP3-210ENST00000578733 PRR15LQ9BU68 103 aa5.08□□□□□ -1.6
CDK5RAP3-210ENST00000578733 SPRR2GQ9BYE4 73 aa5.08□□□□□ -1.6
CDK5RAP3-210ENST00000578733 SYNE2Q8WXH0 6885 aaKnown RBP5.07□□□□□ -1.6
CDK5RAP3-210ENST00000578733 A0A1B0GU69 56 aa5.07□□□□□ -1.6
CDK5RAP3-210ENST00000578733 M0QZ58 72 aa5.07□□□□□ -1.6
CDK5RAP3-210ENST00000578733 RPS28P62857 69 aaKnown RBP5.06□□□□□ -1.6
CDK5RAP3-210ENST00000578733 LCE2BO14633 110 aa5.05□□□□□ -1.6
CDK5RAP3-210ENST00000578733 KRTAP6-3Q3LI67 103 aa5.02□□□□□ -1.61
CDK5RAP3-210ENST00000578733 Q5VV11 94 aa5.02□□□□□ -1.61
CDK5RAP3-210ENST00000578733 LINC01558Q9Y6Z2 57 aa5.01□□□□□ -1.61
CDK5RAP3-210ENST00000578733 V9GYY9 64 aa5.01□□□□□ -1.61
CDK5RAP3-210ENST00000578733 KRTAP19-6Q3LI70 58 aa5□□□□□ -1.61
CDK5RAP3-210ENST00000578733 A0A1B0GU33 70 aa4.99□□□□□ -1.61
CDK5RAP3-210ENST00000578733 KRTAP19-8Q3LI54 63 aa4.98□□□□□ -1.61
CDK5RAP3-210ENST00000578733 SMIM26A0A096LP01 95 aa4.97□□□□□ -1.61
CDK5RAP3-210ENST00000578733 LINC01554Q52M75 96 aa4.97□□□□□ -1.61
CDK5RAP3-210ENST00000578733 Q1T7F1 81 aa4.94□□□□□ -1.62
CDK5RAP3-210ENST00000578733 PLAC4Q8WY50 150 aa4.94□□□□□ -1.62
CDK5RAP3-210ENST00000578733 MT1BP07438 61 aa4.9□□□□□ -1.63
CDK5RAP3-210ENST00000578733 A6NN06 94 aa4.88□□□□□ -1.63
CDK5RAP3-210ENST00000578733 KRTAP13-4Q3LI77 160 aa4.88□□□□□ -1.63
CDK5RAP3-210ENST00000578733 UQCR11O14957 56 aa4.87□□□□□ -1.63
CDK5RAP3-210ENST00000578733 SPATA8Q6RVD6 105 aa4.87□□□□□ -1.63
CDK5RAP3-210ENST00000578733 A0A0D9SG42 100 aa4.84□□□□□ -1.63
CDK5RAP3-210ENST00000578733 PSPHP1O15172 72 aa4.84□□□□□ -1.63
CDK5RAP3-210ENST00000578733 KRTAP20-1Q3LI63 56 aa4.84□□□□□ -1.63
CDK5RAP3-210ENST00000578733 PRO2289Q9P1D8 64 aa4.82□□□□□ -1.64
CDK5RAP3-210ENST00000578733 NEBP20929 6669 aa4.82□□□□□ -1.64
CDK5RAP3-210ENST00000578733 SPINT4Q6UDR6 99 aa4.78□□□□□ -1.64
CDK5RAP3-210ENST00000578733 MUC12Q9UKN1 5478 aa4.78□□□□□ -1.64
CDK5RAP3-210ENST00000578733 MIR22HGQ0VDD5 57 aa4.77□□□□□ -1.65
CDK5RAP3-210ENST00000578733 CAMK2N1Q7Z7J9 78 aa4.77□□□□□ -1.65
CDK5RAP3-210ENST00000578733 KRTAP10-5P60370 271 aa4.76□□□□□ -1.65
CDK5RAP3-210ENST00000578733 A6NED7 52 aa4.75□□□□□ -1.65
CDK5RAP3-210ENST00000578733 A8MU10 97 aa4.75□□□□□ -1.65
CDK5RAP3-210ENST00000578733 KRTAP12-1P59990 96 aa4.71□□□□□ -1.66
CDK5RAP3-210ENST00000578733 K7ERS5 55 aa4.7□□□□□ -1.66
CDK5RAP3-210ENST00000578733 KRTAP12-2P59991 146 aa4.68□□□□□ -1.66
CDK5RAP3-210ENST00000578733 MT1XP80297 61 aa4.68□□□□□ -1.66
CDK5RAP3-210ENST00000578733 KRTAP5-9P26371 169 aa4.62□□□□□ -1.67
CDK5RAP3-210ENST00000578733 KRTAP2-3P0C7H8 128 aa4.61□□□□□ -1.67
CDK5RAP3-210ENST00000578733 KRTAP2-4Q9BYR9 128 aa4.61□□□□□ -1.67
CDK5RAP3-210ENST00000578733 CDC42SE1Q9NRR8 79 aa4.6□□□□□ -1.67
CDK5RAP3-210ENST00000578733 MDN1Q9NU22 5596 aa4.56□□□□□ -1.68
CDK5RAP3-210ENST00000578733 KMT2DO14686 5537 aa4.56□□□□□ -1.68
CDK5RAP3-210ENST00000578733 TNP1P09430 55 aa4.48□□□□□ -1.69
CDK5RAP3-210ENST00000578733 KRTAP10-7P60409 375 aaPredicted RBP4.48□□□□□ -1.69
CDK5RAP3-210ENST00000578733 KRTAP10-12P60413 245 aa4.48□□□□□ -1.69
CDK5RAP3-210ENST00000578733 BRK1Q8WUW1 75 aa4.46□□□□□ -1.7
CDK5RAP3-210ENST00000578733 C10orf95Q9H7T3 257 aa4.46□□□□□ -1.7
CDK5RAP3-210ENST00000578733 KRTAP2-2Q9BYT5 123 aa4.44□□□□□ -1.7
CDK5RAP3-210ENST00000578733 KRTAP2-1Q9BYU5 128 aa4.44□□□□□ -1.7
CDK5RAP3-210ENST00000578733 KRTAP8-1Q8IUC2 63 aa4.42□□□□□ -1.7
CDK5RAP3-210ENST00000578733 SPRR2EP22531 72 aa4.41□□□□□ -1.7
CDK5RAP3-210ENST00000578733 SPRR2BP35325 72 aa4.41□□□□□ -1.7
CDK5RAP3-210ENST00000578733 SPRR2AP35326 72 aa4.41□□□□□ -1.7
CDK5RAP3-210ENST00000578733 KRTAP25-1Q3LHN0 102 aa4.39□□□□□ -1.71
CDK5RAP3-210ENST00000578733 LOC100996750A0A140TA64 210 aa4.37□□□□□ -1.71
CDK5RAP3-210ENST00000578733 ROMO1P60602 79 aa4.37□□□□□ -1.71
CDK5RAP3-210ENST00000578733 SPRR2FQ96RM1 72 aa4.37□□□□□ -1.71
CDK5RAP3-210ENST00000578733 KRTAP4-6Q9BYQ5 205 aa4.37□□□□□ -1.71
CDK5RAP3-210ENST00000578733 KRTAP4-8A0A0G2JLE6 195 aa4.36□□□□□ -1.71
CDK5RAP3-210ENST00000578733 KRTAP4-8Q9BYQ9 185 aa4.36□□□□□ -1.71
CDK5RAP3-210ENST00000578733 LCE1AQ5T7P2 110 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms