RNA–Protein interactions for RNA: ENST00000578733.5

CDK5RAP3-210, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 578 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-210ENST00000578733 LORP23490 312 aaPredicted RBP5.5□□□□□ -1.53
CDK5RAP3-210ENST00000578733 SPANXA2-OT1Q8N9U9 137 aa5.5□□□□□ -1.53
CDK5RAP3-210ENST00000578733 DMAC1Q96GE9 116 aa5.5□□□□□ -1.53
CDK5RAP3-210ENST00000578733 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.48□□□□□ -1.53
CDK5RAP3-210ENST00000578733 ACYP2P14621 99 aa5.48□□□□□ -1.53
CDK5RAP3-210ENST00000578733 KRTAP10-6P60371 365 aaPredicted RBP5.48□□□□□ -1.53
CDK5RAP3-210ENST00000578733 CSAG1Q6PB30 78 aa5.47□□□□□ -1.53
CDK5RAP3-210ENST00000578733 LCA10Q71F78 164 aa5.46□□□□□ -1.54
CDK5RAP3-210ENST00000578733 CCDC179H3BU77 68 aa5.43□□□□□ -1.54
CDK5RAP3-210ENST00000578733 H7BZZ5 65 aa5.43□□□□□ -1.54
CDK5RAP3-210ENST00000578733 CHKB-CPT1BH3BT56 60 aa5.41□□□□□ -1.54
CDK5RAP3-210ENST00000578733 CYSTM1Q9H1C7 97 aa5.41□□□□□ -1.54
CDK5RAP3-210ENST00000578733 SPTSSBQ8NFR3 76 aa5.4□□□□□ -1.54
CDK5RAP3-210ENST00000578733 KRTAP3-3Q9BYR6 98 aa5.37□□□□□ -1.55
CDK5RAP3-210ENST00000578733 ATP5EP56381 51 aaPredicted RBP5.36□□□□□ -1.55
CDK5RAP3-210ENST00000578733 KRTAP9-8Q9BYQ0 159 aa5.33□□□□□ -1.56
CDK5RAP3-210ENST00000578733 TMEM258P61165 79 aa5.32□□□□□ -1.56
CDK5RAP3-210ENST00000578733 MT2AP02795 61 aa5.31□□□□□ -1.56
CDK5RAP3-210ENST00000578733 COA5Q86WW8 74 aa5.31□□□□□ -1.56
CDK5RAP3-210ENST00000578733 KRTAP10-10P60014 251 aa5.3□□□□□ -1.56
CDK5RAP3-210ENST00000578733 SSPOA2VEC9 5147 aa5.3□□□□□ -1.56
CDK5RAP3-210ENST00000578733 H0YAA0 97 aa5.29□□□□□ -1.56
CDK5RAP3-210ENST00000578733 PCP4P48539 62 aa5.28□□□□□ -1.56
CDK5RAP3-210ENST00000578733 USH2AO75445 5202 aa5.26□□□□□ -1.57
CDK5RAP3-210ENST00000578733 MT1FP04733 61 aa5.25□□□□□ -1.57
CDK5RAP3-210ENST00000578733 ADM2Q7Z4H4 148 aa5.23□□□□□ -1.57
CDK5RAP3-210ENST00000578733 FCGBPQ9Y6R7 5405 aaPredicted RBP5.21□□□□□ -1.58
CDK5RAP3-210ENST00000578733 CRIPTQ9P021 101 aa5.21□□□□□ -1.58
CDK5RAP3-210ENST00000578733 SEC61GP60059 68 aa5.18□□□□□ -1.58
CDK5RAP3-210ENST00000578733 KRTAP19-1Q8IUB9 90 aa5.15□□□□□ -1.59
CDK5RAP3-210ENST00000578733 KRTAP9-3Q9BYQ3 159 aa5.15□□□□□ -1.59
CDK5RAP3-210ENST00000578733 SERP1Q9Y6X1 66 aa5.14□□□□□ -1.59
CDK5RAP3-210ENST00000578733 KRTAP3-2Q9BYR7 98 aa5.11□□□□□ -1.59
CDK5RAP3-210ENST00000578733 R4GN34 69 aa5.11□□□□□ -1.59
CDK5RAP3-210ENST00000578733 P0C880 135 aa5.1□□□□□ -1.59
CDK5RAP3-210ENST00000578733 MACF1Q9UPN3 7388 aaKnown RBP5.1□□□□□ -1.59
CDK5RAP3-210ENST00000578733 PRR15LQ9BU68 103 aa5.08□□□□□ -1.6
CDK5RAP3-210ENST00000578733 SPRR2GQ9BYE4 73 aa5.08□□□□□ -1.6
CDK5RAP3-210ENST00000578733 SYNE2Q8WXH0 6885 aaKnown RBP5.07□□□□□ -1.6
CDK5RAP3-210ENST00000578733 A0A1B0GU69 56 aa5.07□□□□□ -1.6
CDK5RAP3-210ENST00000578733 M0QZ58 72 aa5.07□□□□□ -1.6
CDK5RAP3-210ENST00000578733 RPS28P62857 69 aaKnown RBP5.06□□□□□ -1.6
CDK5RAP3-210ENST00000578733 LCE2BO14633 110 aa5.05□□□□□ -1.6
CDK5RAP3-210ENST00000578733 KRTAP6-3Q3LI67 103 aa5.02□□□□□ -1.61
CDK5RAP3-210ENST00000578733 Q5VV11 94 aa5.02□□□□□ -1.61
CDK5RAP3-210ENST00000578733 LINC01558Q9Y6Z2 57 aa5.01□□□□□ -1.61
CDK5RAP3-210ENST00000578733 V9GYY9 64 aa5.01□□□□□ -1.61
CDK5RAP3-210ENST00000578733 KRTAP19-6Q3LI70 58 aa5□□□□□ -1.61
CDK5RAP3-210ENST00000578733 A0A1B0GU33 70 aa4.99□□□□□ -1.61
CDK5RAP3-210ENST00000578733 KRTAP19-8Q3LI54 63 aa4.98□□□□□ -1.61
CDK5RAP3-210ENST00000578733 SMIM26A0A096LP01 95 aa4.97□□□□□ -1.61
CDK5RAP3-210ENST00000578733 LINC01554Q52M75 96 aa4.97□□□□□ -1.61
CDK5RAP3-210ENST00000578733 Q1T7F1 81 aa4.94□□□□□ -1.62
CDK5RAP3-210ENST00000578733 PLAC4Q8WY50 150 aa4.94□□□□□ -1.62
CDK5RAP3-210ENST00000578733 MT1BP07438 61 aa4.9□□□□□ -1.63
CDK5RAP3-210ENST00000578733 A6NN06 94 aa4.88□□□□□ -1.63
CDK5RAP3-210ENST00000578733 KRTAP13-4Q3LI77 160 aa4.88□□□□□ -1.63
CDK5RAP3-210ENST00000578733 UQCR11O14957 56 aa4.87□□□□□ -1.63
CDK5RAP3-210ENST00000578733 SPATA8Q6RVD6 105 aa4.87□□□□□ -1.63
CDK5RAP3-210ENST00000578733 A0A0D9SG42 100 aa4.84□□□□□ -1.63
CDK5RAP3-210ENST00000578733 PSPHP1O15172 72 aa4.84□□□□□ -1.63
CDK5RAP3-210ENST00000578733 KRTAP20-1Q3LI63 56 aa4.84□□□□□ -1.63
CDK5RAP3-210ENST00000578733 PRO2289Q9P1D8 64 aa4.82□□□□□ -1.64
CDK5RAP3-210ENST00000578733 NEBP20929 6669 aa4.82□□□□□ -1.64
CDK5RAP3-210ENST00000578733 SPINT4Q6UDR6 99 aa4.78□□□□□ -1.64
CDK5RAP3-210ENST00000578733 MUC12Q9UKN1 5478 aa4.78□□□□□ -1.64
CDK5RAP3-210ENST00000578733 MIR22HGQ0VDD5 57 aa4.77□□□□□ -1.65
CDK5RAP3-210ENST00000578733 CAMK2N1Q7Z7J9 78 aa4.77□□□□□ -1.65
CDK5RAP3-210ENST00000578733 KRTAP10-5P60370 271 aa4.76□□□□□ -1.65
CDK5RAP3-210ENST00000578733 A6NED7 52 aa4.75□□□□□ -1.65
CDK5RAP3-210ENST00000578733 A8MU10 97 aa4.75□□□□□ -1.65
CDK5RAP3-210ENST00000578733 KRTAP12-1P59990 96 aa4.71□□□□□ -1.66
CDK5RAP3-210ENST00000578733 K7ERS5 55 aa4.7□□□□□ -1.66
CDK5RAP3-210ENST00000578733 KRTAP12-2P59991 146 aa4.68□□□□□ -1.66
CDK5RAP3-210ENST00000578733 MT1XP80297 61 aa4.68□□□□□ -1.66
CDK5RAP3-210ENST00000578733 KRTAP5-9P26371 169 aa4.62□□□□□ -1.67
CDK5RAP3-210ENST00000578733 KRTAP2-3P0C7H8 128 aa4.61□□□□□ -1.67
CDK5RAP3-210ENST00000578733 KRTAP2-4Q9BYR9 128 aa4.61□□□□□ -1.67
CDK5RAP3-210ENST00000578733 CDC42SE1Q9NRR8 79 aa4.6□□□□□ -1.67
CDK5RAP3-210ENST00000578733 MDN1Q9NU22 5596 aa4.56□□□□□ -1.68
CDK5RAP3-210ENST00000578733 KMT2DO14686 5537 aa4.56□□□□□ -1.68
CDK5RAP3-210ENST00000578733 TNP1P09430 55 aa4.48□□□□□ -1.69
CDK5RAP3-210ENST00000578733 KRTAP10-7P60409 375 aaPredicted RBP4.48□□□□□ -1.69
CDK5RAP3-210ENST00000578733 KRTAP10-12P60413 245 aa4.48□□□□□ -1.69
CDK5RAP3-210ENST00000578733 BRK1Q8WUW1 75 aa4.46□□□□□ -1.7
CDK5RAP3-210ENST00000578733 C10orf95Q9H7T3 257 aa4.46□□□□□ -1.7
CDK5RAP3-210ENST00000578733 KRTAP2-2Q9BYT5 123 aa4.44□□□□□ -1.7
CDK5RAP3-210ENST00000578733 KRTAP2-1Q9BYU5 128 aa4.44□□□□□ -1.7
CDK5RAP3-210ENST00000578733 KRTAP8-1Q8IUC2 63 aa4.42□□□□□ -1.7
CDK5RAP3-210ENST00000578733 SPRR2EP22531 72 aa4.41□□□□□ -1.7
CDK5RAP3-210ENST00000578733 SPRR2BP35325 72 aa4.41□□□□□ -1.7
CDK5RAP3-210ENST00000578733 SPRR2AP35326 72 aa4.41□□□□□ -1.7
CDK5RAP3-210ENST00000578733 KRTAP25-1Q3LHN0 102 aa4.39□□□□□ -1.71
CDK5RAP3-210ENST00000578733 LOC100996750A0A140TA64 210 aa4.37□□□□□ -1.71
CDK5RAP3-210ENST00000578733 ROMO1P60602 79 aa4.37□□□□□ -1.71
CDK5RAP3-210ENST00000578733 SPRR2FQ96RM1 72 aa4.37□□□□□ -1.71
CDK5RAP3-210ENST00000578733 KRTAP4-6Q9BYQ5 205 aa4.37□□□□□ -1.71
CDK5RAP3-210ENST00000578733 KRTAP4-8A0A0G2JLE6 195 aa4.36□□□□□ -1.71
CDK5RAP3-210ENST00000578733 KRTAP4-8Q9BYQ9 185 aa4.36□□□□□ -1.71
CDK5RAP3-210ENST00000578733 LCE1AQ5T7P2 110 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms