RNA–Protein interactions for RNA: ENST00000573936.5

CHD3-216, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 749 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-216ENST00000573936 H1FX-AS1Q4G0G2 97 aa5.43□□□□□ -1.54
CHD3-216ENST00000573936 C1orf64Q8NEQ6 169 aa5.43□□□□□ -1.54
CHD3-216ENST00000573936 LINC00208Q96KT6 92 aa5.43□□□□□ -1.54
CHD3-216ENST00000573936 CYP4F30PQ9H0H9 118 aa5.42□□□□□ -1.54
CHD3-216ENST00000573936 SSPOA2VEC9 5147 aa5.42□□□□□ -1.54
CHD3-216ENST00000573936 H3BPC8 53 aa5.41□□□□□ -1.54
CHD3-216ENST00000573936 C4orf26Q17RF5 130 aa5.41□□□□□ -1.54
CHD3-216ENST00000573936 ANAPC13Q9BS18 74 aa5.38□□□□□ -1.55
CHD3-216ENST00000573936 COX7CP15954 63 aa5.37□□□□□ -1.55
CHD3-216ENST00000573936 KLKP1Q107X0 134 aa5.37□□□□□ -1.55
CHD3-216ENST00000573936 KRTAP4-7Q9BYR0 210 aa5.36□□□□□ -1.55
CHD3-216ENST00000573936 C20orf197Q8N268 126 aa5.35□□□□□ -1.55
CHD3-216ENST00000573936 KRTAP9-8Q9BYQ0 159 aa5.35□□□□□ -1.55
CHD3-216ENST00000573936 SNURFQ9Y675 71 aa5.34□□□□□ -1.55
CHD3-216ENST00000573936 FCGBPQ9Y6R7 5405 aaPredicted RBP5.31□□□□□ -1.56
CHD3-216ENST00000573936 KRTAP3-1Q9BYR8 98 aa5.31□□□□□ -1.56
CHD3-216ENST00000573936 SYNE2Q8WXH0 6885 aaKnown RBP5.3□□□□□ -1.56
CHD3-216ENST00000573936 S4R3F8 94 aa5.29□□□□□ -1.56
CHD3-216ENST00000573936 CCDC179H3BU77 68 aa5.28□□□□□ -1.56
CHD3-216ENST00000573936 MT2AP02795 61 aa5.28□□□□□ -1.56
CHD3-216ENST00000573936 KRTAP10-10P60014 251 aa5.27□□□□□ -1.57
CHD3-216ENST00000573936 CYSTM1Q9H1C7 97 aa5.27□□□□□ -1.57
CHD3-216ENST00000573936 KRTAP19-1Q8IUB9 90 aa5.25□□□□□ -1.57
CHD3-216ENST00000573936 A8MUN3 132 aa5.24□□□□□ -1.57
CHD3-216ENST00000573936 MT1FP04733 61 aa5.24□□□□□ -1.57
CHD3-216ENST00000573936 MACF1Q9UPN3 7388 aaKnown RBP5.23□□□□□ -1.57
CHD3-216ENST00000573936 LCE1DQ5T752 114 aa5.23□□□□□ -1.57
CHD3-216ENST00000573936 CSAG1Q6PB30 78 aa5.23□□□□□ -1.57
CHD3-216ENST00000573936 LCA10Q71F78 164 aa5.23□□□□□ -1.57
CHD3-216ENST00000573936 H7BZZ5 65 aa5.22□□□□□ -1.57
CHD3-216ENST00000573936 NDUFC1O43677 76 aa5.22□□□□□ -1.57
CHD3-216ENST00000573936 SPANXA2-OT1Q8N9U9 137 aa5.2□□□□□ -1.58
CHD3-216ENST00000573936 DMAC1Q96GE9 116 aa5.2□□□□□ -1.58
CHD3-216ENST00000573936 KRTAP9-3Q9BYQ3 159 aa5.18□□□□□ -1.58
CHD3-216ENST00000573936 PCP4P48539 62 aa5.15□□□□□ -1.59
CHD3-216ENST00000573936 ACYP2P14621 99 aa5.13□□□□□ -1.59
CHD3-216ENST00000573936 KRTAP4-9Q9BYQ8 210 aa5.13□□□□□ -1.59
CHD3-216ENST00000573936 KRTAP4-2Q9BYR5 136 aa5.13□□□□□ -1.59
CHD3-216ENST00000573936 TMEM258P61165 79 aa5.08□□□□□ -1.6
CHD3-216ENST00000573936 KRTAP6-3Q3LI67 103 aa5.08□□□□□ -1.6
CHD3-216ENST00000573936 H0YAA0 97 aa5.06□□□□□ -1.6
CHD3-216ENST00000573936 ATP5EP56381 51 aaPredicted RBP5.06□□□□□ -1.6
CHD3-216ENST00000573936 KRTAP19-6Q3LI70 58 aa5.06□□□□□ -1.6
CHD3-216ENST00000573936 COA5Q86WW8 74 aa5.05□□□□□ -1.6
CHD3-216ENST00000573936 CHKB-CPT1BH3BT56 60 aa5.03□□□□□ -1.6
CHD3-216ENST00000573936 CRIPTQ9P021 101 aa5.02□□□□□ -1.61
CHD3-216ENST00000573936 SPTSSBQ8NFR3 76 aa5□□□□□ -1.61
CHD3-216ENST00000573936 ADM2Q7Z4H4 148 aa4.98□□□□□ -1.61
CHD3-216ENST00000573936 SPRR2GQ9BYE4 73 aa4.98□□□□□ -1.61
CHD3-216ENST00000573936 KRTAP20-1Q3LI63 56 aa4.97□□□□□ -1.61
CHD3-216ENST00000573936 NEBP20929 6669 aa4.97□□□□□ -1.61
CHD3-216ENST00000573936 KRTAP5-3Q6L8H2 238 aa4.93□□□□□ -1.62
CHD3-216ENST00000573936 KRTAP19-8Q3LI54 63 aa4.92□□□□□ -1.62
CHD3-216ENST00000573936 Q5VV11 94 aa4.92□□□□□ -1.62
CHD3-216ENST00000573936 SERP1Q9Y6X1 66 aa4.92□□□□□ -1.62
CHD3-216ENST00000573936 P0C880 135 aa4.87□□□□□ -1.63
CHD3-216ENST00000573936 KRTAP4-11Q9BYQ6 195 aa4.87□□□□□ -1.63
CHD3-216ENST00000573936 R4GN34 69 aa4.87□□□□□ -1.63
CHD3-216ENST00000573936 MUC12Q9UKN1 5478 aa4.87□□□□□ -1.63
CHD3-216ENST00000573936 MT1BP07438 61 aa4.86□□□□□ -1.63
CHD3-216ENST00000573936 M0QZ58 72 aa4.82□□□□□ -1.64
CHD3-216ENST00000573936 RPS28P62857 69 aaKnown RBP4.8□□□□□ -1.64
CHD3-216ENST00000573936 A6NN06 94 aa4.79□□□□□ -1.64
CHD3-216ENST00000573936 SEC61GP60059 68 aa4.78□□□□□ -1.64
CHD3-216ENST00000573936 LINC01558Q9Y6Z2 57 aa4.78□□□□□ -1.64
CHD3-216ENST00000573936 A0A1B0GU69 56 aa4.77□□□□□ -1.65
CHD3-216ENST00000573936 PLAC4Q8WY50 150 aa4.76□□□□□ -1.65
CHD3-216ENST00000573936 SMIM26A0A096LP01 95 aa4.75□□□□□ -1.65
CHD3-216ENST00000573936 KRTAP10-5P60370 271 aa4.74□□□□□ -1.65
CHD3-216ENST00000573936 MDN1Q9NU22 5596 aa4.73□□□□□ -1.65
CHD3-216ENST00000573936 Q1T7F1 81 aa4.72□□□□□ -1.65
CHD3-216ENST00000573936 LINC01554Q52M75 96 aa4.72□□□□□ -1.65
CHD3-216ENST00000573936 KRTAP2-3P0C7H8 128 aa4.71□□□□□ -1.66
CHD3-216ENST00000573936 PRR15LQ9BU68 103 aa4.71□□□□□ -1.66
CHD3-216ENST00000573936 KRTAP2-4Q9BYR9 128 aa4.71□□□□□ -1.66
CHD3-216ENST00000573936 V9GYY9 64 aa4.7□□□□□ -1.66
CHD3-216ENST00000573936 KMT2DO14686 5537 aa4.69□□□□□ -1.66
CHD3-216ENST00000573936 A0A1B0GU33 70 aa4.69□□□□□ -1.66
CHD3-216ENST00000573936 KRTAP13-4Q3LI77 160 aa4.69□□□□□ -1.66
CHD3-216ENST00000573936 PRO2289Q9P1D8 64 aa4.69□□□□□ -1.66
CHD3-216ENST00000573936 PSPHP1O15172 72 aa4.65□□□□□ -1.67
CHD3-216ENST00000573936 KRTAP5-9P26371 169 aa4.64□□□□□ -1.67
CHD3-216ENST00000573936 SPATA8Q6RVD6 105 aa4.64□□□□□ -1.67
CHD3-216ENST00000573936 MT1XP80297 61 aa4.6□□□□□ -1.67
CHD3-216ENST00000573936 UQCR11O14957 56 aa4.58□□□□□ -1.68
CHD3-216ENST00000573936 A0A0D9SG42 100 aa4.57□□□□□ -1.68
CHD3-216ENST00000573936 A8MU10 97 aa4.55□□□□□ -1.68
CHD3-216ENST00000573936 LCE4AQ5TA78 99 aa4.52□□□□□ -1.69
CHD3-216ENST00000573936 KRTAP2-2Q9BYT5 123 aa4.52□□□□□ -1.69
CHD3-216ENST00000573936 KRTAP2-1Q9BYU5 128 aa4.52□□□□□ -1.69
CHD3-216ENST00000573936 SPRR2EP22531 72 aa4.51□□□□□ -1.69
CHD3-216ENST00000573936 SPRR2BP35325 72 aa4.51□□□□□ -1.69
CHD3-216ENST00000573936 SPRR2AP35326 72 aa4.51□□□□□ -1.69
CHD3-216ENST00000573936 MIR22HGQ0VDD5 57 aa4.51□□□□□ -1.69
CHD3-216ENST00000573936 A6NED7 52 aa4.5□□□□□ -1.69
CHD3-216ENST00000573936 KRTAP12-1P59990 96 aa4.5□□□□□ -1.69
CHD3-216ENST00000573936 KRTAP12-2P59991 146 aa4.5□□□□□ -1.69
CHD3-216ENST00000573936 CAMK2N1Q7Z7J9 78 aa4.5□□□□□ -1.69
CHD3-216ENST00000573936 SPRR2FQ96RM1 72 aa4.5□□□□□ -1.69
CHD3-216ENST00000573936 LCE5AQ5TCM9 118 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms