RNA–Protein interactions for RNA: ENST00000569252.5

USB1-215, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 573 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-215ENST00000569252 SNURFQ9Y675 71 aa7.89□□□□□ -1.15
USB1-215ENST00000569252 A8MUN3 132 aa7.87□□□□□ -1.15
USB1-215ENST00000569252 KRTAP3-1Q9BYR8 98 aa7.86□□□□□ -1.15
USB1-215ENST00000569252 S4R3F8 94 aa7.84□□□□□ -1.15
USB1-215ENST00000569252 NDUFC1O43677 76 aa7.77□□□□□ -1.17
USB1-215ENST00000569252 FCGBPQ9Y6R7 5405 aaPredicted RBP7.75□□□□□ -1.17
USB1-215ENST00000569252 ACYP2P14621 99 aa7.75□□□□□ -1.17
USB1-215ENST00000569252 CSAG1Q6PB30 78 aa7.75□□□□□ -1.17
USB1-215ENST00000569252 LCA10Q71F78 164 aa7.74□□□□□ -1.17
USB1-215ENST00000569252 DMAC1Q96GE9 116 aa7.74□□□□□ -1.17
USB1-215ENST00000569252 KRTAP9-8Q9BYQ0 159 aa7.73□□□□□ -1.17
USB1-215ENST00000569252 SPANXA2-OT1Q8N9U9 137 aa7.72□□□□□ -1.17
USB1-215ENST00000569252 SYNE2Q8WXH0 6885 aaKnown RBP7.7□□□□□ -1.18
USB1-215ENST00000569252 KRTAP19-1Q8IUB9 90 aa7.65□□□□□ -1.18
USB1-215ENST00000569252 MACF1Q9UPN3 7388 aaKnown RBP7.65□□□□□ -1.19
USB1-215ENST00000569252 CHKB-CPT1BH3BT56 60 aa7.64□□□□□ -1.19
USB1-215ENST00000569252 CCDC179H3BU77 68 aa7.64□□□□□ -1.19
USB1-215ENST00000569252 H7BZZ5 65 aa7.61□□□□□ -1.19
USB1-215ENST00000569252 LCE2BO14633 110 aa7.61□□□□□ -1.19
USB1-215ENST00000569252 SPTSSBQ8NFR3 76 aa7.61□□□□□ -1.19
USB1-215ENST00000569252 KRTAP3-3Q9BYR6 98 aa7.61□□□□□ -1.19
USB1-215ENST00000569252 MT2AP02795 61 aa7.6□□□□□ -1.19
USB1-215ENST00000569252 KRTAP10-10P60014 251 aa7.59□□□□□ -1.19
USB1-215ENST00000569252 MT1FP04733 61 aa7.57□□□□□ -1.2
USB1-215ENST00000569252 CYSTM1Q9H1C7 97 aa7.57□□□□□ -1.2
USB1-215ENST00000569252 ATP5EP56381 51 aaPredicted RBP7.49□□□□□ -1.21
USB1-215ENST00000569252 KRTAP9-3Q9BYQ3 159 aa7.49□□□□□ -1.21
USB1-215ENST00000569252 COA5Q86WW8 74 aa7.48□□□□□ -1.21
USB1-215ENST00000569252 H0YAA0 97 aa7.45□□□□□ -1.22
USB1-215ENST00000569252 TMEM258P61165 79 aa7.44□□□□□ -1.22
USB1-215ENST00000569252 ADM2Q7Z4H4 148 aa7.43□□□□□ -1.22
USB1-215ENST00000569252 PCP4P48539 62 aa7.37□□□□□ -1.23
USB1-215ENST00000569252 CRIPTQ9P021 101 aa7.36□□□□□ -1.23
USB1-215ENST00000569252 SEC61GP60059 68 aa7.32□□□□□ -1.24
USB1-215ENST00000569252 KRTAP19-6Q3LI70 58 aa7.3□□□□□ -1.24
USB1-215ENST00000569252 SERP1Q9Y6X1 66 aa7.28□□□□□ -1.24
USB1-215ENST00000569252 NEBP20929 6669 aa7.25□□□□□ -1.25
USB1-215ENST00000569252 P0C880 135 aa7.24□□□□□ -1.25
USB1-215ENST00000569252 R4GN34 69 aa7.24□□□□□ -1.25
USB1-215ENST00000569252 KRTAP3-2Q9BYR7 98 aa7.22□□□□□ -1.25
USB1-215ENST00000569252 KRTAP6-3Q3LI67 103 aa7.2□□□□□ -1.26
USB1-215ENST00000569252 SPRR2GQ9BYE4 73 aa7.2□□□□□ -1.26
USB1-215ENST00000569252 M0QZ58 72 aa7.17□□□□□ -1.26
USB1-215ENST00000569252 A0A1B0GU69 56 aa7.16□□□□□ -1.26
USB1-215ENST00000569252 Q5VV11 94 aa7.13□□□□□ -1.27
USB1-215ENST00000569252 PRR15LQ9BU68 103 aa7.13□□□□□ -1.27
USB1-215ENST00000569252 MUC12Q9UKN1 5478 aa7.07□□□□□ -1.28
USB1-215ENST00000569252 LINC01554Q52M75 96 aa7.07□□□□□ -1.28
USB1-215ENST00000569252 A0A1B0GU33 70 aa7.06□□□□□ -1.28
USB1-215ENST00000569252 KRTAP19-8Q3LI54 63 aa7.06□□□□□ -1.28
USB1-215ENST00000569252 LINC01558Q9Y6Z2 57 aa7.05□□□□□ -1.28
USB1-215ENST00000569252 V9GYY9 64 aa7.03□□□□□ -1.28
USB1-215ENST00000569252 PLAC4Q8WY50 150 aa7.02□□□□□ -1.29
USB1-215ENST00000569252 RPS28P62857 69 aaKnown RBP6.99□□□□□ -1.29
USB1-215ENST00000569252 SMIM26A0A096LP01 95 aa6.97□□□□□ -1.29
USB1-215ENST00000569252 MT1BP07438 61 aa6.96□□□□□ -1.3
USB1-215ENST00000569252 KRTAP20-1Q3LI63 56 aa6.92□□□□□ -1.3
USB1-215ENST00000569252 Q1T7F1 81 aa6.91□□□□□ -1.3
USB1-215ENST00000569252 SPATA8Q6RVD6 105 aa6.91□□□□□ -1.3
USB1-215ENST00000569252 KRTAP13-4Q3LI77 160 aa6.9□□□□□ -1.3
USB1-215ENST00000569252 A0A0D9SG42 100 aa6.88□□□□□ -1.31
USB1-215ENST00000569252 A6NN06 94 aa6.87□□□□□ -1.31
USB1-215ENST00000569252 UQCR11O14957 56 aa6.86□□□□□ -1.31
USB1-215ENST00000569252 PSPHP1O15172 72 aa6.84□□□□□ -1.31
USB1-215ENST00000569252 PRO2289Q9P1D8 64 aa6.82□□□□□ -1.32
USB1-215ENST00000569252 SPINT4Q6UDR6 99 aa6.79□□□□□ -1.32
USB1-215ENST00000569252 KMT2DO14686 5537 aa6.78□□□□□ -1.32
USB1-215ENST00000569252 MDN1Q9NU22 5596 aa6.78□□□□□ -1.32
USB1-215ENST00000569252 KRTAP10-5P60370 271 aa6.76□□□□□ -1.33
USB1-215ENST00000569252 CAMK2N1Q7Z7J9 78 aa6.76□□□□□ -1.33
USB1-215ENST00000569252 A8MU10 97 aa6.73□□□□□ -1.33
USB1-215ENST00000569252 MIR22HGQ0VDD5 57 aa6.73□□□□□ -1.33
USB1-215ENST00000569252 KRTAP5-9P26371 169 aa6.69□□□□□ -1.34
USB1-215ENST00000569252 A6NED7 52 aa6.68□□□□□ -1.34
USB1-215ENST00000569252 KRTAP12-1P59990 96 aa6.67□□□□□ -1.34
USB1-215ENST00000569252 MT1XP80297 61 aa6.65□□□□□ -1.34
USB1-215ENST00000569252 KRTAP12-2P59991 146 aa6.63□□□□□ -1.35
USB1-215ENST00000569252 K7ERS5 55 aa6.62□□□□□ -1.35
USB1-215ENST00000569252 KRTAP2-3P0C7H8 128 aa6.57□□□□□ -1.36
USB1-215ENST00000569252 KRTAP2-4Q9BYR9 128 aa6.57□□□□□ -1.36
USB1-215ENST00000569252 SPRR2EP22531 72 aa6.49□□□□□ -1.37
USB1-215ENST00000569252 SPRR2BP35325 72 aa6.49□□□□□ -1.37
USB1-215ENST00000569252 SPRR2AP35326 72 aa6.49□□□□□ -1.37
USB1-215ENST00000569252 SPRR2FQ96RM1 72 aa6.48□□□□□ -1.37
USB1-215ENST00000569252 CDC42SE1Q9NRR8 79 aa6.44□□□□□ -1.38
USB1-215ENST00000569252 KRTAP10-7P60409 375 aaPredicted RBP6.37□□□□□ -1.39
USB1-215ENST00000569252 KRTAP10-12P60413 245 aa6.34□□□□□ -1.39
USB1-215ENST00000569252 LCE1AQ5T7P2 110 aa6.34□□□□□ -1.39
USB1-215ENST00000569252 TNP1P09430 55 aa6.33□□□□□ -1.4
USB1-215ENST00000569252 KRTAP2-2Q9BYT5 123 aa6.33□□□□□ -1.4
USB1-215ENST00000569252 KRTAP2-1Q9BYU5 128 aa6.33□□□□□ -1.4
USB1-215ENST00000569252 C10orf95Q9H7T3 257 aa6.33□□□□□ -1.4
USB1-215ENST00000569252 KRTAP8-1Q8IUC2 63 aa6.29□□□□□ -1.4
USB1-215ENST00000569252 SPRR2DP22532 72 aa6.26□□□□□ -1.41
USB1-215ENST00000569252 BRK1Q8WUW1 75 aa6.26□□□□□ -1.41
USB1-215ENST00000569252 KRTAP4-8A0A0G2JLE6 195 aa6.23□□□□□ -1.41
USB1-215ENST00000569252 KRTAP4-8Q9BYQ9 185 aa6.23□□□□□ -1.41
USB1-215ENST00000569252 GPR98Q8WXG9 6306 aa6.18□□□□□ -1.42
USB1-215ENST00000569252 KRTAP25-1Q3LHN0 102 aa6.18□□□□□ -1.42
USB1-215ENST00000569252 ROMO1P60602 79 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms