RNA–Protein interactions for RNA: ENST00000559774.6

LRRC28-215, Transcript of leucine rich repeat containing 28, humanhuman

TSL 2

Gene LRRC28, Length 624 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-215ENST00000559774 FLGP20930 4061 aaPredicted RBP4.31□□□□□ -1.72
LRRC28-215ENST00000559774 A8MUN3 132 aa4.29□□□□□ -1.72
LRRC28-215ENST00000559774 KLKP1Q107X0 134 aa4.28□□□□□ -1.72
LRRC28-215ENST00000559774 M0R2T5 61 aa4.27□□□□□ -1.73
LRRC28-215ENST00000559774 COX7CP15954 63 aa4.27□□□□□ -1.73
LRRC28-215ENST00000559774 KRTAP3-1Q9BYR8 98 aa4.27□□□□□ -1.73
LRRC28-215ENST00000559774 C20orf197Q8N268 126 aa4.24□□□□□ -1.73
LRRC28-215ENST00000559774 ANAPC13Q9BS18 74 aa4.24□□□□□ -1.73
LRRC28-215ENST00000559774 KRTAP10-6P60371 365 aaPredicted RBP4.22□□□□□ -1.73
LRRC28-215ENST00000559774 SPANXA2-OT1Q8N9U9 137 aa4.22□□□□□ -1.73
LRRC28-215ENST00000559774 DMAC1Q96GE9 116 aa4.22□□□□□ -1.73
LRRC28-215ENST00000559774 SNURFQ9Y675 71 aa4.22□□□□□ -1.73
LRRC28-215ENST00000559774 NDUFC1O43677 76 aa4.21□□□□□ -1.74
LRRC28-215ENST00000559774 LCE1DQ5T752 114 aa4.21□□□□□ -1.74
LRRC28-215ENST00000559774 S4R3F8 94 aa4.21□□□□□ -1.74
LRRC28-215ENST00000559774 ACYP2P14621 99 aa4.18□□□□□ -1.74
LRRC28-215ENST00000559774 CSAG1Q6PB30 78 aa4.18□□□□□ -1.74
LRRC28-215ENST00000559774 LCA10Q71F78 164 aa4.18□□□□□ -1.74
LRRC28-215ENST00000559774 KRTAP4-7Q9BYR0 210 aa4.18□□□□□ -1.74
LRRC28-215ENST00000559774 KRTAP9-8Q9BYQ0 159 aa4.15□□□□□ -1.75
LRRC28-215ENST00000559774 H7BZZ5 65 aa4.14□□□□□ -1.75
LRRC28-215ENST00000559774 LCE4AQ5TA78 99 aa4.13□□□□□ -1.75
LRRC28-215ENST00000559774 H0YAA0 97 aa4.1□□□□□ -1.75
LRRC28-215ENST00000559774 CCDC179H3BU77 68 aa4.1□□□□□ -1.75
LRRC28-215ENST00000559774 MT2AP02795 61 aa4.1□□□□□ -1.75
LRRC28-215ENST00000559774 SPTSSBQ8NFR3 76 aa4.1□□□□□ -1.75
LRRC28-215ENST00000559774 KRTAP4-9Q9BYQ8 210 aa4.1□□□□□ -1.75
LRRC28-215ENST00000559774 CYSTM1Q9H1C7 97 aa4.09□□□□□ -1.75
LRRC28-215ENST00000559774 H3BS24 57 aa4.07□□□□□ -1.76
LRRC28-215ENST00000559774 CHKB-CPT1BH3BT56 60 aa4.07□□□□□ -1.76
LRRC28-215ENST00000559774 ATP5EP56381 51 aaPredicted RBP4.07□□□□□ -1.76
LRRC28-215ENST00000559774 KRTAP10-10P60014 251 aa4.07□□□□□ -1.76
LRRC28-215ENST00000559774 MT1FP04733 61 aa4.06□□□□□ -1.76
LRRC28-215ENST00000559774 KRTAP9-7A8MTY7 169 aa4.05□□□□□ -1.76
LRRC28-215ENST00000559774 KRTAP19-4Q3LI73 84 aa4.05□□□□□ -1.76
LRRC28-215ENST00000559774 TMEM258P61165 79 aa4.03□□□□□ -1.76
LRRC28-215ENST00000559774 COA5Q86WW8 74 aa4.03□□□□□ -1.76
LRRC28-215ENST00000559774 CRIPTQ9P021 101 aa4.02□□□□□ -1.77
LRRC28-215ENST00000559774 KRTAP9-3Q9BYQ3 159 aa4.01□□□□□ -1.77
LRRC28-215ENST00000559774 KRTAP4-2Q9BYR5 136 aa4.01□□□□□ -1.77
LRRC28-215ENST00000559774 ADM2Q7Z4H4 148 aa3.97□□□□□ -1.77
LRRC28-215ENST00000559774 PCP4P48539 62 aa3.95□□□□□ -1.78
LRRC28-215ENST00000559774 SPRR2GQ9BYE4 73 aa3.95□□□□□ -1.78
LRRC28-215ENST00000559774 KRTAP4-11Q9BYQ6 195 aa3.95□□□□□ -1.78
LRRC28-215ENST00000559774 P0C880 135 aa3.91□□□□□ -1.78
LRRC28-215ENST00000559774 SEC61GP60059 68 aa3.91□□□□□ -1.78
LRRC28-215ENST00000559774 LCE5AQ5TCM9 118 aa3.91□□□□□ -1.78
LRRC28-215ENST00000559774 SERP1Q9Y6X1 66 aa3.9□□□□□ -1.79
LRRC28-215ENST00000559774 R4GN34 69 aa3.89□□□□□ -1.79
LRRC28-215ENST00000559774 KRTAP19-8Q3LI54 63 aa3.88□□□□□ -1.79
LRRC28-215ENST00000559774 M0QZ58 72 aa3.87□□□□□ -1.79
LRRC28-215ENST00000559774 Q5VV11 94 aa3.84□□□□□ -1.79
LRRC28-215ENST00000559774 CRCT1Q9UGL9 99 aa3.84□□□□□ -1.79
LRRC28-215ENST00000559774 USH2AO75445 5202 aa3.83□□□□□ -1.8
LRRC28-215ENST00000559774 A0A1B0GU69 56 aa3.83□□□□□ -1.8
LRRC28-215ENST00000559774 PRR15LQ9BU68 103 aa3.83□□□□□ -1.8
LRRC28-215ENST00000559774 LINC01558Q9Y6Z2 57 aa3.83□□□□□ -1.8
LRRC28-215ENST00000559774 FSIP2Q5CZC0 6907 aa3.83□□□□□ -1.8
LRRC28-215ENST00000559774 RPS28P62857 69 aaKnown RBP3.82□□□□□ -1.8
LRRC28-215ENST00000559774 MT1BP07438 61 aa3.8□□□□□ -1.8
LRRC28-215ENST00000559774 V9GYY9 64 aa3.8□□□□□ -1.8
LRRC28-215ENST00000559774 A0A1B0GU33 70 aa3.79□□□□□ -1.8
LRRC28-215ENST00000559774 KRTAP19-6Q3LI70 58 aa3.79□□□□□ -1.8
LRRC28-215ENST00000559774 A6NN06 94 aa3.78□□□□□ -1.8
LRRC28-215ENST00000559774 SMIM26A0A096LP01 95 aa3.76□□□□□ -1.81
LRRC28-215ENST00000559774 Q1T7F1 81 aa3.76□□□□□ -1.81
LRRC28-215ENST00000559774 PLAC4Q8WY50 150 aa3.76□□□□□ -1.81
LRRC28-215ENST00000559774 SSPOA2VEC9 5147 aa3.75□□□□□ -1.81
LRRC28-215ENST00000559774 KRTAP13-4Q3LI77 160 aa3.74□□□□□ -1.81
LRRC28-215ENST00000559774 LINC01554Q52M75 96 aa3.74□□□□□ -1.81
LRRC28-215ENST00000559774 UQCR11O14957 56 aa3.7□□□□□ -1.82
LRRC28-215ENST00000559774 KRTAP10-5P60370 271 aa3.69□□□□□ -1.82
LRRC28-215ENST00000559774 SPATA8Q6RVD6 105 aa3.69□□□□□ -1.82
LRRC28-215ENST00000559774 PRO2289Q9P1D8 64 aa3.69□□□□□ -1.82
LRRC28-215ENST00000559774 FCGBPQ9Y6R7 5405 aaPredicted RBP3.66□□□□□ -1.82
LRRC28-215ENST00000559774 A0A0D9SG42 100 aa3.64□□□□□ -1.83
LRRC28-215ENST00000559774 PSPHP1O15172 72 aa3.64□□□□□ -1.83
LRRC28-215ENST00000559774 MT1XP80297 61 aa3.63□□□□□ -1.83
LRRC28-215ENST00000559774 KRTAP12-1P59990 96 aa3.62□□□□□ -1.83
LRRC28-215ENST00000559774 MIR22HGQ0VDD5 57 aa3.61□□□□□ -1.83
LRRC28-215ENST00000559774 CAMK2N1Q7Z7J9 78 aa3.6□□□□□ -1.83
LRRC28-215ENST00000559774 A8MU10 97 aa3.59□□□□□ -1.83
LRRC28-215ENST00000559774 SPINT4Q6UDR6 99 aa3.59□□□□□ -1.83
LRRC28-215ENST00000559774 KRTAP12-2P59991 146 aa3.57□□□□□ -1.84
LRRC28-215ENST00000559774 A6NED7 52 aa3.56□□□□□ -1.84
LRRC28-215ENST00000559774 K7ERS5 55 aa3.54□□□□□ -1.84
LRRC28-215ENST00000559774 KRTAP5-3Q6L8H2 238 aa3.53□□□□□ -1.84
LRRC28-215ENST00000559774 MACF1Q9UPN3 7388 aaKnown RBP3.5□□□□□ -1.85
LRRC28-215ENST00000559774 CDC42SE1Q9NRR8 79 aa3.49□□□□□ -1.85
LRRC28-215ENST00000559774 KRTAP10-12P60413 245 aa3.48□□□□□ -1.85
LRRC28-215ENST00000559774 KRTAP10-7P60409 375 aaPredicted RBP3.45□□□□□ -1.86
LRRC28-215ENST00000559774 KRTAP6-3Q3LI67 103 aa3.44□□□□□ -1.86
LRRC28-215ENST00000559774 C10orf95Q9H7T3 257 aa3.42□□□□□ -1.86
LRRC28-215ENST00000559774 SYNE2Q8WXH0 6885 aaKnown RBP3.42□□□□□ -1.86
LRRC28-215ENST00000559774 TNP1P09430 55 aa3.41□□□□□ -1.86
LRRC28-215ENST00000559774 KRTAP5-9P26371 169 aa3.39□□□□□ -1.87
LRRC28-215ENST00000559774 KRTAP8-1Q8IUC2 63 aa3.38□□□□□ -1.87
LRRC28-215ENST00000559774 KRTAP25-1Q3LHN0 102 aa3.36□□□□□ -1.87
LRRC28-215ENST00000559774 KMT2DO14686 5537 aa3.33□□□□□ -1.88
LRRC28-215ENST00000559774 BRK1Q8WUW1 75 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms