RNA–Protein interactions for RNA: ENST00000559309.5

SNRPA1-207, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5

Gene SNRPA1, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-207ENST00000559309 H1FX-AS1Q4G0G2 97 aa7.27□□□□□ -1.25
SNRPA1-207ENST00000559309 KRTAP9-9Q9BYP9 154 aa7.26□□□□□ -1.25
SNRPA1-207ENST00000559309 KRTAP9-4Q9BYQ2 154 aa7.26□□□□□ -1.25
SNRPA1-207ENST00000559309 KRTAP4-8A0A0G2JLE6 195 aa7.21□□□□□ -1.26
SNRPA1-207ENST00000559309 COX7CP15954 63 aa7.2□□□□□ -1.26
SNRPA1-207ENST00000559309 KRTAP10-6P60371 365 aaPredicted RBP7.2□□□□□ -1.26
SNRPA1-207ENST00000559309 A8MUN3 132 aa7.16□□□□□ -1.26
SNRPA1-207ENST00000559309 C20orf197Q8N268 126 aa7.16□□□□□ -1.26
SNRPA1-207ENST00000559309 SNURFQ9Y675 71 aa7.15□□□□□ -1.26
SNRPA1-207ENST00000559309 M0R2T5 61 aa7.13□□□□□ -1.27
SNRPA1-207ENST00000559309 DMAC1Q96GE9 116 aa7.13□□□□□ -1.27
SNRPA1-207ENST00000559309 KRTAP9-8Q9BYQ0 159 aa7.13□□□□□ -1.27
SNRPA1-207ENST00000559309 ANAPC13Q9BS18 74 aa7.1□□□□□ -1.27
SNRPA1-207ENST00000559309 LCA10Q71F78 164 aa7.09□□□□□ -1.27
SNRPA1-207ENST00000559309 SPANXA2-OT1Q8N9U9 137 aa7.08□□□□□ -1.28
SNRPA1-207ENST00000559309 S4R3F8 94 aa7.08□□□□□ -1.28
SNRPA1-207ENST00000559309 KRTAP19-1Q8IUB9 90 aa7.06□□□□□ -1.28
SNRPA1-207ENST00000559309 CYSTM1Q9H1C7 97 aa7.06□□□□□ -1.28
SNRPA1-207ENST00000559309 H7BZZ5 65 aa7.03□□□□□ -1.28
SNRPA1-207ENST00000559309 MT2AP02795 61 aa7.03□□□□□ -1.28
SNRPA1-207ENST00000559309 NDUFC1O43677 76 aa7.01□□□□□ -1.29
SNRPA1-207ENST00000559309 CCDC179H3BU77 68 aa7□□□□□ -1.29
SNRPA1-207ENST00000559309 KRTAP4-7Q9BYR0 210 aa6.99□□□□□ -1.29
SNRPA1-207ENST00000559309 MT1FP04733 61 aa6.98□□□□□ -1.29
SNRPA1-207ENST00000559309 CSAG1Q6PB30 78 aa6.98□□□□□ -1.29
SNRPA1-207ENST00000559309 ACYP2P14621 99 aa6.96□□□□□ -1.3
SNRPA1-207ENST00000559309 SSPOA2VEC9 5147 aa6.91□□□□□ -1.3
SNRPA1-207ENST00000559309 KRTAP9-7A8MTY7 169 aa6.91□□□□□ -1.3
SNRPA1-207ENST00000559309 LCE1DQ5T752 114 aa6.91□□□□□ -1.3
SNRPA1-207ENST00000559309 USH2AO75445 5202 aa6.9□□□□□ -1.3
SNRPA1-207ENST00000559309 H0YAA0 97 aa6.9□□□□□ -1.3
SNRPA1-207ENST00000559309 KRTAP9-3Q9BYQ3 159 aa6.89□□□□□ -1.31
SNRPA1-207ENST00000559309 KRTAP10-10P60014 251 aa6.85□□□□□ -1.31
SNRPA1-207ENST00000559309 FCGBPQ9Y6R7 5405 aaPredicted RBP6.81□□□□□ -1.32
SNRPA1-207ENST00000559309 COA5Q86WW8 74 aa6.8□□□□□ -1.32
SNRPA1-207ENST00000559309 ATP5EP56381 51 aaPredicted RBP6.78□□□□□ -1.32
SNRPA1-207ENST00000559309 TMEM258P61165 79 aa6.76□□□□□ -1.33
SNRPA1-207ENST00000559309 SPTSSBQ8NFR3 76 aa6.75□□□□□ -1.33
SNRPA1-207ENST00000559309 KRTAP4-9Q9BYQ8 210 aa6.75□□□□□ -1.33
SNRPA1-207ENST00000559309 CHKB-CPT1BH3BT56 60 aa6.74□□□□□ -1.33
SNRPA1-207ENST00000559309 SPRR2GQ9BYE4 73 aa6.72□□□□□ -1.33
SNRPA1-207ENST00000559309 ADM2Q7Z4H4 148 aa6.71□□□□□ -1.34
SNRPA1-207ENST00000559309 CRIPTQ9P021 101 aa6.7□□□□□ -1.34
SNRPA1-207ENST00000559309 KRTAP4-2Q9BYR5 136 aa6.69□□□□□ -1.34
SNRPA1-207ENST00000559309 P0C880 135 aa6.67□□□□□ -1.34
SNRPA1-207ENST00000559309 PCP4P48539 62 aa6.67□□□□□ -1.34
SNRPA1-207ENST00000559309 KRTAP19-8Q3LI54 63 aa6.62□□□□□ -1.35
SNRPA1-207ENST00000559309 MT1BP07438 61 aa6.55□□□□□ -1.36
SNRPA1-207ENST00000559309 SERP1Q9Y6X1 66 aa6.54□□□□□ -1.36
SNRPA1-207ENST00000559309 MACF1Q9UPN3 7388 aaKnown RBP6.53□□□□□ -1.36
SNRPA1-207ENST00000559309 SYNE2Q8WXH0 6885 aaKnown RBP6.5□□□□□ -1.37
SNRPA1-207ENST00000559309 KRTAP19-6Q3LI70 58 aa6.49□□□□□ -1.37
SNRPA1-207ENST00000559309 R4GN34 69 aa6.49□□□□□ -1.37
SNRPA1-207ENST00000559309 M0QZ58 72 aa6.46□□□□□ -1.38
SNRPA1-207ENST00000559309 Q5VV11 94 aa6.45□□□□□ -1.38
SNRPA1-207ENST00000559309 KRTAP4-11Q9BYQ6 195 aa6.45□□□□□ -1.38
SNRPA1-207ENST00000559309 LINC01558Q9Y6Z2 57 aa6.45□□□□□ -1.38
SNRPA1-207ENST00000559309 KRTAP13-4Q3LI77 160 aa6.44□□□□□ -1.38
SNRPA1-207ENST00000559309 SEC61GP60059 68 aa6.42□□□□□ -1.38
SNRPA1-207ENST00000559309 RPS28P62857 69 aaKnown RBP6.4□□□□□ -1.38
SNRPA1-207ENST00000559309 A0A1B0GU69 56 aa6.39□□□□□ -1.39
SNRPA1-207ENST00000559309 KRTAP6-3Q3LI67 103 aa6.38□□□□□ -1.39
SNRPA1-207ENST00000559309 A0A1B0GU33 70 aa6.36□□□□□ -1.39
SNRPA1-207ENST00000559309 A6NN06 94 aa6.35□□□□□ -1.39
SNRPA1-207ENST00000559309 Q1T7F1 81 aa6.32□□□□□ -1.4
SNRPA1-207ENST00000559309 SMIM26A0A096LP01 95 aa6.3□□□□□ -1.4
SNRPA1-207ENST00000559309 LCE4AQ5TA78 99 aa6.3□□□□□ -1.4
SNRPA1-207ENST00000559309 PRR15LQ9BU68 103 aa6.3□□□□□ -1.4
SNRPA1-207ENST00000559309 KRTAP10-5P60370 271 aa6.29□□□□□ -1.4
SNRPA1-207ENST00000559309 LINC01554Q52M75 96 aa6.27□□□□□ -1.41
SNRPA1-207ENST00000559309 SPATA8Q6RVD6 105 aa6.27□□□□□ -1.41
SNRPA1-207ENST00000559309 V9GYY9 64 aa6.27□□□□□ -1.41
SNRPA1-207ENST00000559309 KRTAP5-3Q6L8H2 238 aa6.25□□□□□ -1.41
SNRPA1-207ENST00000559309 PLAC4Q8WY50 150 aa6.24□□□□□ -1.41
SNRPA1-207ENST00000559309 MT1XP80297 61 aa6.23□□□□□ -1.41
SNRPA1-207ENST00000559309 NEBP20929 6669 aa6.21□□□□□ -1.42
SNRPA1-207ENST00000559309 MUC12Q9UKN1 5478 aa6.19□□□□□ -1.42
SNRPA1-207ENST00000559309 KRTAP12-1P59990 96 aa6.16□□□□□ -1.42
SNRPA1-207ENST00000559309 UQCR11O14957 56 aa6.15□□□□□ -1.42
SNRPA1-207ENST00000559309 A0A0D9SG42 100 aa6.13□□□□□ -1.43
SNRPA1-207ENST00000559309 A8MU10 97 aa6.13□□□□□ -1.43
SNRPA1-207ENST00000559309 PSPHP1O15172 72 aa6.13□□□□□ -1.43
SNRPA1-207ENST00000559309 PRO2289Q9P1D8 64 aa6.11□□□□□ -1.43
SNRPA1-207ENST00000559309 KRTAP12-2P59991 146 aa6.1□□□□□ -1.43
SNRPA1-207ENST00000559309 LCE5AQ5TCM9 118 aa6.09□□□□□ -1.43
SNRPA1-207ENST00000559309 MIR22HGQ0VDD5 57 aa6.03□□□□□ -1.44
SNRPA1-207ENST00000559309 KRTAP20-1Q3LI63 56 aa6.03□□□□□ -1.44
SNRPA1-207ENST00000559309 MDN1Q9NU22 5596 aa6.01□□□□□ -1.45
SNRPA1-207ENST00000559309 SPINT4Q6UDR6 99 aa6.01□□□□□ -1.45
SNRPA1-207ENST00000559309 KMT2DO14686 5537 aa6□□□□□ -1.45
SNRPA1-207ENST00000559309 CAMK2N1Q7Z7J9 78 aa5.98□□□□□ -1.45
SNRPA1-207ENST00000559309 KRTAP5-9P26371 169 aa5.97□□□□□ -1.45
SNRPA1-207ENST00000559309 KRTAP10-12P60413 245 aa5.94□□□□□ -1.46
SNRPA1-207ENST00000559309 A6NED7 52 aa5.93□□□□□ -1.46
SNRPA1-207ENST00000559309 KRTAP10-7P60409 375 aaPredicted RBP5.92□□□□□ -1.46
SNRPA1-207ENST00000559309 KRTAP19-4Q3LI73 84 aa5.86□□□□□ -1.47
SNRPA1-207ENST00000559309 C10orf95Q9H7T3 257 aa5.86□□□□□ -1.47
SNRPA1-207ENST00000559309 CDC42SE1Q9NRR8 79 aa5.85□□□□□ -1.47
SNRPA1-207ENST00000559309 H3BS24 57 aa5.82□□□□□ -1.48
SNRPA1-207ENST00000559309 KRTAP2-3P0C7H8 128 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms