RNA–Protein interactions for RNA: ENST00000558890.5

LRRC28-211, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 978 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-211ENST00000558890 IGKV2-30P06310 120 aa4.27□□□□□ -1.73
LRRC28-211ENST00000558890 TPRXLQ17RH7 258 aa4.27□□□□□ -1.73
LRRC28-211ENST00000558890 RETNLBQ9BQ08 111 aa4.26□□□□□ -1.73
LRRC28-211ENST00000558890 A8MUN3 132 aa4.25□□□□□ -1.73
LRRC28-211ENST00000558890 HRES1P13985 223 aa4.25□□□□□ -1.73
LRRC28-211ENST00000558890 ACYP2P14621 99 aa4.25□□□□□ -1.73
LRRC28-211ENST00000558890 MUC2Q02817 5179 aa4.25□□□□□ -1.73
LRRC28-211ENST00000558890 PRR15LQ9BU68 103 aa4.25□□□□□ -1.73
LRRC28-211ENST00000558890 CHKB-CPT1BH3BT56 60 aa4.24□□□□□ -1.73
LRRC28-211ENST00000558890 DMAC1Q96GE9 116 aa4.23□□□□□ -1.73
LRRC28-211ENST00000558890 IGKV2D-30A0A075B6S6 120 aa4.22□□□□□ -1.73
LRRC28-211ENST00000558890 Q5VV11 94 aa4.22□□□□□ -1.73
LRRC28-211ENST00000558890 LINC01558Q9Y6Z2 57 aa4.21□□□□□ -1.74
LRRC28-211ENST00000558890 C7orf65Q6ZTY9 151 aa4.2□□□□□ -1.74
LRRC28-211ENST00000558890 Q75L30 129 aa4.2□□□□□ -1.74
LRRC28-211ENST00000558890 A6NED7 52 aa4.17□□□□□ -1.74
LRRC28-211ENST00000558890 KRTAP9-9Q9BYP9 154 aa4.16□□□□□ -1.74
LRRC28-211ENST00000558890 KRTAP9-4Q9BYQ2 154 aa4.16□□□□□ -1.74
LRRC28-211ENST00000558890 C20orf166-AS1Q96NR2 134 aa4.15□□□□□ -1.75
LRRC28-211ENST00000558890 C9orf92A6NGG3 77 aa4.14□□□□□ -1.75
LRRC28-211ENST00000558890 A8MUU9 505 aa4.14□□□□□ -1.75
LRRC28-211ENST00000558890 FAT4Q6V0I7 4981 aa4.13□□□□□ -1.75
LRRC28-211ENST00000558890 A0A1B0GU69 56 aa4.11□□□□□ -1.75
LRRC28-211ENST00000558890 RPL37P61927 97 aaKnown RBP4.11□□□□□ -1.75
LRRC28-211ENST00000558890 LCE4AQ5TA78 99 aa4.11□□□□□ -1.75
LRRC28-211ENST00000558890 SPTSSBQ8NFR3 76 aa4.11□□□□□ -1.75
LRRC28-211ENST00000558890 CDC42SE1Q9NRR8 79 aa4.11□□□□□ -1.75
LRRC28-211ENST00000558890 KRTAP9-7A8MTY7 169 aa4.1□□□□□ -1.75
LRRC28-211ENST00000558890 SEC61BP60468 96 aaKnown RBP4.1□□□□□ -1.75
LRRC28-211ENST00000558890 KRTAP3-1Q9BYR8 98 aa4.09□□□□□ -1.75
LRRC28-211ENST00000558890 KRTAP23-1A1A580 65 aa4.08□□□□□ -1.76
LRRC28-211ENST00000558890 ATP11AUNQ6ZP68 121 aa4.08□□□□□ -1.76
LRRC28-211ENST00000558890 LCA10Q71F78 164 aa4.07□□□□□ -1.76
LRRC28-211ENST00000558890 KRTAP4-1Q9BYQ7 146 aa4.07□□□□□ -1.76
LRRC28-211ENST00000558890 SPINK7P58062 85 aa4.06□□□□□ -1.76
LRRC28-211ENST00000558890 KRTAP4-8A0A0G2JLE6 195 aa4.05□□□□□ -1.76
LRRC28-211ENST00000558890 SEC61GP60059 68 aa4.05□□□□□ -1.76
LRRC28-211ENST00000558890 PMAIP1Q13794 54 aa4.05□□□□□ -1.76
LRRC28-211ENST00000558890 FLGP20930 4061 aaPredicted RBP4.03□□□□□ -1.76
LRRC28-211ENST00000558890 A8MU10 97 aa4.03□□□□□ -1.76
LRRC28-211ENST00000558890 UQCR11O14957 56 aa4.02□□□□□ -1.77
LRRC28-211ENST00000558890 LCE1DQ5T752 114 aa4.02□□□□□ -1.77
LRRC28-211ENST00000558890 MIR22HGQ0VDD5 57 aa4□□□□□ -1.77
LRRC28-211ENST00000558890 COX6B2Q6YFQ2 88 aa4□□□□□ -1.77
LRRC28-211ENST00000558890 KRTAP19-2Q3LHN2 52 aa3.98□□□□□ -1.77
LRRC28-211ENST00000558890 SPATA8Q6RVD6 105 aa3.98□□□□□ -1.77
LRRC28-211ENST00000558890 A6NN06 94 aa3.97□□□□□ -1.77
LRRC28-211ENST00000558890 KTN1-AS1Q86SY8 53 aa3.97□□□□□ -1.77
LRRC28-211ENST00000558890 KRTAP9-3Q9BYQ3 159 aa3.94□□□□□ -1.78
LRRC28-211ENST00000558890 KRTAP4-7Q9BYR0 210 aa3.9□□□□□ -1.79
LRRC28-211ENST00000558890 A0A1B0GU33 70 aa3.89□□□□□ -1.79
LRRC28-211ENST00000558890 H1FX-AS1Q4G0G2 97 aa3.89□□□□□ -1.79
LRRC28-211ENST00000558890 LCE5AQ5TCM9 118 aa3.88□□□□□ -1.79
LRRC28-211ENST00000558890 RBM12B-AS1Q9P1G2 102 aa3.88□□□□□ -1.79
LRRC28-211ENST00000558890 S4R3F8 94 aa3.88□□□□□ -1.79
LRRC28-211ENST00000558890 KRTAP4-9Q9BYQ8 210 aa3.86□□□□□ -1.79
LRRC28-211ENST00000558890 H0YAA0 97 aa3.84□□□□□ -1.79
LRRC28-211ENST00000558890 K7ERS5 55 aa3.83□□□□□ -1.8
LRRC28-211ENST00000558890 MT1HP80294 61 aa3.83□□□□□ -1.8
LRRC28-211ENST00000558890 CSAG1Q6PB30 78 aa3.76□□□□□ -1.81
LRRC28-211ENST00000558890 PRAC1Q96KF2 57 aa3.76□□□□□ -1.81
LRRC28-211ENST00000558890 KRTAP4-11Q9BYQ6 195 aa3.76□□□□□ -1.81
LRRC28-211ENST00000558890 KRTAP10-6P60371 365 aaPredicted RBP3.75□□□□□ -1.81
LRRC28-211ENST00000558890 ADM2Q7Z4H4 148 aa3.73□□□□□ -1.81
LRRC28-211ENST00000558890 KRTAP15-1Q3LI76 137 aa3.72□□□□□ -1.81
LRRC28-211ENST00000558890 KRTAP4-2Q9BYR5 136 aa3.71□□□□□ -1.82
LRRC28-211ENST00000558890 A0A0D9SG42 100 aa3.7□□□□□ -1.82
LRRC28-211ENST00000558890 P0C880 135 aa3.69□□□□□ -1.82
LRRC28-211ENST00000558890 KRTAP9-8Q9BYQ0 159 aa3.69□□□□□ -1.82
LRRC28-211ENST00000558890 M0QZ58 72 aa3.67□□□□□ -1.82
LRRC28-211ENST00000558890 KRTAP13-4Q3LI77 160 aa3.67□□□□□ -1.82
LRRC28-211ENST00000558890 M0R2T5 61 aa3.66□□□□□ -1.82
LRRC28-211ENST00000558890 ROMO1P60602 79 aa3.66□□□□□ -1.82
LRRC28-211ENST00000558890 LINC01554Q52M75 96 aa3.64□□□□□ -1.83
LRRC28-211ENST00000558890 USH2AO75445 5202 aa3.64□□□□□ -1.83
LRRC28-211ENST00000558890 FSIP2Q5CZC0 6907 aa3.63□□□□□ -1.83
LRRC28-211ENST00000558890 KRTAP25-1Q3LHN0 102 aa3.62□□□□□ -1.83
LRRC28-211ENST00000558890 MT2AP02795 61 aa3.61□□□□□ -1.83
LRRC28-211ENST00000558890 SPINT4Q6UDR6 99 aa3.61□□□□□ -1.83
LRRC28-211ENST00000558890 MT1FP04733 61 aa3.59□□□□□ -1.83
LRRC28-211ENST00000558890 SSPOA2VEC9 5147 aa3.59□□□□□ -1.83
LRRC28-211ENST00000558890 KRTAP12-1P59990 96 aa3.58□□□□□ -1.84
LRRC28-211ENST00000558890 R4GN34 69 aa3.58□□□□□ -1.84
LRRC28-211ENST00000558890 KRTAP12-2P59991 146 aa3.57□□□□□ -1.84
LRRC28-211ENST00000558890 CRIPTQ9P021 101 aa3.55□□□□□ -1.84
LRRC28-211ENST00000558890 CRCT1Q9UGL9 99 aa3.53□□□□□ -1.84
LRRC28-211ENST00000558890 KRTAP10-10P60014 251 aa3.5□□□□□ -1.85
LRRC28-211ENST00000558890 FCGBPQ9Y6R7 5405 aaPredicted RBP3.47□□□□□ -1.85
LRRC28-211ENST00000558890 SPRR2GQ9BYE4 73 aa3.46□□□□□ -1.86
LRRC28-211ENST00000558890 C10orf95Q9H7T3 257 aa3.44□□□□□ -1.86
LRRC28-211ENST00000558890 CAMK2N1Q7Z7J9 78 aa3.42□□□□□ -1.86
LRRC28-211ENST00000558890 KRTAP19-8Q3LI54 63 aa3.39□□□□□ -1.87
LRRC28-211ENST00000558890 KRTAP19-6Q3LI70 58 aa3.37□□□□□ -1.87
LRRC28-211ENST00000558890 MT1BP07438 61 aa3.34□□□□□ -1.87
LRRC28-211ENST00000558890 A0A0A0MQY5 61 aa3.33□□□□□ -1.88
LRRC28-211ENST00000558890 PP632Q6XCG6 107 aa3.32□□□□□ -1.88
LRRC28-211ENST00000558890 PLAC4Q8WY50 150 aa3.29□□□□□ -1.88
LRRC28-211ENST00000558890 TNP1P09430 55 aa3.28□□□□□ -1.88
LRRC28-211ENST00000558890 MACF1Q9UPN3 7388 aaKnown RBP3.28□□□□□ -1.88
LRRC28-211ENST00000558890 SYNE2Q8WXH0 6885 aaKnown RBP3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms