RNA–Protein interactions for RNA: ENST00000554808.1

LINC01397-201, Transcript of long intergenic non-protein coding RNA 1397, humanhuman

TSL 4 BASIC

Gene LINC01397, Length 579 nt, Biotype antisense RNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01397-201ENST00000554808 SPANXA2-OT1Q8N9U9 137 aa3.92□□□□□ -1.78
LINC01397-201ENST00000554808 SVIPQ8NHG7 77 aa3.92□□□□□ -1.78
LINC01397-201ENST00000554808 DMAC1Q96GE9 116 aa3.91□□□□□ -1.78
LINC01397-201ENST00000554808 SNURFQ9Y675 71 aa3.91□□□□□ -1.78
LINC01397-201ENST00000554808 ACYP2P14621 99 aa3.89□□□□□ -1.79
LINC01397-201ENST00000554808 CSAG1Q6PB30 78 aa3.89□□□□□ -1.79
LINC01397-201ENST00000554808 LCA10Q71F78 164 aa3.89□□□□□ -1.79
LINC01397-201ENST00000554808 KRTAP9-7A8MTY7 169 aa3.86□□□□□ -1.79
LINC01397-201ENST00000554808 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.86□□□□□ -1.79
LINC01397-201ENST00000554808 SPTSSBQ8NFR3 76 aa3.84□□□□□ -1.79
LINC01397-201ENST00000554808 H7BZZ5 65 aa3.83□□□□□ -1.8
LINC01397-201ENST00000554808 KRTAP9-8Q9BYQ0 159 aa3.83□□□□□ -1.8
LINC01397-201ENST00000554808 SSPOA2VEC9 5147 aa3.83□□□□□ -1.8
LINC01397-201ENST00000554808 KRTAP3-3Q9BYR6 98 aa3.82□□□□□ -1.8
LINC01397-201ENST00000554808 H0YAA0 97 aa3.81□□□□□ -1.8
LINC01397-201ENST00000554808 CHKB-CPT1BH3BT56 60 aa3.81□□□□□ -1.8
LINC01397-201ENST00000554808 CCDC179H3BU77 68 aa3.81□□□□□ -1.8
LINC01397-201ENST00000554808 MT2AP02795 61 aa3.8□□□□□ -1.8
LINC01397-201ENST00000554808 ATP5EP56381 51 aaPredicted RBP3.8□□□□□ -1.8
LINC01397-201ENST00000554808 KRTAP10-10P60014 251 aa3.79□□□□□ -1.8
LINC01397-201ENST00000554808 USH2AO75445 5202 aa3.79□□□□□ -1.8
LINC01397-201ENST00000554808 MT1FP04733 61 aa3.76□□□□□ -1.81
LINC01397-201ENST00000554808 CYSTM1Q9H1C7 97 aa3.76□□□□□ -1.81
LINC01397-201ENST00000554808 TMEM258P61165 79 aa3.75□□□□□ -1.81
LINC01397-201ENST00000554808 COA5Q86WW8 74 aa3.74□□□□□ -1.81
LINC01397-201ENST00000554808 CRIPTQ9P021 101 aa3.74□□□□□ -1.81
LINC01397-201ENST00000554808 FCGBPQ9Y6R7 5405 aaPredicted RBP3.73□□□□□ -1.81
LINC01397-201ENST00000554808 RPS28P62857 69 aaKnown RBP3.71□□□□□ -1.82
LINC01397-201ENST00000554808 KRTAP9-3Q9BYQ3 159 aa3.71□□□□□ -1.82
LINC01397-201ENST00000554808 ADM2Q7Z4H4 148 aa3.7□□□□□ -1.82
LINC01397-201ENST00000554808 SEC61GP60059 68 aa3.66□□□□□ -1.82
LINC01397-201ENST00000554808 KRTAP19-1Q8IUB9 90 aa3.66□□□□□ -1.82
LINC01397-201ENST00000554808 SPRR2GQ9BYE4 73 aa3.66□□□□□ -1.82
LINC01397-201ENST00000554808 R4GN34 69 aa3.64□□□□□ -1.83
LINC01397-201ENST00000554808 LCE2BO14633 110 aa3.63□□□□□ -1.83
LINC01397-201ENST00000554808 SERP1Q9Y6X1 66 aa3.63□□□□□ -1.83
LINC01397-201ENST00000554808 P0C880 135 aa3.62□□□□□ -1.83
LINC01397-201ENST00000554808 MACF1Q9UPN3 7388 aaKnown RBP3.62□□□□□ -1.83
LINC01397-201ENST00000554808 KRTAP3-2Q9BYR7 98 aa3.61□□□□□ -1.83
LINC01397-201ENST00000554808 M0QZ58 72 aa3.6□□□□□ -1.83
LINC01397-201ENST00000554808 Q5VV11 94 aa3.6□□□□□ -1.83
LINC01397-201ENST00000554808 SYNE2Q8WXH0 6885 aaKnown RBP3.59□□□□□ -1.83
LINC01397-201ENST00000554808 KRTAP19-8Q3LI54 63 aa3.59□□□□□ -1.83
LINC01397-201ENST00000554808 A0A1B0GU69 56 aa3.58□□□□□ -1.84
LINC01397-201ENST00000554808 PRR15LQ9BU68 103 aa3.58□□□□□ -1.84
LINC01397-201ENST00000554808 V9GYY9 64 aa3.55□□□□□ -1.84
LINC01397-201ENST00000554808 SMIM26A0A096LP01 95 aa3.54□□□□□ -1.84
LINC01397-201ENST00000554808 LINC01558Q9Y6Z2 57 aa3.54□□□□□ -1.84
LINC01397-201ENST00000554808 KRTAP19-6Q3LI70 58 aa3.53□□□□□ -1.84
LINC01397-201ENST00000554808 A0A1B0GU33 70 aa3.52□□□□□ -1.85
LINC01397-201ENST00000554808 MT1BP07438 61 aa3.52□□□□□ -1.85
LINC01397-201ENST00000554808 A6NN06 94 aa3.51□□□□□ -1.85
LINC01397-201ENST00000554808 PLAC4Q8WY50 150 aa3.51□□□□□ -1.85
LINC01397-201ENST00000554808 KRTAP6-3Q3LI67 103 aa3.49□□□□□ -1.85
LINC01397-201ENST00000554808 LINC01554Q52M75 96 aa3.49□□□□□ -1.85
LINC01397-201ENST00000554808 Q1T7F1 81 aa3.48□□□□□ -1.85
LINC01397-201ENST00000554808 PRO2289Q9P1D8 64 aa3.46□□□□□ -1.86
LINC01397-201ENST00000554808 UQCR11O14957 56 aa3.45□□□□□ -1.86
LINC01397-201ENST00000554808 KRTAP13-4Q3LI77 160 aa3.45□□□□□ -1.86
LINC01397-201ENST00000554808 MUC12Q9UKN1 5478 aa3.45□□□□□ -1.86
LINC01397-201ENST00000554808 KRTAP10-5P60370 271 aa3.43□□□□□ -1.86
LINC01397-201ENST00000554808 SPATA8Q6RVD6 105 aa3.43□□□□□ -1.86
LINC01397-201ENST00000554808 NEBP20929 6669 aa3.42□□□□□ -1.86
LINC01397-201ENST00000554808 A0A0D9SG42 100 aa3.39□□□□□ -1.87
LINC01397-201ENST00000554808 PSPHP1O15172 72 aa3.37□□□□□ -1.87
LINC01397-201ENST00000554808 CAMK2N1Q7Z7J9 78 aa3.37□□□□□ -1.87
LINC01397-201ENST00000554808 MT1XP80297 61 aa3.36□□□□□ -1.87
LINC01397-201ENST00000554808 SPINT4Q6UDR6 99 aa3.36□□□□□ -1.87
LINC01397-201ENST00000554808 KRTAP12-1P59990 96 aa3.35□□□□□ -1.87
LINC01397-201ENST00000554808 MIR22HGQ0VDD5 57 aa3.35□□□□□ -1.87
LINC01397-201ENST00000554808 KRTAP20-1Q3LI63 56 aa3.35□□□□□ -1.87
LINC01397-201ENST00000554808 A8MU10 97 aa3.33□□□□□ -1.88
LINC01397-201ENST00000554808 A6NED7 52 aa3.32□□□□□ -1.88
LINC01397-201ENST00000554808 K7ERS5 55 aa3.32□□□□□ -1.88
LINC01397-201ENST00000554808 KRTAP12-2P59991 146 aa3.3□□□□□ -1.88
LINC01397-201ENST00000554808 MDN1Q9NU22 5596 aa3.27□□□□□ -1.89
LINC01397-201ENST00000554808 KMT2DO14686 5537 aa3.26□□□□□ -1.89
LINC01397-201ENST00000554808 KRTAP5-9P26371 169 aa3.26□□□□□ -1.89
LINC01397-201ENST00000554808 CDC42SE1Q9NRR8 79 aa3.24□□□□□ -1.89
LINC01397-201ENST00000554808 KRTAP10-12P60413 245 aa3.22□□□□□ -1.89
LINC01397-201ENST00000554808 PRO0628Q9UI54 55 aa3.22□□□□□ -1.89
LINC01397-201ENST00000554808 TNP1P09430 55 aa3.19□□□□□ -1.9
LINC01397-201ENST00000554808 KRTAP10-7P60409 375 aaPredicted RBP3.19□□□□□ -1.9
LINC01397-201ENST00000554808 BRK1Q8WUW1 75 aa3.19□□□□□ -1.9
LINC01397-201ENST00000554808 KRTAP2-3P0C7H8 128 aa3.17□□□□□ -1.9
LINC01397-201ENST00000554808 KRTAP2-4Q9BYR9 128 aa3.17□□□□□ -1.9
LINC01397-201ENST00000554808 KRTAP8-1Q8IUC2 63 aa3.16□□□□□ -1.9
LINC01397-201ENST00000554808 C10orf95Q9H7T3 257 aa3.16□□□□□ -1.9
LINC01397-201ENST00000554808 KRTAP25-1Q3LHN0 102 aa3.13□□□□□ -1.91
LINC01397-201ENST00000554808 KRTAP4-8A0A0G2JLE6 195 aa3.1□□□□□ -1.91
LINC01397-201ENST00000554808 SPRR2EP22531 72 aa3.1□□□□□ -1.91
LINC01397-201ENST00000554808 SPRR2BP35325 72 aa3.1□□□□□ -1.91
LINC01397-201ENST00000554808 SPRR2AP35326 72 aa3.1□□□□□ -1.91
LINC01397-201ENST00000554808 SPRR2FQ96RM1 72 aa3.1□□□□□ -1.91
LINC01397-201ENST00000554808 KRTAP4-8Q9BYQ9 185 aa3.1□□□□□ -1.91
LINC01397-201ENST00000554808 ROMO1P60602 79 aa3.07□□□□□ -1.92
LINC01397-201ENST00000554808 PMAIP1Q13794 54 aa3.07□□□□□ -1.92
LINC01397-201ENST00000554808 KRTAP23-1A1A580 65 aa3.06□□□□□ -1.92
LINC01397-201ENST00000554808 KRTAP2-2Q9BYT5 123 aa3.06□□□□□ -1.92
LINC01397-201ENST00000554808 KRTAP2-1Q9BYU5 128 aa3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms