RNA–Protein interactions for RNA: ENST00000554685.2

SHOX2-206, Transcript of short stature homeobox 2, humanhuman

TSL 5

Gene SHOX2, Length 439 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-206ENST00000554685 RNF213Q63HN8 5207 aa7.3□□□□□ -1.24
SHOX2-206ENST00000554685 FAM236DA0A1B0GTK5 79 aa7.3□□□□□ -1.24
SHOX2-206ENST00000554685 H7BZZ5 65 aa7.3□□□□□ -1.24
SHOX2-206ENST00000554685 FAM236CP0DP71 79 aa7.3□□□□□ -1.24
SHOX2-206ENST00000554685 A8MUN3 132 aa7.28□□□□□ -1.24
SHOX2-206ENST00000554685 CYSTM1Q9H1C7 97 aa7.28□□□□□ -1.24
SHOX2-206ENST00000554685 KRTAP9-9Q9BYP9 154 aa7.27□□□□□ -1.25
SHOX2-206ENST00000554685 KRTAP9-4Q9BYQ2 154 aa7.27□□□□□ -1.25
SHOX2-206ENST00000554685 DMAC1Q96GE9 116 aa7.23□□□□□ -1.25
SHOX2-206ENST00000554685 ATP5EP56381 51 aaPredicted RBP7.22□□□□□ -1.25
SHOX2-206ENST00000554685 TMEM258P61165 79 aa7.22□□□□□ -1.25
SHOX2-206ENST00000554685 H1FX-AS1Q4G0G2 97 aa7.21□□□□□ -1.26
SHOX2-206ENST00000554685 ACYP2P14621 99 aa7.19□□□□□ -1.26
SHOX2-206ENST00000554685 KRTAP3-1Q9BYR8 98 aa7.18□□□□□ -1.26
SHOX2-206ENST00000554685 MUC2Q02817 5179 aa7.17□□□□□ -1.26
SHOX2-206ENST00000554685 KRTAP19-2Q3LHN2 52 aa7.17□□□□□ -1.26
SHOX2-206ENST00000554685 LCE4AQ5TA78 99 aa7.16□□□□□ -1.26
SHOX2-206ENST00000554685 S4R3F8 94 aa7.12□□□□□ -1.27
SHOX2-206ENST00000554685 KRTAP4-8A0A0G2JLE6 195 aa7.08□□□□□ -1.28
SHOX2-206ENST00000554685 CHKB-CPT1BH3BT56 60 aa7.08□□□□□ -1.28
SHOX2-206ENST00000554685 KRTAP9-7A8MTY7 169 aa7.07□□□□□ -1.28
SHOX2-206ENST00000554685 COA5Q86WW8 74 aa7.05□□□□□ -1.28
SHOX2-206ENST00000554685 SPTSSBQ8NFR3 76 aa7.04□□□□□ -1.28
SHOX2-206ENST00000554685 LCA10Q71F78 164 aa7.03□□□□□ -1.28
SHOX2-206ENST00000554685 FAT4Q6V0I7 4981 aa7.01□□□□□ -1.29
SHOX2-206ENST00000554685 MT1HP80294 61 aa7□□□□□ -1.29
SHOX2-206ENST00000554685 LCE1DQ5T752 114 aa6.99□□□□□ -1.29
SHOX2-206ENST00000554685 CSAG1Q6PB30 78 aa6.99□□□□□ -1.29
SHOX2-206ENST00000554685 SERP1Q9Y6X1 66 aa6.99□□□□□ -1.29
SHOX2-206ENST00000554685 FLGP20930 4061 aaPredicted RBP6.99□□□□□ -1.29
SHOX2-206ENST00000554685 M0R2T5 61 aa6.98□□□□□ -1.29
SHOX2-206ENST00000554685 RPS28P62857 69 aaKnown RBP6.87□□□□□ -1.31
SHOX2-206ENST00000554685 H0YAA0 97 aa6.82□□□□□ -1.32
SHOX2-206ENST00000554685 KRTAP4-7Q9BYR0 210 aa6.81□□□□□ -1.32
SHOX2-206ENST00000554685 KRTAP10-6P60371 365 aaPredicted RBP6.79□□□□□ -1.32
SHOX2-206ENST00000554685 KRTAP9-3Q9BYQ3 159 aa6.79□□□□□ -1.32
SHOX2-206ENST00000554685 SMIM26A0A096LP01 95 aa6.78□□□□□ -1.32
SHOX2-206ENST00000554685 SEC61GP60059 68 aa6.78□□□□□ -1.32
SHOX2-206ENST00000554685 KRTAP23-1A1A580 65 aa6.75□□□□□ -1.33
SHOX2-206ENST00000554685 V9GYY9 64 aa6.75□□□□□ -1.33
SHOX2-206ENST00000554685 KRTAP4-9Q9BYQ8 210 aa6.74□□□□□ -1.33
SHOX2-206ENST00000554685 ADM2Q7Z4H4 148 aa6.73□□□□□ -1.33
SHOX2-206ENST00000554685 LINC01558Q9Y6Z2 57 aa6.73□□□□□ -1.33
SHOX2-206ENST00000554685 A0A1B0GU69 56 aa6.71□□□□□ -1.34
SHOX2-206ENST00000554685 PRR15LQ9BU68 103 aa6.71□□□□□ -1.34
SHOX2-206ENST00000554685 LCE5AQ5TCM9 118 aa6.7□□□□□ -1.34
SHOX2-206ENST00000554685 KRTAP9-8Q9BYQ0 159 aa6.7□□□□□ -1.34
SHOX2-206ENST00000554685 Q1T7F1 81 aa6.68□□□□□ -1.34
SHOX2-206ENST00000554685 MT2AP02795 61 aa6.67□□□□□ -1.34
SHOX2-206ENST00000554685 KRTAP10-10P60014 251 aa6.65□□□□□ -1.34
SHOX2-206ENST00000554685 P0C880 135 aa6.63□□□□□ -1.35
SHOX2-206ENST00000554685 CRIPTQ9P021 101 aa6.63□□□□□ -1.35
SHOX2-206ENST00000554685 MT1FP04733 61 aa6.62□□□□□ -1.35
SHOX2-206ENST00000554685 A0A1B0GU33 70 aa6.56□□□□□ -1.36
SHOX2-206ENST00000554685 KRTAP4-11Q9BYQ6 195 aa6.55□□□□□ -1.36
SHOX2-206ENST00000554685 R4GN34 69 aa6.55□□□□□ -1.36
SHOX2-206ENST00000554685 M0QZ58 72 aa6.54□□□□□ -1.36
SHOX2-206ENST00000554685 PSPHP1O15172 72 aa6.54□□□□□ -1.36
SHOX2-206ENST00000554685 KRTAP4-2Q9BYR5 136 aa6.5□□□□□ -1.37
SHOX2-206ENST00000554685 UQCR11O14957 56 aa6.48□□□□□ -1.37
SHOX2-206ENST00000554685 Q5VV11 94 aa6.48□□□□□ -1.37
SHOX2-206ENST00000554685 SPRR2GQ9BYE4 73 aa6.47□□□□□ -1.37
SHOX2-206ENST00000554685 KRTAP13-4Q3LI77 160 aa6.4□□□□□ -1.38
SHOX2-206ENST00000554685 SPATA8Q6RVD6 105 aa6.39□□□□□ -1.39
SHOX2-206ENST00000554685 A6NED7 52 aa6.38□□□□□ -1.39
SHOX2-206ENST00000554685 MIR22HGQ0VDD5 57 aa6.37□□□□□ -1.39
SHOX2-206ENST00000554685 LINC01554Q52M75 96 aa6.37□□□□□ -1.39
SHOX2-206ENST00000554685 KRTAP19-8Q3LI54 63 aa6.34□□□□□ -1.39
SHOX2-206ENST00000554685 A6NN06 94 aa6.33□□□□□ -1.4
SHOX2-206ENST00000554685 A0A0D9SG42 100 aa6.31□□□□□ -1.4
SHOX2-206ENST00000554685 KRTAP15-1Q3LI76 137 aa6.29□□□□□ -1.4
SHOX2-206ENST00000554685 A8MU10 97 aa6.27□□□□□ -1.41
SHOX2-206ENST00000554685 PLAC4Q8WY50 150 aa6.26□□□□□ -1.41
SHOX2-206ENST00000554685 CDC42SE1Q9NRR8 79 aa6.25□□□□□ -1.41
SHOX2-206ENST00000554685 MT1BP07438 61 aa6.22□□□□□ -1.41
SHOX2-206ENST00000554685 SPINT4Q6UDR6 99 aa6.21□□□□□ -1.42
SHOX2-206ENST00000554685 K7ERS5 55 aa6.2□□□□□ -1.42
SHOX2-206ENST00000554685 KRTAP12-1P59990 96 aa6.19□□□□□ -1.42
SHOX2-206ENST00000554685 CRCT1Q9UGL9 99 aa6.18□□□□□ -1.42
SHOX2-206ENST00000554685 USH2AO75445 5202 aa6.15□□□□□ -1.43
SHOX2-206ENST00000554685 FSIP2Q5CZC0 6907 aa6.14□□□□□ -1.43
SHOX2-206ENST00000554685 KRTAP12-2P59991 146 aa6.14□□□□□ -1.43
SHOX2-206ENST00000554685 BRK1Q8WUW1 75 aa6.14□□□□□ -1.43
SHOX2-206ENST00000554685 CAMK2N1Q7Z7J9 78 aa6.12□□□□□ -1.43
SHOX2-206ENST00000554685 PRO2289Q9P1D8 64 aa6.06□□□□□ -1.44
SHOX2-206ENST00000554685 KRTAP19-6Q3LI70 58 aa6.03□□□□□ -1.44
SHOX2-206ENST00000554685 KRTAP10-5P60370 271 aa5.99□□□□□ -1.45
SHOX2-206ENST00000554685 MT1XP80297 61 aa5.98□□□□□ -1.45
SHOX2-206ENST00000554685 SSPOA2VEC9 5147 aa5.98□□□□□ -1.45
SHOX2-206ENST00000554685 PRO0628Q9UI54 55 aa5.91□□□□□ -1.46
SHOX2-206ENST00000554685 C10orf95Q9H7T3 257 aa5.85□□□□□ -1.47
SHOX2-206ENST00000554685 ROMO1P60602 79 aa5.83□□□□□ -1.48
SHOX2-206ENST00000554685 SVIPQ8NHG7 77 aa5.83□□□□□ -1.48
SHOX2-206ENST00000554685 PMAIP1Q13794 54 aa5.81□□□□□ -1.48
SHOX2-206ENST00000554685 TNP1P09430 55 aa5.8□□□□□ -1.48
SHOX2-206ENST00000554685 FCGBPQ9Y6R7 5405 aaPredicted RBP5.79□□□□□ -1.48
SHOX2-206ENST00000554685 KRTAP25-1Q3LHN0 102 aa5.76□□□□□ -1.49
SHOX2-206ENST00000554685 KRTAP10-7P60409 375 aaPredicted RBP5.7□□□□□ -1.5
SHOX2-206ENST00000554685 KRTAP10-12P60413 245 aa5.69□□□□□ -1.5
SHOX2-206ENST00000554685 PP632Q6XCG6 107 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 503.3 ms