RNA–Protein interactions for RNA: ENST00000551355.5

NEK3-203, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 727 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-203ENST00000551355 MPLKIPQ8TAP9 179 aa5.32□□□□□ -1.56
NEK3-203ENST00000551355 A8MUN3 132 aa5.31□□□□□ -1.56
NEK3-203ENST00000551355 C4orf26Q17RF5 130 aa5.31□□□□□ -1.56
NEK3-203ENST00000551355 COX6B2Q6YFQ2 88 aa5.31□□□□□ -1.56
NEK3-203ENST00000551355 KRTAP4-7Q9BYR0 210 aa5.28□□□□□ -1.56
NEK3-203ENST00000551355 CYSTM1Q9H1C7 97 aa5.28□□□□□ -1.56
NEK3-203ENST00000551355 FAM236DA0A1B0GTK5 79 aa5.27□□□□□ -1.57
NEK3-203ENST00000551355 FAM236CP0DP71 79 aa5.27□□□□□ -1.57
NEK3-203ENST00000551355 ATP5EP56381 51 aaPredicted RBP5.27□□□□□ -1.57
NEK3-203ENST00000551355 TMEM258P61165 79 aa5.26□□□□□ -1.57
NEK3-203ENST00000551355 LCE1DQ5T752 114 aa5.26□□□□□ -1.57
NEK3-203ENST00000551355 DMAC1Q96GE9 116 aa5.26□□□□□ -1.57
NEK3-203ENST00000551355 ACYP2P14621 99 aa5.24□□□□□ -1.57
NEK3-203ENST00000551355 H1FX-AS1Q4G0G2 97 aa5.24□□□□□ -1.57
NEK3-203ENST00000551355 KRTAP23-1A1A580 65 aa5.21□□□□□ -1.58
NEK3-203ENST00000551355 KRTAP3-1Q9BYR8 98 aa5.21□□□□□ -1.58
NEK3-203ENST00000551355 UBR4Q5T4S7 5183 aa5.2□□□□□ -1.58
NEK3-203ENST00000551355 KRTAP19-2Q3LHN2 52 aa5.18□□□□□ -1.58
NEK3-203ENST00000551355 MUC2Q02817 5179 aa5.15□□□□□ -1.58
NEK3-203ENST00000551355 KRTAP4-9Q9BYQ8 210 aa5.15□□□□□ -1.59
NEK3-203ENST00000551355 S4R3F8 94 aa5.15□□□□□ -1.59
NEK3-203ENST00000551355 CHKB-CPT1BH3BT56 60 aa5.14□□□□□ -1.59
NEK3-203ENST00000551355 SPTSSBQ8NFR3 76 aa5.13□□□□□ -1.59
NEK3-203ENST00000551355 COA5Q86WW8 74 aa5.12□□□□□ -1.59
NEK3-203ENST00000551355 RNF213Q63HN8 5207 aa5.11□□□□□ -1.59
NEK3-203ENST00000551355 LCA10Q71F78 164 aa5.1□□□□□ -1.59
NEK3-203ENST00000551355 SERP1Q9Y6X1 66 aa5.09□□□□□ -1.59
NEK3-203ENST00000551355 CSAG1Q6PB30 78 aa5.08□□□□□ -1.6
NEK3-203ENST00000551355 KRTAP4-2Q9BYR5 136 aa5.08□□□□□ -1.6
NEK3-203ENST00000551355 MT1HP80294 61 aa5.06□□□□□ -1.6
NEK3-203ENST00000551355 M0R2T5 61 aa5.04□□□□□ -1.6
NEK3-203ENST00000551355 RPS28P62857 69 aaKnown RBP5.04□□□□□ -1.6
NEK3-203ENST00000551355 A0A0A0MQY5 61 aa5.02□□□□□ -1.61
NEK3-203ENST00000551355 FLGP20930 4061 aaPredicted RBP5□□□□□ -1.61
NEK3-203ENST00000551355 LCE4AQ5TA78 99 aa5□□□□□ -1.61
NEK3-203ENST00000551355 FAT4Q6V0I7 4981 aa4.98□□□□□ -1.61
NEK3-203ENST00000551355 H0YAA0 97 aa4.97□□□□□ -1.61
NEK3-203ENST00000551355 SMIM26A0A096LP01 95 aa4.95□□□□□ -1.62
NEK3-203ENST00000551355 SEC61GP60059 68 aa4.94□□□□□ -1.62
NEK3-203ENST00000551355 KRTAP4-11Q9BYQ6 195 aa4.94□□□□□ -1.62
NEK3-203ENST00000551355 V9GYY9 64 aa4.93□□□□□ -1.62
NEK3-203ENST00000551355 KRTAP10-6P60371 365 aaPredicted RBP4.9□□□□□ -1.63
NEK3-203ENST00000551355 PRR15LQ9BU68 103 aa4.9□□□□□ -1.63
NEK3-203ENST00000551355 LINC01558Q9Y6Z2 57 aa4.89□□□□□ -1.63
NEK3-203ENST00000551355 A0A1B0GU69 56 aa4.88□□□□□ -1.63
NEK3-203ENST00000551355 Q1T7F1 81 aa4.88□□□□□ -1.63
NEK3-203ENST00000551355 KRTAP19-4Q3LI73 84 aa4.88□□□□□ -1.63
NEK3-203ENST00000551355 ADM2Q7Z4H4 148 aa4.88□□□□□ -1.63
NEK3-203ENST00000551355 KRTAP9-8Q9BYQ0 159 aa4.85□□□□□ -1.63
NEK3-203ENST00000551355 CRIPTQ9P021 101 aa4.84□□□□□ -1.63
NEK3-203ENST00000551355 KRTAP9-7A8MTY7 169 aa4.83□□□□□ -1.64
NEK3-203ENST00000551355 MT2AP02795 61 aa4.82□□□□□ -1.64
NEK3-203ENST00000551355 KRTAP10-10P60014 251 aa4.81□□□□□ -1.64
NEK3-203ENST00000551355 P0C880 135 aa4.79□□□□□ -1.64
NEK3-203ENST00000551355 A0A1B0GU33 70 aa4.77□□□□□ -1.65
NEK3-203ENST00000551355 M0QZ58 72 aa4.77□□□□□ -1.65
NEK3-203ENST00000551355 MT1FP04733 61 aa4.77□□□□□ -1.65
NEK3-203ENST00000551355 R4GN34 69 aa4.76□□□□□ -1.65
NEK3-203ENST00000551355 PSPHP1O15172 72 aa4.75□□□□□ -1.65
NEK3-203ENST00000551355 LCE5AQ5TCM9 118 aa4.75□□□□□ -1.65
NEK3-203ENST00000551355 UQCR11O14957 56 aa4.72□□□□□ -1.65
NEK3-203ENST00000551355 Q5VV11 94 aa4.71□□□□□ -1.66
NEK3-203ENST00000551355 SPRR2GQ9BYE4 73 aa4.7□□□□□ -1.66
NEK3-203ENST00000551355 KRTAP9-3Q9BYQ3 159 aa4.69□□□□□ -1.66
NEK3-203ENST00000551355 A6NED7 52 aa4.65□□□□□ -1.67
NEK3-203ENST00000551355 MIR22HGQ0VDD5 57 aa4.63□□□□□ -1.67
NEK3-203ENST00000551355 KRTAP13-4Q3LI77 160 aa4.63□□□□□ -1.67
NEK3-203ENST00000551355 SPATA8Q6RVD6 105 aa4.63□□□□□ -1.67
NEK3-203ENST00000551355 A6NN06 94 aa4.61□□□□□ -1.67
NEK3-203ENST00000551355 KRTAP5-3Q6L8H2 238 aa4.61□□□□□ -1.67
NEK3-203ENST00000551355 LINC01554Q52M75 96 aa4.6□□□□□ -1.67
NEK3-203ENST00000551355 KRTAP19-8Q3LI54 63 aa4.59□□□□□ -1.67
NEK3-203ENST00000551355 A0A0D9SG42 100 aa4.56□□□□□ -1.68
NEK3-203ENST00000551355 PLAC4Q8WY50 150 aa4.55□□□□□ -1.68
NEK3-203ENST00000551355 CDC42SE1Q9NRR8 79 aa4.55□□□□□ -1.68
NEK3-203ENST00000551355 A8MU10 97 aa4.53□□□□□ -1.68
NEK3-203ENST00000551355 K7ERS5 55 aa4.52□□□□□ -1.69
NEK3-203ENST00000551355 MT1BP07438 61 aa4.49□□□□□ -1.69
NEK3-203ENST00000551355 KRTAP12-1P59990 96 aa4.49□□□□□ -1.69
NEK3-203ENST00000551355 SPINT4Q6UDR6 99 aa4.49□□□□□ -1.69
NEK3-203ENST00000551355 BRK1Q8WUW1 75 aa4.46□□□□□ -1.7
NEK3-203ENST00000551355 KRTAP12-2P59991 146 aa4.45□□□□□ -1.7
NEK3-203ENST00000551355 CAMK2N1Q7Z7J9 78 aa4.44□□□□□ -1.7
NEK3-203ENST00000551355 KRTAP15-1Q3LI76 137 aa4.42□□□□□ -1.7
NEK3-203ENST00000551355 PRO2289Q9P1D8 64 aa4.41□□□□□ -1.7
NEK3-203ENST00000551355 KRTAP19-6Q3LI70 58 aa4.37□□□□□ -1.71
NEK3-203ENST00000551355 KRTAP10-5P60370 271 aa4.34□□□□□ -1.71
NEK3-203ENST00000551355 PRO0628Q9UI54 55 aa4.33□□□□□ -1.72
NEK3-203ENST00000551355 USH2AO75445 5202 aa4.33□□□□□ -1.72
NEK3-203ENST00000551355 MT1XP80297 61 aa4.32□□□□□ -1.72
NEK3-203ENST00000551355 CRCT1Q9UGL9 99 aa4.3□□□□□ -1.72
NEK3-203ENST00000551355 ROMO1P60602 79 aa4.25□□□□□ -1.73
NEK3-203ENST00000551355 FSIP2Q5CZC0 6907 aa4.24□□□□□ -1.73
NEK3-203ENST00000551355 PMAIP1Q13794 54 aa4.24□□□□□ -1.73
NEK3-203ENST00000551355 C10orf95Q9H7T3 257 aa4.24□□□□□ -1.73
NEK3-203ENST00000551355 SSPOA2VEC9 5147 aa4.22□□□□□ -1.73
NEK3-203ENST00000551355 TNP1P09430 55 aa4.21□□□□□ -1.74
NEK3-203ENST00000551355 KRTAP25-1Q3LHN0 102 aa4.19□□□□□ -1.74
NEK3-203ENST00000551355 PRAC1Q96KF2 57 aa4.14□□□□□ -1.75
NEK3-203ENST00000551355 KRTAP10-12P60413 245 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 123.5 ms