RNA–Protein interactions for RNA: ENST00000550828.1

ERBB3-215, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 1 (best)

Gene ERBB3, Length 266 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-215ENST00000550828 CYSTM1Q9H1C7 97 aa6.51□□□□□ -1.37
ERBB3-215ENST00000550828 LCA10Q71F78 164 aa6.48□□□□□ -1.37
ERBB3-215ENST00000550828 DMAC1Q96GE9 116 aa6.48□□□□□ -1.37
ERBB3-215ENST00000550828 KRTAP3-3Q9BYR6 98 aa6.48□□□□□ -1.37
ERBB3-215ENST00000550828 S4R3F8 94 aa6.48□□□□□ -1.37
ERBB3-215ENST00000550828 KRTAP9-8Q9BYQ0 159 aa6.47□□□□□ -1.37
ERBB3-215ENST00000550828 A8MUN3 132 aa6.46□□□□□ -1.38
ERBB3-215ENST00000550828 CCDC179H3BU77 68 aa6.44□□□□□ -1.38
ERBB3-215ENST00000550828 MT2AP02795 61 aa6.42□□□□□ -1.38
ERBB3-215ENST00000550828 H7BZZ5 65 aa6.41□□□□□ -1.38
ERBB3-215ENST00000550828 SPANXA2-OT1Q8N9U9 137 aa6.4□□□□□ -1.38
ERBB3-215ENST00000550828 MT1FP04733 61 aa6.38□□□□□ -1.39
ERBB3-215ENST00000550828 NDUFC1O43677 76 aa6.35□□□□□ -1.39
ERBB3-215ENST00000550828 CSAG1Q6PB30 78 aa6.35□□□□□ -1.39
ERBB3-215ENST00000550828 ACYP2P14621 99 aa6.32□□□□□ -1.4
ERBB3-215ENST00000550828 KRTAP10-10P60014 251 aa6.28□□□□□ -1.4
ERBB3-215ENST00000550828 KRTAP9-3Q9BYQ3 159 aa6.25□□□□□ -1.41
ERBB3-215ENST00000550828 COA5Q86WW8 74 aa6.23□□□□□ -1.41
ERBB3-215ENST00000550828 SSPOA2VEC9 5147 aa6.19□□□□□ -1.42
ERBB3-215ENST00000550828 H0YAA0 97 aa6.19□□□□□ -1.42
ERBB3-215ENST00000550828 CHKB-CPT1BH3BT56 60 aa6.19□□□□□ -1.42
ERBB3-215ENST00000550828 LCE2BO14633 110 aa6.16□□□□□ -1.42
ERBB3-215ENST00000550828 ADM2Q7Z4H4 148 aa6.16□□□□□ -1.42
ERBB3-215ENST00000550828 KRTAP19-1Q8IUB9 90 aa6.16□□□□□ -1.42
ERBB3-215ENST00000550828 KRTAP3-2Q9BYR7 98 aa6.16□□□□□ -1.42
ERBB3-215ENST00000550828 TMEM258P61165 79 aa6.15□□□□□ -1.42
ERBB3-215ENST00000550828 USH2AO75445 5202 aa6.15□□□□□ -1.43
ERBB3-215ENST00000550828 FCGBPQ9Y6R7 5405 aaPredicted RBP6.14□□□□□ -1.43
ERBB3-215ENST00000550828 ATP5EP56381 51 aaPredicted RBP6.14□□□□□ -1.43
ERBB3-215ENST00000550828 P0C880 135 aa6.13□□□□□ -1.43
ERBB3-215ENST00000550828 PCP4P48539 62 aa6.13□□□□□ -1.43
ERBB3-215ENST00000550828 SPTSSBQ8NFR3 76 aa6.12□□□□□ -1.43
ERBB3-215ENST00000550828 SYNE2Q8WXH0 6885 aaKnown RBP6.1□□□□□ -1.43
ERBB3-215ENST00000550828 MACF1Q9UPN3 7388 aaKnown RBP6.09□□□□□ -1.43
ERBB3-215ENST00000550828 SPRR2GQ9BYE4 73 aa6.07□□□□□ -1.44
ERBB3-215ENST00000550828 CRIPTQ9P021 101 aa6.02□□□□□ -1.45
ERBB3-215ENST00000550828 KRTAP19-8Q3LI54 63 aa5.99□□□□□ -1.45
ERBB3-215ENST00000550828 KRTAP6-3Q3LI67 103 aa5.98□□□□□ -1.45
ERBB3-215ENST00000550828 MT1BP07438 61 aa5.97□□□□□ -1.45
ERBB3-215ENST00000550828 SERP1Q9Y6X1 66 aa5.97□□□□□ -1.45
ERBB3-215ENST00000550828 KRTAP19-6Q3LI70 58 aa5.96□□□□□ -1.46
ERBB3-215ENST00000550828 M0QZ58 72 aa5.93□□□□□ -1.46
ERBB3-215ENST00000550828 KRTAP13-4Q3LI77 160 aa5.92□□□□□ -1.46
ERBB3-215ENST00000550828 R4GN34 69 aa5.91□□□□□ -1.46
ERBB3-215ENST00000550828 Q5VV11 94 aa5.89□□□□□ -1.47
ERBB3-215ENST00000550828 LINC01558Q9Y6Z2 57 aa5.87□□□□□ -1.47
ERBB3-215ENST00000550828 A0A1B0GU69 56 aa5.85□□□□□ -1.47
ERBB3-215ENST00000550828 SEC61GP60059 68 aa5.85□□□□□ -1.47
ERBB3-215ENST00000550828 LINC01554Q52M75 96 aa5.82□□□□□ -1.48
ERBB3-215ENST00000550828 A0A1B0GU33 70 aa5.8□□□□□ -1.48
ERBB3-215ENST00000550828 NEBP20929 6669 aa5.8□□□□□ -1.48
ERBB3-215ENST00000550828 SPATA8Q6RVD6 105 aa5.78□□□□□ -1.48
ERBB3-215ENST00000550828 RPS28P62857 69 aaKnown RBP5.77□□□□□ -1.49
ERBB3-215ENST00000550828 KRTAP20-1Q3LI63 56 aa5.76□□□□□ -1.49
ERBB3-215ENST00000550828 SMIM26A0A096LP01 95 aa5.74□□□□□ -1.49
ERBB3-215ENST00000550828 Q1T7F1 81 aa5.73□□□□□ -1.49
ERBB3-215ENST00000550828 PRR15LQ9BU68 103 aa5.73□□□□□ -1.49
ERBB3-215ENST00000550828 KRTAP10-5P60370 271 aa5.71□□□□□ -1.5
ERBB3-215ENST00000550828 A0A0D9SG42 100 aa5.69□□□□□ -1.5
ERBB3-215ENST00000550828 A6NN06 94 aa5.69□□□□□ -1.5
ERBB3-215ENST00000550828 PLAC4Q8WY50 150 aa5.69□□□□□ -1.5
ERBB3-215ENST00000550828 MT1XP80297 61 aa5.68□□□□□ -1.5
ERBB3-215ENST00000550828 A8MU10 97 aa5.67□□□□□ -1.5
ERBB3-215ENST00000550828 PSPHP1O15172 72 aa5.67□□□□□ -1.5
ERBB3-215ENST00000550828 V9GYY9 64 aa5.67□□□□□ -1.5
ERBB3-215ENST00000550828 KRTAP12-1P59990 96 aa5.63□□□□□ -1.51
ERBB3-215ENST00000550828 KRTAP12-2P59991 146 aa5.6□□□□□ -1.51
ERBB3-215ENST00000550828 UQCR11O14957 56 aa5.59□□□□□ -1.51
ERBB3-215ENST00000550828 SPINT4Q6UDR6 99 aa5.55□□□□□ -1.52
ERBB3-215ENST00000550828 PRO2289Q9P1D8 64 aa5.53□□□□□ -1.52
ERBB3-215ENST00000550828 MUC12Q9UKN1 5478 aa5.52□□□□□ -1.53
ERBB3-215ENST00000550828 KRTAP5-9P26371 169 aa5.52□□□□□ -1.53
ERBB3-215ENST00000550828 MIR22HGQ0VDD5 57 aa5.52□□□□□ -1.53
ERBB3-215ENST00000550828 KRTAP2-3P0C7H8 128 aa5.49□□□□□ -1.53
ERBB3-215ENST00000550828 CAMK2N1Q7Z7J9 78 aa5.49□□□□□ -1.53
ERBB3-215ENST00000550828 KRTAP2-4Q9BYR9 128 aa5.49□□□□□ -1.53
ERBB3-215ENST00000550828 A6NED7 52 aa5.46□□□□□ -1.54
ERBB3-215ENST00000550828 KRTAP10-7P60409 375 aaPredicted RBP5.44□□□□□ -1.54
ERBB3-215ENST00000550828 KRTAP10-12P60413 245 aa5.37□□□□□ -1.55
ERBB3-215ENST00000550828 C10orf95Q9H7T3 257 aa5.36□□□□□ -1.55
ERBB3-215ENST00000550828 KMT2DO14686 5537 aa5.36□□□□□ -1.55
ERBB3-215ENST00000550828 KRTAP4-8A0A0G2JLE6 195 aa5.32□□□□□ -1.56
ERBB3-215ENST00000550828 KRTAP4-8Q9BYQ9 185 aa5.32□□□□□ -1.56
ERBB3-215ENST00000550828 CDC42SE1Q9NRR8 79 aa5.32□□□□□ -1.56
ERBB3-215ENST00000550828 MDN1Q9NU22 5596 aa5.3□□□□□ -1.56
ERBB3-215ENST00000550828 KRTAP2-2Q9BYT5 123 aa5.28□□□□□ -1.56
ERBB3-215ENST00000550828 KRTAP2-1Q9BYU5 128 aa5.28□□□□□ -1.56
ERBB3-215ENST00000550828 SPRR2EP22531 72 aa5.27□□□□□ -1.57
ERBB3-215ENST00000550828 SPRR2BP35325 72 aa5.27□□□□□ -1.57
ERBB3-215ENST00000550828 SPRR2AP35326 72 aa5.27□□□□□ -1.57
ERBB3-215ENST00000550828 K7ERS5 55 aa5.25□□□□□ -1.57
ERBB3-215ENST00000550828 SPRR2FQ96RM1 72 aa5.23□□□□□ -1.57
ERBB3-215ENST00000550828 KRTAP8-1Q8IUC2 63 aa5.21□□□□□ -1.58
ERBB3-215ENST00000550828 TNP1P09430 55 aa5.16□□□□□ -1.58
ERBB3-215ENST00000550828 BRK1Q8WUW1 75 aa5.13□□□□□ -1.59
ERBB3-215ENST00000550828 LCE1AQ5T7P2 110 aa5.12□□□□□ -1.59
ERBB3-215ENST00000550828 LCE3AQ5TA76 89 aa5.11□□□□□ -1.59
ERBB3-215ENST00000550828 SPRR2DP22532 72 aa5.1□□□□□ -1.59
ERBB3-215ENST00000550828 KRTAP25-1Q3LHN0 102 aa5.08□□□□□ -1.6
ERBB3-215ENST00000550828 KRTAP19-7Q3SYF9 63 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 350.2 ms