RNA–Protein interactions for RNA: ENST00000548431.1

CALCOCO1-211, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 2

Gene CALCOCO1, Length 612 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-211ENST00000548431 KRTAP19-2Q3LHN2 52 aa3.55□□□□□ -1.84
CALCOCO1-211ENST00000548431 SPTSSBQ8NFR3 76 aa3.55□□□□□ -1.84
CALCOCO1-211ENST00000548431 S4R3F8 94 aa3.55□□□□□ -1.84
CALCOCO1-211ENST00000548431 FLGP20930 4061 aaPredicted RBP3.54□□□□□ -1.84
CALCOCO1-211ENST00000548431 KRTAP3-1Q9BYR8 98 aa3.54□□□□□ -1.84
CALCOCO1-211ENST00000548431 CYSTM1Q9H1C7 97 aa3.54□□□□□ -1.84
CALCOCO1-211ENST00000548431 CHKB-CPT1BH3BT56 60 aa3.53□□□□□ -1.84
CALCOCO1-211ENST00000548431 LCE2AQ5TA79 106 aaPredicted RBP3.53□□□□□ -1.84
CALCOCO1-211ENST00000548431 LCE2CQ5TA81 110 aa3.53□□□□□ -1.84
CALCOCO1-211ENST00000548431 M0R2T5 61 aa3.52□□□□□ -1.85
CALCOCO1-211ENST00000548431 CSAG1Q6PB30 78 aa3.52□□□□□ -1.85
CALCOCO1-211ENST00000548431 MT1HP80294 61 aa3.5□□□□□ -1.85
CALCOCO1-211ENST00000548431 LCA10Q71F78 164 aa3.5□□□□□ -1.85
CALCOCO1-211ENST00000548431 COA5Q86WW8 74 aa3.48□□□□□ -1.85
CALCOCO1-211ENST00000548431 SERP1Q9Y6X1 66 aa3.45□□□□□ -1.86
CALCOCO1-211ENST00000548431 H0YAA0 97 aa3.43□□□□□ -1.86
CALCOCO1-211ENST00000548431 SEC61GP60059 68 aa3.41□□□□□ -1.86
CALCOCO1-211ENST00000548431 KRTAP10-6P60371 365 aaPredicted RBP3.4□□□□□ -1.87
CALCOCO1-211ENST00000548431 RPS28P62857 69 aaKnown RBP3.4□□□□□ -1.87
CALCOCO1-211ENST00000548431 LORP23490 312 aaPredicted RBP3.38□□□□□ -1.87
CALCOCO1-211ENST00000548431 PRR15LQ9BU68 103 aa3.38□□□□□ -1.87
CALCOCO1-211ENST00000548431 V9GYY9 64 aa3.38□□□□□ -1.87
CALCOCO1-211ENST00000548431 CRIPTQ9P021 101 aa3.37□□□□□ -1.87
CALCOCO1-211ENST00000548431 SMIM26A0A096LP01 95 aa3.35□□□□□ -1.87
CALCOCO1-211ENST00000548431 A0A1B0GU69 56 aa3.35□□□□□ -1.87
CALCOCO1-211ENST00000548431 ADM2Q7Z4H4 148 aa3.35□□□□□ -1.87
CALCOCO1-211ENST00000548431 KRTAP10-10P60014 251 aa3.33□□□□□ -1.88
CALCOCO1-211ENST00000548431 KRTAP9-8Q9BYQ0 159 aa3.33□□□□□ -1.88
CALCOCO1-211ENST00000548431 MT2AP02795 61 aa3.32□□□□□ -1.88
CALCOCO1-211ENST00000548431 LINC01558Q9Y6Z2 57 aa3.32□□□□□ -1.88
CALCOCO1-211ENST00000548431 Q1T7F1 81 aa3.31□□□□□ -1.88
CALCOCO1-211ENST00000548431 R4GN34 69 aa3.3□□□□□ -1.88
CALCOCO1-211ENST00000548431 M0QZ58 72 aa3.29□□□□□ -1.88
CALCOCO1-211ENST00000548431 MT1FP04733 61 aa3.28□□□□□ -1.88
CALCOCO1-211ENST00000548431 P0C880 135 aa3.27□□□□□ -1.89
CALCOCO1-211ENST00000548431 KRTAP9-2Q9BYQ4 174 aa3.27□□□□□ -1.89
CALCOCO1-211ENST00000548431 A0A1B0GU33 70 aa3.26□□□□□ -1.89
CALCOCO1-211ENST00000548431 Q5VV11 94 aa3.25□□□□□ -1.89
CALCOCO1-211ENST00000548431 SPRR2GQ9BYE4 73 aa3.25□□□□□ -1.89
CALCOCO1-211ENST00000548431 UQCR11O14957 56 aa3.23□□□□□ -1.89
CALCOCO1-211ENST00000548431 KRTAP9-3Q9BYQ3 159 aa3.23□□□□□ -1.89
CALCOCO1-211ENST00000548431 PSPHP1O15172 72 aa3.21□□□□□ -1.9
CALCOCO1-211ENST00000548431 USH2AO75445 5202 aa3.2□□□□□ -1.9
CALCOCO1-211ENST00000548431 A6NN06 94 aa3.19□□□□□ -1.9
CALCOCO1-211ENST00000548431 FSIP2Q5CZC0 6907 aa3.19□□□□□ -1.9
CALCOCO1-211ENST00000548431 KRTAP19-1Q8IUB9 90 aa3.18□□□□□ -1.9
CALCOCO1-211ENST00000548431 A6NED7 52 aa3.17□□□□□ -1.9
CALCOCO1-211ENST00000548431 LINC01554Q52M75 96 aa3.17□□□□□ -1.9
CALCOCO1-211ENST00000548431 KRTAP4-8Q9BYQ9 185 aa3.17□□□□□ -1.9
CALCOCO1-211ENST00000548431 MIR22HGQ0VDD5 57 aa3.16□□□□□ -1.9
CALCOCO1-211ENST00000548431 KRTAP19-8Q3LI54 63 aa3.16□□□□□ -1.9
CALCOCO1-211ENST00000548431 PLAC4Q8WY50 150 aa3.16□□□□□ -1.9
CALCOCO1-211ENST00000548431 SSPOA2VEC9 5147 aa3.15□□□□□ -1.9
CALCOCO1-211ENST00000548431 SPATA8Q6RVD6 105 aa3.15□□□□□ -1.91
CALCOCO1-211ENST00000548431 K7ERS5 55 aa3.13□□□□□ -1.91
CALCOCO1-211ENST00000548431 KRTAP13-4Q3LI77 160 aa3.13□□□□□ -1.91
CALCOCO1-211ENST00000548431 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.12□□□□□ -1.91
CALCOCO1-211ENST00000548431 A0A0D9SG42 100 aa3.11□□□□□ -1.91
CALCOCO1-211ENST00000548431 KRTAP9-6A0A140TA67 174 aa3.1□□□□□ -1.91
CALCOCO1-211ENST00000548431 KRTAP5-3Q6L8H2 238 aa3.1□□□□□ -1.91
CALCOCO1-211ENST00000548431 CDC42SE1Q9NRR8 79 aa3.09□□□□□ -1.91
CALCOCO1-211ENST00000548431 MT1BP07438 61 aa3.08□□□□□ -1.92
CALCOCO1-211ENST00000548431 SPINT4Q6UDR6 99 aa3.08□□□□□ -1.92
CALCOCO1-211ENST00000548431 PRO2289Q9P1D8 64 aa3.08□□□□□ -1.92
CALCOCO1-211ENST00000548431 CRCT1Q9UGL9 99 aa3.08□□□□□ -1.92
CALCOCO1-211ENST00000548431 KRTAP4-8A0A0G2JLE6 195 aa3.07□□□□□ -1.92
CALCOCO1-211ENST00000548431 A8MU10 97 aa3.07□□□□□ -1.92
CALCOCO1-211ENST00000548431 CAMK2N1Q7Z7J9 78 aa3.07□□□□□ -1.92
CALCOCO1-211ENST00000548431 KRTAP12-1P59990 96 aa3.05□□□□□ -1.92
CALCOCO1-211ENST00000548431 LCE3BQ5TA77 95 aa3.04□□□□□ -1.92
CALCOCO1-211ENST00000548431 KRTAP12-2P59991 146 aa3.03□□□□□ -1.92
CALCOCO1-211ENST00000548431 KRTAP19-6Q3LI70 58 aa3.03□□□□□ -1.92
CALCOCO1-211ENST00000548431 BRK1Q8WUW1 75 aa3.02□□□□□ -1.93
CALCOCO1-211ENST00000548431 KRTAP4-7Q9BYR0 210 aa3.02□□□□□ -1.93
CALCOCO1-211ENST00000548431 FCGBPQ9Y6R7 5405 aaPredicted RBP3.02□□□□□ -1.93
CALCOCO1-211ENST00000548431 KRTAP10-5P60370 271 aa3□□□□□ -1.93
CALCOCO1-211ENST00000548431 MT1XP80297 61 aa2.96□□□□□ -1.94
CALCOCO1-211ENST00000548431 KRTAP9-9Q9BYP9 154 aa2.92□□□□□ -1.94
CALCOCO1-211ENST00000548431 KRTAP9-4Q9BYQ2 154 aa2.92□□□□□ -1.94
CALCOCO1-211ENST00000548431 PRO0628Q9UI54 55 aa2.92□□□□□ -1.94
CALCOCO1-211ENST00000548431 TNP1P09430 55 aa2.91□□□□□ -1.94
CALCOCO1-211ENST00000548431 ROMO1P60602 79 aa2.9□□□□□ -1.95
CALCOCO1-211ENST00000548431 MACF1Q9UPN3 7388 aaKnown RBP2.9□□□□□ -1.95
CALCOCO1-211ENST00000548431 KRTAP25-1Q3LHN0 102 aa2.89□□□□□ -1.95
CALCOCO1-211ENST00000548431 KRTAP4-12Q9BQ66 201 aa2.89□□□□□ -1.95
CALCOCO1-211ENST00000548431 C10orf95Q9H7T3 257 aa2.88□□□□□ -1.95
CALCOCO1-211ENST00000548431 PMAIP1Q13794 54 aa2.87□□□□□ -1.95
CALCOCO1-211ENST00000548431 KRTAP4-2Q9BYR5 136 aa2.87□□□□□ -1.95
CALCOCO1-211ENST00000548431 SYNE2Q8WXH0 6885 aaKnown RBP2.86□□□□□ -1.95
CALCOCO1-211ENST00000548431 KRTAP10-12P60413 245 aa2.85□□□□□ -1.95
CALCOCO1-211ENST00000548431 KRTAP23-1A1A580 65 aa2.82□□□□□ -1.96
CALCOCO1-211ENST00000548431 KRTAP9-7A8MTY7 169 aa2.81□□□□□ -1.96
CALCOCO1-211ENST00000548431 KRTAP10-7P60409 375 aaPredicted RBP2.81□□□□□ -1.96
CALCOCO1-211ENST00000548431 LCE1DQ5T752 114 aa2.81□□□□□ -1.96
CALCOCO1-211ENST00000548431 PP632Q6XCG6 107 aa2.8□□□□□ -1.96
CALCOCO1-211ENST00000548431 KRTAP4-9Q9BYQ8 210 aa2.78□□□□□ -1.96
CALCOCO1-211ENST00000548431 KMT2DO14686 5537 aa2.78□□□□□ -1.96
CALCOCO1-211ENST00000548431 KRTAP8-1Q8IUC2 63 aa2.77□□□□□ -1.97
CALCOCO1-211ENST00000548431 LCE3AQ5TA76 89 aa2.72□□□□□ -1.97
CALCOCO1-211ENST00000548431 KTN1-AS1Q86SY8 53 aa2.72□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms