RNA–Protein interactions for RNA: ENST00000543695.5

LDHA-222, Transcript of lactate dehydrogenase A, humanhuman

TSL 5

Gene LDHA, Length 554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-222ENST00000543695 A8MUN3 132 aa6.22□□□□□ -1.41
LDHA-222ENST00000543695 PSPHP1O15172 72 aa6.22□□□□□ -1.41
LDHA-222ENST00000543695 BRK1Q8WUW1 75 aa6.21□□□□□ -1.42
LDHA-222ENST00000543695 LINC01558Q9Y6Z2 57 aa6.21□□□□□ -1.42
LDHA-222ENST00000543695 UBR4Q5T4S7 5183 aa6.2□□□□□ -1.42
LDHA-222ENST00000543695 Q5VV11 94 aa6.2□□□□□ -1.42
LDHA-222ENST00000543695 PRR15LQ9BU68 103 aa6.19□□□□□ -1.42
LDHA-222ENST00000543695 A8MUU9 505 aa6.18□□□□□ -1.42
LDHA-222ENST00000543695 Q75L30 129 aa6.18□□□□□ -1.42
LDHA-222ENST00000543695 IGKV2D-30A0A075B6S6 120 aa6.17□□□□□ -1.42
LDHA-222ENST00000543695 C7orf65Q6ZTY9 151 aa6.17□□□□□ -1.42
LDHA-222ENST00000543695 C20orf166-AS1Q96NR2 134 aa6.17□□□□□ -1.42
LDHA-222ENST00000543695 LCE1DQ5T752 114 aa6.15□□□□□ -1.42
LDHA-222ENST00000543695 LRP2P98164 4655 aa6.14□□□□□ -1.43
LDHA-222ENST00000543695 CHKB-CPT1BH3BT56 60 aa6.14□□□□□ -1.43
LDHA-222ENST00000543695 C9orf92A6NGG3 77 aa6.11□□□□□ -1.43
LDHA-222ENST00000543695 A6NED7 52 aa6.05□□□□□ -1.44
LDHA-222ENST00000543695 KRTAP4-9Q9BYQ8 210 aa6.02□□□□□ -1.45
LDHA-222ENST00000543695 CDC42SE1Q9NRR8 79 aa6.02□□□□□ -1.45
LDHA-222ENST00000543695 RNF213Q63HN8 5207 aa6.01□□□□□ -1.45
LDHA-222ENST00000543695 LPAP08519 4548 aa5.99□□□□□ -1.45
LDHA-222ENST00000543695 LCA10Q71F78 164 aa5.99□□□□□ -1.45
LDHA-222ENST00000543695 KRTAP4-2Q9BYR5 136 aa5.99□□□□□ -1.45
LDHA-222ENST00000543695 A0A1B0GU69 56 aa5.98□□□□□ -1.45
LDHA-222ENST00000543695 SPINK7P58062 85 aa5.98□□□□□ -1.45
LDHA-222ENST00000543695 SPTSSBQ8NFR3 76 aa5.97□□□□□ -1.45
LDHA-222ENST00000543695 ATP11AUNQ6ZP68 121 aa5.96□□□□□ -1.46
LDHA-222ENST00000543695 A8MU10 97 aa5.95□□□□□ -1.46
LDHA-222ENST00000543695 RPL37P61927 97 aaKnown RBP5.95□□□□□ -1.46
LDHA-222ENST00000543695 KRTAP3-1Q9BYR8 98 aa5.92□□□□□ -1.46
LDHA-222ENST00000543695 COX6B2Q6YFQ2 88 aa5.91□□□□□ -1.46
LDHA-222ENST00000543695 PMAIP1Q13794 54 aa5.87□□□□□ -1.47
LDHA-222ENST00000543695 SPATA8Q6RVD6 105 aa5.87□□□□□ -1.47
LDHA-222ENST00000543695 UQCR11O14957 56 aa5.86□□□□□ -1.47
LDHA-222ENST00000543695 SEC61GP60059 68 aa5.86□□□□□ -1.47
LDHA-222ENST00000543695 TPRXLQ17RH7 258 aa5.84□□□□□ -1.47
LDHA-222ENST00000543695 A6NN06 94 aa5.83□□□□□ -1.48
LDHA-222ENST00000543695 MIR22HGQ0VDD5 57 aa5.83□□□□□ -1.48
LDHA-222ENST00000543695 MUC2Q02817 5179 aa5.83□□□□□ -1.48
LDHA-222ENST00000543695 KTN1-AS1Q86SY8 53 aa5.76□□□□□ -1.49
LDHA-222ENST00000543695 KRTAP4-11Q9BYQ6 195 aa5.76□□□□□ -1.49
LDHA-222ENST00000543695 H1FX-AS1Q4G0G2 97 aa5.72□□□□□ -1.49
LDHA-222ENST00000543695 A0A1B0GU33 70 aa5.7□□□□□ -1.5
LDHA-222ENST00000543695 S4R3F8 94 aa5.7□□□□□ -1.5
LDHA-222ENST00000543695 SEC61BP60468 96 aaKnown RBP5.69□□□□□ -1.5
LDHA-222ENST00000543695 H0YAA0 97 aa5.67□□□□□ -1.5
LDHA-222ENST00000543695 MUC17Q685J3 4493 aa5.67□□□□□ -1.5
LDHA-222ENST00000543695 FAT4Q6V0I7 4981 aa5.67□□□□□ -1.5
LDHA-222ENST00000543695 RBM12B-AS1Q9P1G2 102 aa5.63□□□□□ -1.51
LDHA-222ENST00000543695 KRTAP10-6P60371 365 aaPredicted RBP5.6□□□□□ -1.51
LDHA-222ENST00000543695 LCE4AQ5TA78 99 aa5.6□□□□□ -1.51
LDHA-222ENST00000543695 KRTAP4-1Q9BYQ7 146 aa5.59□□□□□ -1.51
LDHA-222ENST00000543695 KRTAP5-3Q6L8H2 238 aa5.57□□□□□ -1.52
LDHA-222ENST00000543695 CSAG1Q6PB30 78 aa5.53□□□□□ -1.52
LDHA-222ENST00000543695 K7ERS5 55 aa5.51□□□□□ -1.53
LDHA-222ENST00000543695 P0C880 135 aa5.48□□□□□ -1.53
LDHA-222ENST00000543695 KRTAP13-4Q3LI77 160 aa5.47□□□□□ -1.53
LDHA-222ENST00000543695 ADM2Q7Z4H4 148 aa5.47□□□□□ -1.53
LDHA-222ENST00000543695 PRAC1Q96KF2 57 aa5.47□□□□□ -1.53
LDHA-222ENST00000543695 KRTAP19-2Q3LHN2 52 aa5.44□□□□□ -1.54
LDHA-222ENST00000543695 LCE5AQ5TCM9 118 aa5.44□□□□□ -1.54
LDHA-222ENST00000543695 MT1HP80294 61 aa5.42□□□□□ -1.54
LDHA-222ENST00000543695 M0QZ58 72 aa5.4□□□□□ -1.54
LDHA-222ENST00000543695 KRTAP9-8Q9BYQ0 159 aa5.39□□□□□ -1.55
LDHA-222ENST00000543695 A0A0D9SG42 100 aa5.38□□□□□ -1.55
LDHA-222ENST00000543695 KRTAP9-7A8MTY7 169 aa5.38□□□□□ -1.55
LDHA-222ENST00000543695 M0R2T5 61 aa5.37□□□□□ -1.55
LDHA-222ENST00000543695 ROMO1P60602 79 aa5.34□□□□□ -1.55
LDHA-222ENST00000543695 CRCT1Q9UGL9 99 aa5.34□□□□□ -1.55
LDHA-222ENST00000543695 KRTAP12-1P59990 96 aa5.3□□□□□ -1.56
LDHA-222ENST00000543695 KRTAP25-1Q3LHN0 102 aa5.3□□□□□ -1.56
LDHA-222ENST00000543695 KRTAP12-2P59991 146 aa5.29□□□□□ -1.56
LDHA-222ENST00000543695 LINC01554Q52M75 96 aa5.28□□□□□ -1.56
LDHA-222ENST00000543695 FSIP2Q5CZC0 6907 aa5.26□□□□□ -1.57
LDHA-222ENST00000543695 SPINT4Q6UDR6 99 aa5.24□□□□□ -1.57
LDHA-222ENST00000543695 R4GN34 69 aa5.24□□□□□ -1.57
LDHA-222ENST00000543695 FLGP20930 4061 aaPredicted RBP5.23□□□□□ -1.57
LDHA-222ENST00000543695 KRTAP9-3Q9BYQ3 159 aa5.22□□□□□ -1.57
LDHA-222ENST00000543695 KRTAP19-4Q3LI73 84 aa5.15□□□□□ -1.59
LDHA-222ENST00000543695 CRIPTQ9P021 101 aa5.14□□□□□ -1.59
LDHA-222ENST00000543695 C10orf95Q9H7T3 257 aa5.04□□□□□ -1.6
LDHA-222ENST00000543695 MT2AP02795 61 aa5.03□□□□□ -1.6
LDHA-222ENST00000543695 KRTAP10-10P60014 251 aa5□□□□□ -1.61
LDHA-222ENST00000543695 MT1FP04733 61 aa4.98□□□□□ -1.61
LDHA-222ENST00000543695 CAMK2N1Q7Z7J9 78 aa4.95□□□□□ -1.62
LDHA-222ENST00000543695 USH2AO75445 5202 aa4.93□□□□□ -1.62
LDHA-222ENST00000543695 SPRR2GQ9BYE4 73 aa4.91□□□□□ -1.62
LDHA-222ENST00000543695 SSPOA2VEC9 5147 aa4.9□□□□□ -1.63
LDHA-222ENST00000543695 PP632Q6XCG6 107 aa4.85□□□□□ -1.63
LDHA-222ENST00000543695 FCGBPQ9Y6R7 5405 aaPredicted RBP4.83□□□□□ -1.64
LDHA-222ENST00000543695 PLAC4Q8WY50 150 aa4.83□□□□□ -1.64
LDHA-222ENST00000543695 KRTAP19-6Q3LI70 58 aa4.8□□□□□ -1.64
LDHA-222ENST00000543695 KRTAP23-1A1A580 65 aa4.79□□□□□ -1.64
LDHA-222ENST00000543695 TNP1P09430 55 aa4.79□□□□□ -1.64
LDHA-222ENST00000543695 KRTAP15-1Q3LI76 137 aa4.78□□□□□ -1.64
LDHA-222ENST00000543695 KRTAP19-8Q3LI54 63 aa4.76□□□□□ -1.65
LDHA-222ENST00000543695 MACF1Q9UPN3 7388 aaKnown RBP4.69□□□□□ -1.66
LDHA-222ENST00000543695 MT1BP07438 61 aa4.65□□□□□ -1.67
LDHA-222ENST00000543695 KRTAP6-3Q3LI67 103 aa4.62□□□□□ -1.67
LDHA-222ENST00000543695 SYNE2Q8WXH0 6885 aaKnown RBP4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms