RNA–Protein interactions for RNA: ENST00000539534.5

LMO3-221, Transcript of LIM domain only 3, humanhuman

TSL 4

Gene LMO3, Length 543 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-221ENST00000539534 ATP5EP56381 51 aaPredicted RBP6.26□□□□□ -1.41
LMO3-221ENST00000539534 PCP4P48539 62 aa6.25□□□□□ -1.41
LMO3-221ENST00000539534 DMAC1Q96GE9 116 aa6.25□□□□□ -1.41
LMO3-221ENST00000539534 H1FX-AS1Q4G0G2 97 aa6.24□□□□□ -1.41
LMO3-221ENST00000539534 ACYP2P14621 99 aa6.21□□□□□ -1.42
LMO3-221ENST00000539534 TMEM258P61165 79 aa6.21□□□□□ -1.42
LMO3-221ENST00000539534 KRTAP3-1Q9BYR8 98 aa6.18□□□□□ -1.42
LMO3-221ENST00000539534 CYSTM1Q9H1C7 97 aa6.18□□□□□ -1.42
LMO3-221ENST00000539534 MT1HP80294 61 aa6.16□□□□□ -1.42
LMO3-221ENST00000539534 S4R3F8 94 aa6.13□□□□□ -1.43
LMO3-221ENST00000539534 SPTSSBQ8NFR3 76 aa6.1□□□□□ -1.43
LMO3-221ENST00000539534 CHKB-CPT1BH3BT56 60 aa6.07□□□□□ -1.44
LMO3-221ENST00000539534 CSAG1Q6PB30 78 aa6.06□□□□□ -1.44
LMO3-221ENST00000539534 LCA10Q71F78 164 aa6.05□□□□□ -1.44
LMO3-221ENST00000539534 COA5Q86WW8 74 aa6.04□□□□□ -1.44
LMO3-221ENST00000539534 M0R2T5 61 aa6.02□□□□□ -1.45
LMO3-221ENST00000539534 SERP1Q9Y6X1 66 aa5.99□□□□□ -1.45
LMO3-221ENST00000539534 KRTAP10-6P60371 365 aaPredicted RBP5.98□□□□□ -1.45
LMO3-221ENST00000539534 H0YAA0 97 aa5.97□□□□□ -1.45
LMO3-221ENST00000539534 KRTAP4-8Q9BYQ9 185 aa5.94□□□□□ -1.46
LMO3-221ENST00000539534 RPS28P62857 69 aaKnown RBP5.93□□□□□ -1.46
LMO3-221ENST00000539534 KRTAP9-8Q9BYQ0 159 aa5.91□□□□□ -1.46
LMO3-221ENST00000539534 KRTAP19-1Q8IUB9 90 aa5.88□□□□□ -1.47
LMO3-221ENST00000539534 KRTAP9-2Q9BYQ4 174 aa5.85□□□□□ -1.47
LMO3-221ENST00000539534 MT2AP02795 61 aa5.84□□□□□ -1.47
LMO3-221ENST00000539534 SEC61GP60059 68 aa5.84□□□□□ -1.47
LMO3-221ENST00000539534 KRTAP4-12Q9BQ66 201 aa5.84□□□□□ -1.47
LMO3-221ENST00000539534 V9GYY9 64 aa5.84□□□□□ -1.47
LMO3-221ENST00000539534 SMIM26A0A096LP01 95 aa5.82□□□□□ -1.48
LMO3-221ENST00000539534 KRTAP9-6A0A140TA67 174 aa5.82□□□□□ -1.48
LMO3-221ENST00000539534 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.82□□□□□ -1.48
LMO3-221ENST00000539534 CRIPTQ9P021 101 aa5.82□□□□□ -1.48
LMO3-221ENST00000539534 MT1FP04733 61 aa5.79□□□□□ -1.48
LMO3-221ENST00000539534 PRR15LQ9BU68 103 aa5.79□□□□□ -1.48
LMO3-221ENST00000539534 ADM2Q7Z4H4 148 aa5.78□□□□□ -1.48
LMO3-221ENST00000539534 LINC01558Q9Y6Z2 57 aa5.78□□□□□ -1.48
LMO3-221ENST00000539534 KRTAP19-4Q3LI73 84 aa5.76□□□□□ -1.49
LMO3-221ENST00000539534 A0A1B0GU69 56 aa5.75□□□□□ -1.49
LMO3-221ENST00000539534 Q1T7F1 81 aa5.75□□□□□ -1.49
LMO3-221ENST00000539534 KRTAP10-10P60014 251 aa5.74□□□□□ -1.49
LMO3-221ENST00000539534 KRTAP9-3Q9BYQ3 159 aa5.72□□□□□ -1.49
LMO3-221ENST00000539534 M0QZ58 72 aa5.7□□□□□ -1.5
LMO3-221ENST00000539534 LCE3BQ5TA77 95 aa5.69□□□□□ -1.5
LMO3-221ENST00000539534 P0C880 135 aa5.68□□□□□ -1.5
LMO3-221ENST00000539534 R4GN34 69 aa5.66□□□□□ -1.5
LMO3-221ENST00000539534 USH2AO75445 5202 aa5.65□□□□□ -1.51
LMO3-221ENST00000539534 SPRR2GQ9BYE4 73 aa5.64□□□□□ -1.51
LMO3-221ENST00000539534 A0A1B0GU33 70 aa5.63□□□□□ -1.51
LMO3-221ENST00000539534 LCE4AQ5TA78 99 aa5.63□□□□□ -1.51
LMO3-221ENST00000539534 Q5VV11 94 aa5.63□□□□□ -1.51
LMO3-221ENST00000539534 UQCR11O14957 56 aa5.59□□□□□ -1.51
LMO3-221ENST00000539534 KRTAP9-7A8MTY7 169 aa5.57□□□□□ -1.52
LMO3-221ENST00000539534 KRTAP9-9Q9BYP9 154 aa5.57□□□□□ -1.52
LMO3-221ENST00000539534 KRTAP9-4Q9BYQ2 154 aa5.57□□□□□ -1.52
LMO3-221ENST00000539534 PSPHP1O15172 72 aa5.55□□□□□ -1.52
LMO3-221ENST00000539534 FSIP2Q5CZC0 6907 aa5.54□□□□□ -1.52
LMO3-221ENST00000539534 A6NN06 94 aa5.54□□□□□ -1.52
LMO3-221ENST00000539534 SSPOA2VEC9 5147 aa5.54□□□□□ -1.52
LMO3-221ENST00000539534 KRTAP19-8Q3LI54 63 aa5.52□□□□□ -1.53
LMO3-221ENST00000539534 KRTAP23-1A1A580 65 aa5.5□□□□□ -1.53
LMO3-221ENST00000539534 KRTAP13-4Q3LI77 160 aa5.47□□□□□ -1.53
LMO3-221ENST00000539534 A6NED7 52 aa5.45□□□□□ -1.54
LMO3-221ENST00000539534 MIR22HGQ0VDD5 57 aa5.45□□□□□ -1.54
LMO3-221ENST00000539534 SPATA8Q6RVD6 105 aa5.44□□□□□ -1.54
LMO3-221ENST00000539534 MT1BP07438 61 aa5.43□□□□□ -1.54
LMO3-221ENST00000539534 LINC01554Q52M75 96 aa5.43□□□□□ -1.54
LMO3-221ENST00000539534 PLAC4Q8WY50 150 aa5.41□□□□□ -1.54
LMO3-221ENST00000539534 CRCT1Q9UGL9 99 aa5.4□□□□□ -1.54
LMO3-221ENST00000539534 KRTAP4-8A0A0G2JLE6 195 aa5.37□□□□□ -1.55
LMO3-221ENST00000539534 CDC42SE1Q9NRR8 79 aa5.37□□□□□ -1.55
LMO3-221ENST00000539534 A0A0D9SG42 100 aa5.36□□□□□ -1.55
LMO3-221ENST00000539534 K7ERS5 55 aa5.35□□□□□ -1.55
LMO3-221ENST00000539534 KRTAP19-6Q3LI70 58 aa5.34□□□□□ -1.55
LMO3-221ENST00000539534 A8MU10 97 aa5.32□□□□□ -1.56
LMO3-221ENST00000539534 KRTAP12-1P59990 96 aa5.32□□□□□ -1.56
LMO3-221ENST00000539534 LCE1DQ5T752 114 aa5.32□□□□□ -1.56
LMO3-221ENST00000539534 FCGBPQ9Y6R7 5405 aaPredicted RBP5.31□□□□□ -1.56
LMO3-221ENST00000539534 SPINT4Q6UDR6 99 aa5.29□□□□□ -1.56
LMO3-221ENST00000539534 PRO2289Q9P1D8 64 aa5.29□□□□□ -1.56
LMO3-221ENST00000539534 KRTAP12-2P59991 146 aa5.26□□□□□ -1.57
LMO3-221ENST00000539534 CAMK2N1Q7Z7J9 78 aa5.26□□□□□ -1.57
LMO3-221ENST00000539534 SVIPQ8NHG7 77 aa5.26□□□□□ -1.57
LMO3-221ENST00000539534 KRTAP10-5P60370 271 aa5.22□□□□□ -1.57
LMO3-221ENST00000539534 BRK1Q8WUW1 75 aa5.2□□□□□ -1.58
LMO3-221ENST00000539534 MT1XP80297 61 aa5.18□□□□□ -1.58
LMO3-221ENST00000539534 LCE5AQ5TCM9 118 aa5.16□□□□□ -1.58
LMO3-221ENST00000539534 KRTAP4-7Q9BYR0 210 aa5.15□□□□□ -1.59
LMO3-221ENST00000539534 KRTAP4-9Q9BYQ8 210 aa5.13□□□□□ -1.59
LMO3-221ENST00000539534 PRO0628Q9UI54 55 aa5.06□□□□□ -1.6
LMO3-221ENST00000539534 KRTAP15-1Q3LI76 137 aa5.05□□□□□ -1.6
LMO3-221ENST00000539534 MACF1Q9UPN3 7388 aaKnown RBP5.05□□□□□ -1.6
LMO3-221ENST00000539534 TNP1P09430 55 aa5.01□□□□□ -1.61
LMO3-221ENST00000539534 ROMO1P60602 79 aa5.01□□□□□ -1.61
LMO3-221ENST00000539534 C10orf95Q9H7T3 257 aa5.01□□□□□ -1.61
LMO3-221ENST00000539534 KRTAP25-1Q3LHN0 102 aa5□□□□□ -1.61
LMO3-221ENST00000539534 KRTAP4-11Q9BYQ6 195 aa5□□□□□ -1.61
LMO3-221ENST00000539534 KRTAP10-12P60413 245 aa4.96□□□□□ -1.62
LMO3-221ENST00000539534 SYNE2Q8WXH0 6885 aaKnown RBP4.96□□□□□ -1.62
LMO3-221ENST00000539534 PMAIP1Q13794 54 aa4.95□□□□□ -1.62
LMO3-221ENST00000539534 KRTAP10-7P60409 375 aaPredicted RBP4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms