RNA–Protein interactions for RNA: ENST00000538363.1

TNFRSF1A-211, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 554 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-211ENST00000538363 A0A0U1RQV1 116 aa5.59□□□□□ -1.51
TNFRSF1A-211ENST00000538363 PCP4P48539 62 aa5.59□□□□□ -1.51
TNFRSF1A-211ENST00000538363 FAM236DA0A1B0GTK5 79 aa5.57□□□□□ -1.52
TNFRSF1A-211ENST00000538363 CCDC179H3BU77 68 aa5.57□□□□□ -1.52
TNFRSF1A-211ENST00000538363 FAM236CP0DP71 79 aa5.57□□□□□ -1.52
TNFRSF1A-211ENST00000538363 RBM12B-AS1Q9P1G2 102 aa5.57□□□□□ -1.52
TNFRSF1A-211ENST00000538363 KRTAP23-1A1A580 65 aa5.56□□□□□ -1.52
TNFRSF1A-211ENST00000538363 NDUFC1O43677 76 aa5.56□□□□□ -1.52
TNFRSF1A-211ENST00000538363 KLKP1Q107X0 134 aa5.54□□□□□ -1.52
TNFRSF1A-211ENST00000538363 HRES1P13985 223 aa5.53□□□□□ -1.52
TNFRSF1A-211ENST00000538363 RNF213Q63HN8 5207 aa5.53□□□□□ -1.52
TNFRSF1A-211ENST00000538363 C4orf26Q17RF5 130 aa5.52□□□□□ -1.53
TNFRSF1A-211ENST00000538363 MUC17Q685J3 4493 aa5.52□□□□□ -1.53
TNFRSF1A-211ENST00000538363 COX6B2Q6YFQ2 88 aa5.51□□□□□ -1.53
TNFRSF1A-211ENST00000538363 KRTAP4-1Q9BYQ7 146 aa5.46□□□□□ -1.54
TNFRSF1A-211ENST00000538363 H7BZZ5 65 aa5.44□□□□□ -1.54
TNFRSF1A-211ENST00000538363 SPANXA2-OT1Q8N9U9 137 aa5.44□□□□□ -1.54
TNFRSF1A-211ENST00000538363 ACYP2P14621 99 aa5.43□□□□□ -1.54
TNFRSF1A-211ENST00000538363 CYSTM1Q9H1C7 97 aa5.43□□□□□ -1.54
TNFRSF1A-211ENST00000538363 A8MUN3 132 aa5.42□□□□□ -1.54
TNFRSF1A-211ENST00000538363 CHKB-CPT1BH3BT56 60 aa5.41□□□□□ -1.54
TNFRSF1A-211ENST00000538363 ATP5EP56381 51 aaPredicted RBP5.41□□□□□ -1.54
TNFRSF1A-211ENST00000538363 TMEM258P61165 79 aa5.41□□□□□ -1.54
TNFRSF1A-211ENST00000538363 H1FX-AS1Q4G0G2 97 aa5.4□□□□□ -1.54
TNFRSF1A-211ENST00000538363 DMAC1Q96GE9 116 aa5.37□□□□□ -1.55
TNFRSF1A-211ENST00000538363 MPLKIPQ8TAP9 179 aa5.36□□□□□ -1.55
TNFRSF1A-211ENST00000538363 MUC2Q02817 5179 aa5.35□□□□□ -1.55
TNFRSF1A-211ENST00000538363 S4R3F8 94 aa5.35□□□□□ -1.55
TNFRSF1A-211ENST00000538363 SPTSSBQ8NFR3 76 aa5.33□□□□□ -1.56
TNFRSF1A-211ENST00000538363 M0R2T5 61 aa5.32□□□□□ -1.56
TNFRSF1A-211ENST00000538363 COA5Q86WW8 74 aa5.31□□□□□ -1.56
TNFRSF1A-211ENST00000538363 KRTAP15-1Q3LI76 137 aa5.29□□□□□ -1.56
TNFRSF1A-211ENST00000538363 CSAG1Q6PB30 78 aa5.26□□□□□ -1.57
TNFRSF1A-211ENST00000538363 LCA10Q71F78 164 aa5.26□□□□□ -1.57
TNFRSF1A-211ENST00000538363 SERP1Q9Y6X1 66 aa5.26□□□□□ -1.57
TNFRSF1A-211ENST00000538363 KRTAP19-2Q3LHN2 52 aa5.25□□□□□ -1.57
TNFRSF1A-211ENST00000538363 FAT4Q6V0I7 4981 aa5.23□□□□□ -1.57
TNFRSF1A-211ENST00000538363 SEC61GP60059 68 aa5.18□□□□□ -1.58
TNFRSF1A-211ENST00000538363 MT1HP80294 61 aa5.16□□□□□ -1.58
TNFRSF1A-211ENST00000538363 RPS28P62857 69 aaKnown RBP5.14□□□□□ -1.59
TNFRSF1A-211ENST00000538363 SMIM26A0A096LP01 95 aa5.11□□□□□ -1.59
TNFRSF1A-211ENST00000538363 FLGP20930 4061 aaPredicted RBP5.1□□□□□ -1.59
TNFRSF1A-211ENST00000538363 PRR15LQ9BU68 103 aa5.1□□□□□ -1.59
TNFRSF1A-211ENST00000538363 V9GYY9 64 aa5.1□□□□□ -1.59
TNFRSF1A-211ENST00000538363 A0A1B0GU69 56 aa5.09□□□□□ -1.59
TNFRSF1A-211ENST00000538363 ADM2Q7Z4H4 148 aa5.08□□□□□ -1.6
TNFRSF1A-211ENST00000538363 LINC01558Q9Y6Z2 57 aa5.03□□□□□ -1.6
TNFRSF1A-211ENST00000538363 H0YAA0 97 aa5.02□□□□□ -1.61
TNFRSF1A-211ENST00000538363 KRTAP10-10P60014 251 aa5.01□□□□□ -1.61
TNFRSF1A-211ENST00000538363 KRTAP10-6P60371 365 aaPredicted RBP5.01□□□□□ -1.61
TNFRSF1A-211ENST00000538363 Q1T7F1 81 aa5□□□□□ -1.61
TNFRSF1A-211ENST00000538363 PSPHP1O15172 72 aa4.99□□□□□ -1.61
TNFRSF1A-211ENST00000538363 A0A1B0GU33 70 aa4.96□□□□□ -1.62
TNFRSF1A-211ENST00000538363 KRTAP5-3Q6L8H2 238 aa4.96□□□□□ -1.62
TNFRSF1A-211ENST00000538363 P0C880 135 aa4.95□□□□□ -1.62
TNFRSF1A-211ENST00000538363 R4GN34 69 aa4.95□□□□□ -1.62
TNFRSF1A-211ENST00000538363 M0QZ58 72 aa4.93□□□□□ -1.62
TNFRSF1A-211ENST00000538363 MT2AP02795 61 aa4.93□□□□□ -1.62
TNFRSF1A-211ENST00000538363 CRIPTQ9P021 101 aa4.93□□□□□ -1.62
TNFRSF1A-211ENST00000538363 CRCT1Q9UGL9 99 aa4.92□□□□□ -1.62
TNFRSF1A-211ENST00000538363 KRTAP9-8Q9BYQ0 159 aa4.91□□□□□ -1.62
TNFRSF1A-211ENST00000538363 UQCR11O14957 56 aa4.89□□□□□ -1.63
TNFRSF1A-211ENST00000538363 A6NED7 52 aa4.88□□□□□ -1.63
TNFRSF1A-211ENST00000538363 MT1FP04733 61 aa4.88□□□□□ -1.63
TNFRSF1A-211ENST00000538363 LINC01554Q52M75 96 aa4.88□□□□□ -1.63
TNFRSF1A-211ENST00000538363 FSIP2Q5CZC0 6907 aa4.86□□□□□ -1.63
TNFRSF1A-211ENST00000538363 Q5VV11 94 aa4.85□□□□□ -1.63
TNFRSF1A-211ENST00000538363 SPATA8Q6RVD6 105 aa4.84□□□□□ -1.63
TNFRSF1A-211ENST00000538363 A0A0D9SG42 100 aa4.82□□□□□ -1.64
TNFRSF1A-211ENST00000538363 MIR22HGQ0VDD5 57 aa4.82□□□□□ -1.64
TNFRSF1A-211ENST00000538363 PLAC4Q8WY50 150 aa4.76□□□□□ -1.65
TNFRSF1A-211ENST00000538363 K7ERS5 55 aa4.75□□□□□ -1.65
TNFRSF1A-211ENST00000538363 KRTAP13-4Q3LI77 160 aa4.75□□□□□ -1.65
TNFRSF1A-211ENST00000538363 SPINT4Q6UDR6 99 aa4.75□□□□□ -1.65
TNFRSF1A-211ENST00000538363 SPRR2GQ9BYE4 73 aa4.75□□□□□ -1.65
TNFRSF1A-211ENST00000538363 A8MU10 97 aa4.73□□□□□ -1.65
TNFRSF1A-211ENST00000538363 BRK1Q8WUW1 75 aa4.7□□□□□ -1.66
TNFRSF1A-211ENST00000538363 CDC42SE1Q9NRR8 79 aa4.69□□□□□ -1.66
TNFRSF1A-211ENST00000538363 CAMK2N1Q7Z7J9 78 aa4.67□□□□□ -1.66
TNFRSF1A-211ENST00000538363 A6NN06 94 aa4.65□□□□□ -1.67
TNFRSF1A-211ENST00000538363 KRTAP19-8Q3LI54 63 aa4.64□□□□□ -1.67
TNFRSF1A-211ENST00000538363 SVIPQ8NHG7 77 aa4.64□□□□□ -1.67
TNFRSF1A-211ENST00000538363 KRTAP12-1P59990 96 aa4.61□□□□□ -1.67
TNFRSF1A-211ENST00000538363 USH2AO75445 5202 aa4.6□□□□□ -1.67
TNFRSF1A-211ENST00000538363 KRTAP12-2P59991 146 aa4.59□□□□□ -1.67
TNFRSF1A-211ENST00000538363 MT1BP07438 61 aa4.57□□□□□ -1.68
TNFRSF1A-211ENST00000538363 PRO2289Q9P1D8 64 aa4.55□□□□□ -1.68
TNFRSF1A-211ENST00000538363 LCE1AQ5T7P2 110 aa4.53□□□□□ -1.68
TNFRSF1A-211ENST00000538363 SSPOA2VEC9 5147 aa4.52□□□□□ -1.69
TNFRSF1A-211ENST00000538363 PRO0628Q9UI54 55 aa4.46□□□□□ -1.7
TNFRSF1A-211ENST00000538363 PMAIP1Q13794 54 aa4.45□□□□□ -1.7
TNFRSF1A-211ENST00000538363 FCGBPQ9Y6R7 5405 aaPredicted RBP4.45□□□□□ -1.7
TNFRSF1A-211ENST00000538363 KRTAP19-6Q3LI70 58 aa4.43□□□□□ -1.7
TNFRSF1A-211ENST00000538363 KRTAP10-5P60370 271 aa4.41□□□□□ -1.7
TNFRSF1A-211ENST00000538363 ROMO1P60602 79 aa4.41□□□□□ -1.7
TNFRSF1A-211ENST00000538363 MT1XP80297 61 aa4.39□□□□□ -1.71
TNFRSF1A-211ENST00000538363 TNP1P09430 55 aa4.38□□□□□ -1.71
TNFRSF1A-211ENST00000538363 C10orf95Q9H7T3 257 aa4.36□□□□□ -1.71
TNFRSF1A-211ENST00000538363 MACF1Q9UPN3 7388 aaKnown RBP4.36□□□□□ -1.71
TNFRSF1A-211ENST00000538363 KRTAP25-1Q3LHN0 102 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms