RNA–Protein interactions for RNA: ENST00000533728.1

CHKA-207, Transcript of choline kinase alpha, humanhuman

TSL 2

Gene CHKA, Length 662 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-207ENST00000533728 C20orf166-AS1Q96NR2 134 aa5.33□□□□□ -1.56
CHKA-207ENST00000533728 LINC01558Q9Y6Z2 57 aa5.33□□□□□ -1.56
CHKA-207ENST00000533728 A8MUU9 505 aa5.32□□□□□ -1.56
CHKA-207ENST00000533728 KRTAP10-8P60410 259 aa5.31□□□□□ -1.56
CHKA-207ENST00000533728 C7orf65Q6ZTY9 151 aa5.3□□□□□ -1.56
CHKA-207ENST00000533728 A8MUN3 132 aa5.28□□□□□ -1.56
CHKA-207ENST00000533728 Q5VV11 94 aa5.28□□□□□ -1.56
CHKA-207ENST00000533728 Q75L30 129 aa5.28□□□□□ -1.56
CHKA-207ENST00000533728 IGKV2D-30A0A075B6S6 120 aa5.27□□□□□ -1.57
CHKA-207ENST00000533728 PSPHP1O15172 72 aa5.27□□□□□ -1.57
CHKA-207ENST00000533728 BRK1Q8WUW1 75 aa5.26□□□□□ -1.57
CHKA-207ENST00000533728 RETNLBQ9BQ08 111 aa5.26□□□□□ -1.57
CHKA-207ENST00000533728 PRR15LQ9BU68 103 aa5.26□□□□□ -1.57
CHKA-207ENST00000533728 CHKB-CPT1BH3BT56 60 aa5.24□□□□□ -1.57
CHKA-207ENST00000533728 NEBP20929 6669 aa5.2□□□□□ -1.58
CHKA-207ENST00000533728 C9orf92A6NGG3 77 aa5.19□□□□□ -1.58
CHKA-207ENST00000533728 MACF1Q9UPN3 7388 aaKnown RBP5.18□□□□□ -1.58
CHKA-207ENST00000533728 FCGBPQ9Y6R7 5405 aaPredicted RBP5.17□□□□□ -1.58
CHKA-207ENST00000533728 SPTSSBQ8NFR3 76 aa5.16□□□□□ -1.58
CHKA-207ENST00000533728 CDC42SE1Q9NRR8 79 aa5.16□□□□□ -1.58
CHKA-207ENST00000533728 A6NED7 52 aa5.15□□□□□ -1.59
CHKA-207ENST00000533728 USH2AO75445 5202 aa5.15□□□□□ -1.59
CHKA-207ENST00000533728 SPINK7P58062 85 aa5.13□□□□□ -1.59
CHKA-207ENST00000533728 A0A1B0GU69 56 aa5.12□□□□□ -1.59
CHKA-207ENST00000533728 RPL37P61927 97 aaKnown RBP5.12□□□□□ -1.59
CHKA-207ENST00000533728 ATP11AUNQ6ZP68 121 aa5.12□□□□□ -1.59
CHKA-207ENST00000533728 COX6B2Q6YFQ2 88 aa5.1□□□□□ -1.59
CHKA-207ENST00000533728 LCA10Q71F78 164 aa5.1□□□□□ -1.59
CHKA-207ENST00000533728 XP32Q5T750 250 aa5.06□□□□□ -1.6
CHKA-207ENST00000533728 KRTAP3-1Q9BYR8 98 aa5.06□□□□□ -1.6
CHKA-207ENST00000533728 SPATA8Q6RVD6 105 aa5.05□□□□□ -1.6
CHKA-207ENST00000533728 MUC17Q685J3 4493 aa5.05□□□□□ -1.6
CHKA-207ENST00000533728 UQCR11O14957 56 aa5.04□□□□□ -1.6
CHKA-207ENST00000533728 SEC61GP60059 68 aa5.04□□□□□ -1.6
CHKA-207ENST00000533728 TPRXLQ17RH7 258 aa5.03□□□□□ -1.6
CHKA-207ENST00000533728 KRTAP20-1Q3LI63 56 aa5.03□□□□□ -1.6
CHKA-207ENST00000533728 A8MU10 97 aa5.01□□□□□ -1.61
CHKA-207ENST00000533728 PMAIP1Q13794 54 aa5.01□□□□□ -1.61
CHKA-207ENST00000533728 MIR22HGQ0VDD5 57 aa4.98□□□□□ -1.61
CHKA-207ENST00000533728 A6NN06 94 aa4.97□□□□□ -1.61
CHKA-207ENST00000533728 GPR98Q8WXG9 6306 aa4.95□□□□□ -1.62
CHKA-207ENST00000533728 KRTAP4-8Q9BYQ9 185 aa4.94□□□□□ -1.62
CHKA-207ENST00000533728 KTN1-AS1Q86SY8 53 aa4.92□□□□□ -1.62
CHKA-207ENST00000533728 KRTAP6-3Q3LI67 103 aa4.9□□□□□ -1.63
CHKA-207ENST00000533728 A0A1B0GU33 70 aa4.89□□□□□ -1.63
CHKA-207ENST00000533728 H1FX-AS1Q4G0G2 97 aa4.89□□□□□ -1.63
CHKA-207ENST00000533728 S4R3F8 94 aa4.89□□□□□ -1.63
CHKA-207ENST00000533728 MUC12Q9UKN1 5478 aa4.86□□□□□ -1.63
CHKA-207ENST00000533728 RBM12B-AS1Q9P1G2 102 aa4.86□□□□□ -1.63
CHKA-207ENST00000533728 SEC61BP60468 96 aaKnown RBP4.84□□□□□ -1.63
CHKA-207ENST00000533728 H0YAA0 97 aa4.83□□□□□ -1.64
CHKA-207ENST00000533728 KRTAP10-6P60371 365 aaPredicted RBP4.82□□□□□ -1.64
CHKA-207ENST00000533728 KRTAP19-1Q8IUB9 90 aa4.8□□□□□ -1.64
CHKA-207ENST00000533728 KRTAP4-12Q9BQ66 201 aa4.78□□□□□ -1.64
CHKA-207ENST00000533728 MT1HP80294 61 aa4.77□□□□□ -1.65
CHKA-207ENST00000533728 CSAG1Q6PB30 78 aa4.77□□□□□ -1.65
CHKA-207ENST00000533728 KMT2DO14686 5537 aa4.75□□□□□ -1.65
CHKA-207ENST00000533728 K7ERS5 55 aa4.75□□□□□ -1.65
CHKA-207ENST00000533728 KRTAP4-1Q9BYQ7 146 aa4.7□□□□□ -1.66
CHKA-207ENST00000533728 M0QZ58 72 aa4.68□□□□□ -1.66
CHKA-207ENST00000533728 ADM2Q7Z4H4 148 aa4.68□□□□□ -1.66
CHKA-207ENST00000533728 P0C880 135 aa4.67□□□□□ -1.66
CHKA-207ENST00000533728 KRTAP13-4Q3LI77 160 aa4.65□□□□□ -1.67
CHKA-207ENST00000533728 M0R2T5 61 aa4.64□□□□□ -1.67
CHKA-207ENST00000533728 LCE3BQ5TA77 95 aa4.64□□□□□ -1.67
CHKA-207ENST00000533728 KRTAP9-9Q9BYP9 154 aa4.64□□□□□ -1.67
CHKA-207ENST00000533728 KRTAP9-4Q9BYQ2 154 aa4.64□□□□□ -1.67
CHKA-207ENST00000533728 KRTAP19-2Q3LHN2 52 aa4.63□□□□□ -1.67
CHKA-207ENST00000533728 KRTAP2-3P0C7H8 128 aa4.62□□□□□ -1.67
CHKA-207ENST00000533728 KRTAP2-4Q9BYR9 128 aa4.62□□□□□ -1.67
CHKA-207ENST00000533728 FLGP20930 4061 aaPredicted RBP4.6□□□□□ -1.67
CHKA-207ENST00000533728 MDN1Q9NU22 5596 aa4.6□□□□□ -1.67
CHKA-207ENST00000533728 PRAC1Q96KF2 57 aa4.6□□□□□ -1.67
CHKA-207ENST00000533728 ROMO1P60602 79 aa4.57□□□□□ -1.68
CHKA-207ENST00000533728 A0A0D9SG42 100 aa4.55□□□□□ -1.68
CHKA-207ENST00000533728 KRTAP12-1P59990 96 aa4.53□□□□□ -1.68
CHKA-207ENST00000533728 KRTAP4-8A0A0G2JLE6 195 aa4.52□□□□□ -1.69
CHKA-207ENST00000533728 KRTAP25-1Q3LHN0 102 aa4.52□□□□□ -1.69
CHKA-207ENST00000533728 KRTAP12-2P59991 146 aa4.5□□□□□ -1.69
CHKA-207ENST00000533728 LINC01554Q52M75 96 aa4.5□□□□□ -1.69
CHKA-207ENST00000533728 R4GN34 69 aa4.5□□□□□ -1.69
CHKA-207ENST00000533728 CRIPTQ9P021 101 aa4.47□□□□□ -1.69
CHKA-207ENST00000533728 KRTAP19-6Q3LI70 58 aa4.45□□□□□ -1.7
CHKA-207ENST00000533728 SPINT4Q6UDR6 99 aa4.45□□□□□ -1.7
CHKA-207ENST00000533728 KRTAP2-2Q9BYT5 123 aa4.4□□□□□ -1.71
CHKA-207ENST00000533728 KRTAP2-1Q9BYU5 128 aa4.4□□□□□ -1.71
CHKA-207ENST00000533728 LCE1DQ5T752 114 aa4.37□□□□□ -1.71
CHKA-207ENST00000533728 LCE4AQ5TA78 99 aa4.37□□□□□ -1.71
CHKA-207ENST00000533728 H3BS24 57 aa4.35□□□□□ -1.71
CHKA-207ENST00000533728 KRTAP4-7Q9BYR0 210 aa4.35□□□□□ -1.71
CHKA-207ENST00000533728 KRTAP9-8Q9BYQ0 159 aa4.34□□□□□ -1.71
CHKA-207ENST00000533728 KRTAP4-9Q9BYQ8 210 aa4.27□□□□□ -1.73
CHKA-207ENST00000533728 C10orf95Q9H7T3 257 aa4.27□□□□□ -1.73
CHKA-207ENST00000533728 SPRR2GQ9BYE4 73 aa4.26□□□□□ -1.73
CHKA-207ENST00000533728 KRTAP5-9P26371 169 aa4.25□□□□□ -1.73
CHKA-207ENST00000533728 KRTAP19-4Q3LI73 84 aa4.24□□□□□ -1.73
CHKA-207ENST00000533728 KRTAP9-3Q9BYQ3 159 aa4.24□□□□□ -1.73
CHKA-207ENST00000533728 MT2AP02795 61 aa4.23□□□□□ -1.73
CHKA-207ENST00000533728 CAMK2N1Q7Z7J9 78 aa4.23□□□□□ -1.73
CHKA-207ENST00000533728 PP632Q6XCG6 107 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms