RNA–Protein interactions for RNA: ENST00000526131.1

AP004247.2-201, humanhuman

TSL 1 (best) BASIC

Gene AP004247.2, Length 1,890 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP004247.2-201ENST00000526131 KRTAP4-9Q9BYQ8 210 aa5.56□□□□□ -1.52
AP004247.2-201ENST00000526131 MT1HP80294 61 aa5.55□□□□□ -1.52
AP004247.2-201ENST00000526131 C5orf47Q569G3 176 aa5.55□□□□□ -1.52
AP004247.2-201ENST00000526131 FLGP20930 4061 aaPredicted RBP5.53□□□□□ -1.52
AP004247.2-201ENST00000526131 TRAV7A0A075B6U4 112 aa5.53□□□□□ -1.52
AP004247.2-201ENST00000526131 KLKP1Q107X0 134 aa5.51□□□□□ -1.53
AP004247.2-201ENST00000526131 SMIM20Q8N5G0 67 aa5.51□□□□□ -1.53
AP004247.2-201ENST00000526131 SNURFQ9Y675 71 aa5.49□□□□□ -1.53
AP004247.2-201ENST00000526131 SERP2Q8N6R1 65 aa5.47□□□□□ -1.53
AP004247.2-201ENST00000526131 KRTAP9-3Q9BYQ3 159 aa5.47□□□□□ -1.53
AP004247.2-201ENST00000526131 H1FX-AS1Q4G0G2 97 aa5.46□□□□□ -1.54
AP004247.2-201ENST00000526131 C20orf197Q8N268 126 aa5.46□□□□□ -1.54
AP004247.2-201ENST00000526131 KRTAP3-1Q9BYR8 98 aa5.46□□□□□ -1.54
AP004247.2-201ENST00000526131 H3BPC8 53 aa5.45□□□□□ -1.54
AP004247.2-201ENST00000526131 LCE5AQ5TCM9 118 aa5.45□□□□□ -1.54
AP004247.2-201ENST00000526131 PCP4P48539 62 aa5.43□□□□□ -1.54
AP004247.2-201ENST00000526131 ANAPC13Q9BS18 74 aa5.43□□□□□ -1.54
AP004247.2-201ENST00000526131 COX7CP15954 63 aa5.39□□□□□ -1.55
AP004247.2-201ENST00000526131 KRTAP10-6P60371 365 aaPredicted RBP5.39□□□□□ -1.55
AP004247.2-201ENST00000526131 S4R3F8 94 aa5.39□□□□□ -1.55
AP004247.2-201ENST00000526131 KRTAP4-11Q9BYQ6 195 aa5.39□□□□□ -1.55
AP004247.2-201ENST00000526131 KRTAP4-2Q9BYR5 136 aa5.38□□□□□ -1.55
AP004247.2-201ENST00000526131 LCA10Q71F78 164 aa5.37□□□□□ -1.55
AP004247.2-201ENST00000526131 CYSTM1Q9H1C7 97 aa5.33□□□□□ -1.56
AP004247.2-201ENST00000526131 A8MUN3 132 aa5.31□□□□□ -1.56
AP004247.2-201ENST00000526131 CCDC179H3BU77 68 aa5.31□□□□□ -1.56
AP004247.2-201ENST00000526131 DMAC1Q96GE9 116 aa5.3□□□□□ -1.56
AP004247.2-201ENST00000526131 CSAG1Q6PB30 78 aa5.28□□□□□ -1.56
AP004247.2-201ENST00000526131 KRTAP9-8Q9BYQ0 159 aa5.28□□□□□ -1.56
AP004247.2-201ENST00000526131 NDUFC1O43677 76 aa5.27□□□□□ -1.57
AP004247.2-201ENST00000526131 MT2AP02795 61 aa5.25□□□□□ -1.57
AP004247.2-201ENST00000526131 ACYP2P14621 99 aa5.25□□□□□ -1.57
AP004247.2-201ENST00000526131 KRTAP10-10P60014 251 aa5.25□□□□□ -1.57
AP004247.2-201ENST00000526131 H7BZZ5 65 aa5.24□□□□□ -1.57
AP004247.2-201ENST00000526131 MT1FP04733 61 aa5.24□□□□□ -1.57
AP004247.2-201ENST00000526131 CHKB-CPT1BH3BT56 60 aa5.23□□□□□ -1.57
AP004247.2-201ENST00000526131 SPANXA2-OT1Q8N9U9 137 aa5.23□□□□□ -1.57
AP004247.2-201ENST00000526131 KRTAP23-1A1A580 65 aa5.2□□□□□ -1.58
AP004247.2-201ENST00000526131 A0A0A0MQY5 61 aa5.18□□□□□ -1.58
AP004247.2-201ENST00000526131 FSIP2Q5CZC0 6907 aa5.16□□□□□ -1.58
AP004247.2-201ENST00000526131 COA5Q86WW8 74 aa5.15□□□□□ -1.58
AP004247.2-201ENST00000526131 ADM2Q7Z4H4 148 aa5.13□□□□□ -1.59
AP004247.2-201ENST00000526131 SPTSSBQ8NFR3 76 aa5.11□□□□□ -1.59
AP004247.2-201ENST00000526131 P0C880 135 aa5.06□□□□□ -1.6
AP004247.2-201ENST00000526131 TMEM258P61165 79 aa5.06□□□□□ -1.6
AP004247.2-201ENST00000526131 H0YAA0 97 aa5.04□□□□□ -1.6
AP004247.2-201ENST00000526131 ATP5EP56381 51 aaPredicted RBP5.03□□□□□ -1.6
AP004247.2-201ENST00000526131 USH2AO75445 5202 aa5.02□□□□□ -1.61
AP004247.2-201ENST00000526131 R4GN34 69 aa4.97□□□□□ -1.61
AP004247.2-201ENST00000526131 M0QZ58 72 aa4.96□□□□□ -1.62
AP004247.2-201ENST00000526131 SEC61GP60059 68 aa4.94□□□□□ -1.62
AP004247.2-201ENST00000526131 LINC01554Q52M75 96 aa4.94□□□□□ -1.62
AP004247.2-201ENST00000526131 SPRR2GQ9BYE4 73 aa4.94□□□□□ -1.62
AP004247.2-201ENST00000526131 CRIPTQ9P021 101 aa4.94□□□□□ -1.62
AP004247.2-201ENST00000526131 KRTAP15-1Q3LI76 137 aa4.92□□□□□ -1.62
AP004247.2-201ENST00000526131 SERP1Q9Y6X1 66 aa4.92□□□□□ -1.62
AP004247.2-201ENST00000526131 SSPOA2VEC9 5147 aa4.91□□□□□ -1.62
AP004247.2-201ENST00000526131 CRCT1Q9UGL9 99 aa4.9□□□□□ -1.62
AP004247.2-201ENST00000526131 A0A1B0GU69 56 aa4.9□□□□□ -1.63
AP004247.2-201ENST00000526131 Q5VV11 94 aa4.89□□□□□ -1.63
AP004247.2-201ENST00000526131 MT1BP07438 61 aa4.86□□□□□ -1.63
AP004247.2-201ENST00000526131 KRTAP5-3Q6L8H2 238 aa4.86□□□□□ -1.63
AP004247.2-201ENST00000526131 KRTAP13-4Q3LI77 160 aa4.85□□□□□ -1.63
AP004247.2-201ENST00000526131 KRTAP19-8Q3LI54 63 aa4.84□□□□□ -1.63
AP004247.2-201ENST00000526131 SPATA8Q6RVD6 105 aa4.83□□□□□ -1.64
AP004247.2-201ENST00000526131 A0A1B0GU33 70 aa4.82□□□□□ -1.64
AP004247.2-201ENST00000526131 A0A0D9SG42 100 aa4.81□□□□□ -1.64
AP004247.2-201ENST00000526131 PRR15LQ9BU68 103 aa4.79□□□□□ -1.64
AP004247.2-201ENST00000526131 LINC01558Q9Y6Z2 57 aa4.79□□□□□ -1.64
AP004247.2-201ENST00000526131 PLAC4Q8WY50 150 aa4.77□□□□□ -1.65
AP004247.2-201ENST00000526131 FCGBPQ9Y6R7 5405 aaPredicted RBP4.75□□□□□ -1.65
AP004247.2-201ENST00000526131 PSPHP1O15172 72 aa4.75□□□□□ -1.65
AP004247.2-201ENST00000526131 KRTAP19-6Q3LI70 58 aa4.74□□□□□ -1.65
AP004247.2-201ENST00000526131 A6NN06 94 aa4.73□□□□□ -1.65
AP004247.2-201ENST00000526131 SMIM26A0A096LP01 95 aa4.72□□□□□ -1.65
AP004247.2-201ENST00000526131 A8MU10 97 aa4.71□□□□□ -1.66
AP004247.2-201ENST00000526131 SPINT4Q6UDR6 99 aa4.69□□□□□ -1.66
AP004247.2-201ENST00000526131 V9GYY9 64 aa4.69□□□□□ -1.66
AP004247.2-201ENST00000526131 RPS28P62857 69 aaKnown RBP4.69□□□□□ -1.66
AP004247.2-201ENST00000526131 Q1T7F1 81 aa4.69□□□□□ -1.66
AP004247.2-201ENST00000526131 KRTAP10-5P60370 271 aa4.66□□□□□ -1.66
AP004247.2-201ENST00000526131 UQCR11O14957 56 aa4.65□□□□□ -1.66
AP004247.2-201ENST00000526131 MT1XP80297 61 aa4.64□□□□□ -1.67
AP004247.2-201ENST00000526131 CAMK2N1Q7Z7J9 78 aa4.64□□□□□ -1.67
AP004247.2-201ENST00000526131 KRTAP12-2P59991 146 aa4.62□□□□□ -1.67
AP004247.2-201ENST00000526131 PRO2289Q9P1D8 64 aa4.62□□□□□ -1.67
AP004247.2-201ENST00000526131 KRTAP12-1P59990 96 aa4.61□□□□□ -1.67
AP004247.2-201ENST00000526131 MIR22HGQ0VDD5 57 aa4.6□□□□□ -1.67
AP004247.2-201ENST00000526131 MACF1Q9UPN3 7388 aaKnown RBP4.6□□□□□ -1.67
AP004247.2-201ENST00000526131 A6NED7 52 aa4.58□□□□□ -1.68
AP004247.2-201ENST00000526131 SYNE2Q8WXH0 6885 aaKnown RBP4.57□□□□□ -1.68
AP004247.2-201ENST00000526131 KMT2DO14686 5537 aa4.52□□□□□ -1.69
AP004247.2-201ENST00000526131 KRTAP10-7P60409 375 aaPredicted RBP4.47□□□□□ -1.69
AP004247.2-201ENST00000526131 K7ERS5 55 aa4.43□□□□□ -1.7
AP004247.2-201ENST00000526131 C10orf95Q9H7T3 257 aa4.39□□□□□ -1.71
AP004247.2-201ENST00000526131 CDC42SE1Q9NRR8 79 aa4.38□□□□□ -1.71
AP004247.2-201ENST00000526131 KRTAP10-12P60413 245 aa4.36□□□□□ -1.71
AP004247.2-201ENST00000526131 KRTAP8-1Q8IUC2 63 aa4.35□□□□□ -1.71
AP004247.2-201ENST00000526131 BRK1Q8WUW1 75 aa4.32□□□□□ -1.72
AP004247.2-201ENST00000526131 TNP1P09430 55 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms