RNA–Protein interactions for RNA: ENST00000522792.1

CTNNA1-236, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 2,044 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-236ENST00000522792 HERC1Q15751 4861 aa8.12□□□□□ -1.11
CTNNA1-236ENST00000522792 PSPHP1O15172 72 aa8.03□□□□□ -1.12
CTNNA1-236ENST00000522792 HMCN2Q8NDA2 5059 aa8.02□□□□□ -1.13
CTNNA1-236ENST00000522792 SEC61BP60468 96 aaKnown RBP8□□□□□ -1.13
CTNNA1-236ENST00000522792 DMAC1Q96GE9 116 aa7.98□□□□□ -1.13
CTNNA1-236ENST00000522792 A8MUN3 132 aa7.98□□□□□ -1.13
CTNNA1-236ENST00000522792 KTN1-AS1Q86SY8 53 aa7.97□□□□□ -1.13
CTNNA1-236ENST00000522792 Q5VV11 94 aa7.96□□□□□ -1.14
CTNNA1-236ENST00000522792 COA5Q86WW8 74 aa7.95□□□□□ -1.14
CTNNA1-236ENST00000522792 ACYP2P14621 99 aa7.93□□□□□ -1.14
CTNNA1-236ENST00000522792 KRTAP3-1Q9BYR8 98 aa7.92□□□□□ -1.14
CTNNA1-236ENST00000522792 COX6B2Q6YFQ2 88 aa7.91□□□□□ -1.14
CTNNA1-236ENST00000522792 MUC17Q685J3 4493 aa7.9□□□□□ -1.14
CTNNA1-236ENST00000522792 KRTAP4-1Q9BYQ7 146 aa7.9□□□□□ -1.15
CTNNA1-236ENST00000522792 RBM12B-AS1Q9P1G2 102 aa7.89□□□□□ -1.15
CTNNA1-236ENST00000522792 CHKB-CPT1BH3BT56 60 aa7.88□□□□□ -1.15
CTNNA1-236ENST00000522792 KRTAP4-8Q9BYQ9 185 aa7.88□□□□□ -1.15
CTNNA1-236ENST00000522792 A8MU10 97 aa7.88□□□□□ -1.15
CTNNA1-236ENST00000522792 PRR15LQ9BU68 103 aa7.85□□□□□ -1.15
CTNNA1-236ENST00000522792 SPTSSBQ8NFR3 76 aa7.81□□□□□ -1.16
CTNNA1-236ENST00000522792 A6NN06 94 aa7.79□□□□□ -1.16
CTNNA1-236ENST00000522792 A6NED7 52 aa7.78□□□□□ -1.16
CTNNA1-236ENST00000522792 LCA10Q71F78 164 aa7.78□□□□□ -1.16
CTNNA1-236ENST00000522792 CDC42SE1Q9NRR8 79 aa7.77□□□□□ -1.17
CTNNA1-236ENST00000522792 LINC01558Q9Y6Z2 57 aa7.74□□□□□ -1.17
CTNNA1-236ENST00000522792 KRTAP9-2Q9BYQ4 174 aa7.74□□□□□ -1.17
CTNNA1-236ENST00000522792 H1FX-AS1Q4G0G2 97 aa7.72□□□□□ -1.17
CTNNA1-236ENST00000522792 KRTAP4-12Q9BQ66 201 aa7.71□□□□□ -1.17
CTNNA1-236ENST00000522792 MUC2Q02817 5179 aa7.71□□□□□ -1.18
CTNNA1-236ENST00000522792 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.7□□□□□ -1.18
CTNNA1-236ENST00000522792 KRTAP19-1Q8IUB9 90 aa7.7□□□□□ -1.18
CTNNA1-236ENST00000522792 UBR4Q5T4S7 5183 aa7.69□□□□□ -1.18
CTNNA1-236ENST00000522792 S4R3F8 94 aa7.68□□□□□ -1.18
CTNNA1-236ENST00000522792 KRTAP9-6A0A140TA67 174 aa7.68□□□□□ -1.18
CTNNA1-236ENST00000522792 KRTAP19-2Q3LHN2 52 aa7.64□□□□□ -1.19
CTNNA1-236ENST00000522792 RNF213Q63HN8 5207 aa7.63□□□□□ -1.19
CTNNA1-236ENST00000522792 LCE3BQ5TA77 95 aa7.54□□□□□ -1.2
CTNNA1-236ENST00000522792 A0A1B0GU69 56 aa7.51□□□□□ -1.21
CTNNA1-236ENST00000522792 KRTAP19-4Q3LI73 84 aa7.49□□□□□ -1.21
CTNNA1-236ENST00000522792 CSAG1Q6PB30 78 aa7.49□□□□□ -1.21
CTNNA1-236ENST00000522792 LINC01554Q52M75 96 aa7.45□□□□□ -1.22
CTNNA1-236ENST00000522792 FLGP20930 4061 aaPredicted RBP7.42□□□□□ -1.22
CTNNA1-236ENST00000522792 FAT4Q6V0I7 4981 aa7.39□□□□□ -1.23
CTNNA1-236ENST00000522792 PRAC1Q96KF2 57 aa7.39□□□□□ -1.23
CTNNA1-236ENST00000522792 SPATA8Q6RVD6 105 aa7.36□□□□□ -1.23
CTNNA1-236ENST00000522792 ADM2Q7Z4H4 148 aa7.36□□□□□ -1.23
CTNNA1-236ENST00000522792 KRTAP9-9Q9BYP9 154 aa7.35□□□□□ -1.23
CTNNA1-236ENST00000522792 KRTAP9-4Q9BYQ2 154 aa7.35□□□□□ -1.23
CTNNA1-236ENST00000522792 KRTAP10-6P60371 365 aaPredicted RBP7.34□□□□□ -1.23
CTNNA1-236ENST00000522792 MT1HP80294 61 aa7.34□□□□□ -1.24
CTNNA1-236ENST00000522792 P0C880 135 aa7.32□□□□□ -1.24
CTNNA1-236ENST00000522792 M0R2T5 61 aa7.3□□□□□ -1.24
CTNNA1-236ENST00000522792 A0A1B0GU33 70 aa7.28□□□□□ -1.24
CTNNA1-236ENST00000522792 H0YAA0 97 aa7.28□□□□□ -1.24
CTNNA1-236ENST00000522792 UQCR11O14957 56 aa7.28□□□□□ -1.24
CTNNA1-236ENST00000522792 MIR22HGQ0VDD5 57 aa7.28□□□□□ -1.24
CTNNA1-236ENST00000522792 LCE4AQ5TA78 99 aa7.25□□□□□ -1.25
CTNNA1-236ENST00000522792 KRTAP13-4Q3LI77 160 aa7.17□□□□□ -1.26
CTNNA1-236ENST00000522792 KRTAP9-7A8MTY7 169 aa7.16□□□□□ -1.26
CTNNA1-236ENST00000522792 KRTAP4-8A0A0G2JLE6 195 aa7.15□□□□□ -1.26
CTNNA1-236ENST00000522792 M0QZ58 72 aa7.08□□□□□ -1.28
CTNNA1-236ENST00000522792 R4GN34 69 aa7.08□□□□□ -1.28
CTNNA1-236ENST00000522792 A0A0D9SG42 100 aa7.06□□□□□ -1.28
CTNNA1-236ENST00000522792 LCE1DQ5T752 114 aa7.06□□□□□ -1.28
CTNNA1-236ENST00000522792 KRTAP9-8Q9BYQ0 159 aa7.05□□□□□ -1.28
CTNNA1-236ENST00000522792 MT2AP02795 61 aa7.05□□□□□ -1.28
CTNNA1-236ENST00000522792 MT1FP04733 61 aa7.01□□□□□ -1.29
CTNNA1-236ENST00000522792 KRTAP10-10P60014 251 aa7□□□□□ -1.29
CTNNA1-236ENST00000522792 ROMO1P60602 79 aa6.96□□□□□ -1.29
CTNNA1-236ENST00000522792 CRIPTQ9P021 101 aa6.96□□□□□ -1.29
CTNNA1-236ENST00000522792 KRTAP25-1Q3LHN0 102 aa6.96□□□□□ -1.3
CTNNA1-236ENST00000522792 SPINT4Q6UDR6 99 aa6.88□□□□□ -1.31
CTNNA1-236ENST00000522792 KRTAP12-2P59991 146 aa6.88□□□□□ -1.31
CTNNA1-236ENST00000522792 KRTAP9-3Q9BYQ3 159 aa6.88□□□□□ -1.31
CTNNA1-236ENST00000522792 KRTAP4-7Q9BYR0 210 aa6.88□□□□□ -1.31
CTNNA1-236ENST00000522792 KRTAP12-1P59990 96 aa6.87□□□□□ -1.31
CTNNA1-236ENST00000522792 SPRR2GQ9BYE4 73 aa6.86□□□□□ -1.31
CTNNA1-236ENST00000522792 K7ERS5 55 aa6.84□□□□□ -1.31
CTNNA1-236ENST00000522792 KRTAP23-1A1A580 65 aa6.82□□□□□ -1.32
CTNNA1-236ENST00000522792 KRTAP4-9Q9BYQ8 210 aa6.81□□□□□ -1.32
CTNNA1-236ENST00000522792 LCE5AQ5TCM9 118 aa6.77□□□□□ -1.32
CTNNA1-236ENST00000522792 KRTAP19-8Q3LI54 63 aa6.67□□□□□ -1.34
CTNNA1-236ENST00000522792 PLAC4Q8WY50 150 aa6.65□□□□□ -1.35
CTNNA1-236ENST00000522792 CAMK2N1Q7Z7J9 78 aa6.64□□□□□ -1.35
CTNNA1-236ENST00000522792 MT1BP07438 61 aa6.62□□□□□ -1.35
CTNNA1-236ENST00000522792 KRTAP4-11Q9BYQ6 195 aa6.62□□□□□ -1.35
CTNNA1-236ENST00000522792 KRTAP4-2Q9BYR5 136 aa6.57□□□□□ -1.36
CTNNA1-236ENST00000522792 C10orf95Q9H7T3 257 aa6.51□□□□□ -1.37
CTNNA1-236ENST00000522792 USH2AO75445 5202 aa6.47□□□□□ -1.37
CTNNA1-236ENST00000522792 NDUFAF8A1L188 74 aa6.45□□□□□ -1.38
CTNNA1-236ENST00000522792 KRTAP15-1Q3LI76 137 aa6.45□□□□□ -1.38
CTNNA1-236ENST00000522792 MT1XP80297 61 aa6.41□□□□□ -1.38
CTNNA1-236ENST00000522792 KRTAP10-5P60370 271 aa6.4□□□□□ -1.39
CTNNA1-236ENST00000522792 PRO2289Q9P1D8 64 aa6.3□□□□□ -1.4
CTNNA1-236ENST00000522792 A0A0A0MQY5 61 aa6.29□□□□□ -1.4
CTNNA1-236ENST00000522792 TNP1P09430 55 aa6.29□□□□□ -1.4
CTNNA1-236ENST00000522792 FSIP2Q5CZC0 6907 aa6.27□□□□□ -1.41
CTNNA1-236ENST00000522792 SSPOA2VEC9 5147 aa6.25□□□□□ -1.41
CTNNA1-236ENST00000522792 KRTAP19-6Q3LI70 58 aa6.18□□□□□ -1.42
CTNNA1-236ENST00000522792 KRTAP10-7P60409 375 aaPredicted RBP6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 100.8 ms