RNA–Protein interactions for RNA: ENST00000520687.1

SPARC-202, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 2

Gene SPARC, Length 1,598 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-202ENST00000520687 LCA10Q71F78 164 aa5.5□□□□□ -1.53
SPARC-202ENST00000520687 MUC2Q02817 5179 aa5.5□□□□□ -1.53
SPARC-202ENST00000520687 A8MUU9 505 aa5.5□□□□□ -1.53
SPARC-202ENST00000520687 C20orf166-AS1Q96NR2 134 aa5.5□□□□□ -1.53
SPARC-202ENST00000520687 CDC42SE1Q9NRR8 79 aa5.5□□□□□ -1.53
SPARC-202ENST00000520687 KRTAP10-8P60410 259 aa5.49□□□□□ -1.53
SPARC-202ENST00000520687 A6NED7 52 aa5.48□□□□□ -1.53
SPARC-202ENST00000520687 C7orf65Q6ZTY9 151 aa5.48□□□□□ -1.53
SPARC-202ENST00000520687 FAT4Q6V0I7 4981 aa5.48□□□□□ -1.53
SPARC-202ENST00000520687 PKHD1L1Q86WI1 4243 aa5.48□□□□□ -1.53
SPARC-202ENST00000520687 SEC61GP60059 68 aa5.47□□□□□ -1.53
SPARC-202ENST00000520687 LRP1Q07954 4544 aaKnown RBP5.47□□□□□ -1.53
SPARC-202ENST00000520687 RETNLBQ9BQ08 111 aa5.46□□□□□ -1.53
SPARC-202ENST00000520687 IGKV2D-30A0A075B6S6 120 aa5.46□□□□□ -1.54
SPARC-202ENST00000520687 A6NN06 94 aa5.45□□□□□ -1.54
SPARC-202ENST00000520687 LCE3BQ5TA77 95 aa5.45□□□□□ -1.54
SPARC-202ENST00000520687 CRCT1Q9UGL9 99 aa5.44□□□□□ -1.54
SPARC-202ENST00000520687 KTN1-AS1Q86SY8 53 aa5.43□□□□□ -1.54
SPARC-202ENST00000520687 SPINK7P58062 85 aa5.41□□□□□ -1.54
SPARC-202ENST00000520687 SPTSSBQ8NFR3 76 aa5.41□□□□□ -1.54
SPARC-202ENST00000520687 C9orf92A6NGG3 77 aa5.4□□□□□ -1.55
SPARC-202ENST00000520687 FAT3Q8TDW7 4589 aa5.38□□□□□ -1.55
SPARC-202ENST00000520687 MT1HL1P0DM35 61 aa5.37□□□□□ -1.55
SPARC-202ENST00000520687 KRTAP4-8A0A0G2JLE6 195 aa5.35□□□□□ -1.55
SPARC-202ENST00000520687 KRTAP9-9Q9BYP9 154 aa5.33□□□□□ -1.56
SPARC-202ENST00000520687 KRTAP9-4Q9BYQ2 154 aa5.33□□□□□ -1.56
SPARC-202ENST00000520687 KRTAP4-12Q9BQ66 201 aa5.33□□□□□ -1.56
SPARC-202ENST00000520687 RPL37P61927 97 aaKnown RBP5.3□□□□□ -1.56
SPARC-202ENST00000520687 RBM12B-AS1Q9P1G2 102 aa5.3□□□□□ -1.56
SPARC-202ENST00000520687 FSIP2Q5CZC0 6907 aa5.3□□□□□ -1.56
SPARC-202ENST00000520687 A0A1B0GU69 56 aa5.29□□□□□ -1.56
SPARC-202ENST00000520687 TNXBP22105 4242 aa5.28□□□□□ -1.56
SPARC-202ENST00000520687 SPATA8Q6RVD6 105 aa5.28□□□□□ -1.56
SPARC-202ENST00000520687 COX6B2Q6YFQ2 88 aa5.26□□□□□ -1.57
SPARC-202ENST00000520687 KRTAP9-7A8MTY7 169 aa5.25□□□□□ -1.57
SPARC-202ENST00000520687 TPRXLQ17RH7 258 aa5.22□□□□□ -1.57
SPARC-202ENST00000520687 UQCR11O14957 56 aa5.21□□□□□ -1.58
SPARC-202ENST00000520687 MIR22HGQ0VDD5 57 aa5.21□□□□□ -1.58
SPARC-202ENST00000520687 KRTAP3-1Q9BYR8 98 aa5.21□□□□□ -1.58
SPARC-202ENST00000520687 KRTAP4-7Q9BYR0 210 aa5.2□□□□□ -1.58
SPARC-202ENST00000520687 PRAC1Q96KF2 57 aa5.12□□□□□ -1.59
SPARC-202ENST00000520687 LPAP08519 4548 aa5.11□□□□□ -1.59
SPARC-202ENST00000520687 H3BS24 57 aa5.1□□□□□ -1.59
SPARC-202ENST00000520687 LCE1DQ5T752 114 aa5.1□□□□□ -1.59
SPARC-202ENST00000520687 ADM2Q7Z4H4 148 aa5.1□□□□□ -1.59
SPARC-202ENST00000520687 KRTAP19-1Q8IUB9 90 aa5.1□□□□□ -1.59
SPARC-202ENST00000520687 H1FX-AS1Q4G0G2 97 aa5.08□□□□□ -1.6
SPARC-202ENST00000520687 A0A1B0GU33 70 aa5.07□□□□□ -1.6
SPARC-202ENST00000520687 S4R3F8 94 aa5.07□□□□□ -1.6
SPARC-202ENST00000520687 SEC61BP60468 96 aaKnown RBP5.06□□□□□ -1.6
SPARC-202ENST00000520687 LINC01554Q52M75 96 aa5.03□□□□□ -1.6
SPARC-202ENST00000520687 H0YAA0 97 aa5.01□□□□□ -1.61
SPARC-202ENST00000520687 KRTAP4-9Q9BYQ8 210 aa4.99□□□□□ -1.61
SPARC-202ENST00000520687 CSAG1Q6PB30 78 aa4.97□□□□□ -1.61
SPARC-202ENST00000520687 KRTAP4-2Q9BYR5 136 aa4.96□□□□□ -1.62
SPARC-202ENST00000520687 K7ERS5 55 aa4.94□□□□□ -1.62
SPARC-202ENST00000520687 KRTAP10-6P60371 365 aaPredicted RBP4.92□□□□□ -1.62
SPARC-202ENST00000520687 KRTAP25-1Q3LHN0 102 aa4.88□□□□□ -1.63
SPARC-202ENST00000520687 M0QZ58 72 aa4.84□□□□□ -1.63
SPARC-202ENST00000520687 P0C880 135 aa4.82□□□□□ -1.64
SPARC-202ENST00000520687 ROMO1P60602 79 aa4.77□□□□□ -1.65
SPARC-202ENST00000520687 KRTAP13-4Q3LI77 160 aa4.77□□□□□ -1.65
SPARC-202ENST00000520687 KRTAP4-1Q9BYQ7 146 aa4.77□□□□□ -1.65
SPARC-202ENST00000520687 MUC17Q685J3 4493 aa4.75□□□□□ -1.65
SPARC-202ENST00000520687 KRTAP4-11Q9BYQ6 195 aa4.75□□□□□ -1.65
SPARC-202ENST00000520687 KRTAP19-2Q3LHN2 52 aa4.74□□□□□ -1.65
SPARC-202ENST00000520687 A0A0D9SG42 100 aa4.73□□□□□ -1.65
SPARC-202ENST00000520687 KRTAP5-3Q6L8H2 238 aa4.71□□□□□ -1.66
SPARC-202ENST00000520687 SSPOA2VEC9 5147 aa4.69□□□□□ -1.66
SPARC-202ENST00000520687 R4GN34 69 aa4.69□□□□□ -1.66
SPARC-202ENST00000520687 KRTAP12-1P59990 96 aa4.66□□□□□ -1.66
SPARC-202ENST00000520687 CRIPTQ9P021 101 aa4.65□□□□□ -1.66
SPARC-202ENST00000520687 KRTAP12-2P59991 146 aa4.63□□□□□ -1.67
SPARC-202ENST00000520687 MT1HP80294 61 aa4.63□□□□□ -1.67
SPARC-202ENST00000520687 SYNE2Q8WXH0 6885 aaKnown RBP4.63□□□□□ -1.67
SPARC-202ENST00000520687 SPINT4Q6UDR6 99 aa4.62□□□□□ -1.67
SPARC-202ENST00000520687 FCGBPQ9Y6R7 5405 aaPredicted RBP4.61□□□□□ -1.67
SPARC-202ENST00000520687 MACF1Q9UPN3 7388 aaKnown RBP4.6□□□□□ -1.67
SPARC-202ENST00000520687 KRTAP9-8Q9BYQ0 159 aa4.6□□□□□ -1.67
SPARC-202ENST00000520687 USH2AO75445 5202 aa4.59□□□□□ -1.67
SPARC-202ENST00000520687 A0A0A0MQY5 61 aa4.56□□□□□ -1.68
SPARC-202ENST00000520687 M0R2T5 61 aa4.56□□□□□ -1.68
SPARC-202ENST00000520687 FLGP20930 4061 aaPredicted RBP4.56□□□□□ -1.68
SPARC-202ENST00000520687 KRTAP20-1Q3LI63 56 aa4.54□□□□□ -1.68
SPARC-202ENST00000520687 KRTAP6-3Q3LI67 103 aa4.54□□□□□ -1.68
SPARC-202ENST00000520687 C10orf95Q9H7T3 257 aa4.53□□□□□ -1.68
SPARC-202ENST00000520687 KRTAP15-1Q3LI76 137 aa4.48□□□□□ -1.69
SPARC-202ENST00000520687 NEBP20929 6669 aa4.42□□□□□ -1.7
SPARC-202ENST00000520687 LCE4AQ5TA78 99 aa4.42□□□□□ -1.7
SPARC-202ENST00000520687 LCE5AQ5TCM9 118 aa4.42□□□□□ -1.7
SPARC-202ENST00000520687 CAMK2N1Q7Z7J9 78 aa4.42□□□□□ -1.7
SPARC-202ENST00000520687 SPRR2GQ9BYE4 73 aa4.4□□□□□ -1.7
SPARC-202ENST00000520687 PP632Q6XCG6 107 aa4.36□□□□□ -1.71
SPARC-202ENST00000520687 PLAC4Q8WY50 150 aa4.35□□□□□ -1.71
SPARC-202ENST00000520687 NDUFAF8A1L188 74 aa4.31□□□□□ -1.72
SPARC-202ENST00000520687 MT2AP02795 61 aa4.31□□□□□ -1.72
SPARC-202ENST00000520687 KRTAP10-10P60014 251 aa4.31□□□□□ -1.72
SPARC-202ENST00000520687 KRTAP23-1A1A580 65 aa4.31□□□□□ -1.72
SPARC-202ENST00000520687 KRTAP19-6Q3LI70 58 aa4.28□□□□□ -1.72
SPARC-202ENST00000520687 MT1FP04733 61 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms