RNA–Protein interactions for RNA: ENST00000519141.5

SPIDR-209, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 1,699 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-209ENST00000519141 CHKB-CPT1BH3BT56 60 aa6.32□□□□□ -1.4
SPIDR-209ENST00000519141 KRTAP3-1Q9BYR8 98 aa6.32□□□□□ -1.4
SPIDR-209ENST00000519141 LCE2BO14633 110 aa6.31□□□□□ -1.4
SPIDR-209ENST00000519141 RBM12B-AS1Q9P1G2 102 aa6.3□□□□□ -1.4
SPIDR-209ENST00000519141 MPLKIPQ8TAP9 179 aa6.3□□□□□ -1.4
SPIDR-209ENST00000519141 SMIM26A0A096LP01 95 aa6.29□□□□□ -1.4
SPIDR-209ENST00000519141 KRTAP4-1Q9BYQ7 146 aa6.28□□□□□ -1.4
SPIDR-209ENST00000519141 H1FX-AS1Q4G0G2 97 aa6.22□□□□□ -1.41
SPIDR-209ENST00000519141 SPTSSBQ8NFR3 76 aa6.2□□□□□ -1.42
SPIDR-209ENST00000519141 S4R3F8 94 aa6.18□□□□□ -1.42
SPIDR-209ENST00000519141 LCE2AQ5TA79 106 aaPredicted RBP6.17□□□□□ -1.42
SPIDR-209ENST00000519141 PRO0628Q9UI54 55 aa6.17□□□□□ -1.42
SPIDR-209ENST00000519141 V9GYY9 64 aa6.17□□□□□ -1.42
SPIDR-209ENST00000519141 Q1T7F1 81 aa6.16□□□□□ -1.42
SPIDR-209ENST00000519141 LCA10Q71F78 164 aa6.15□□□□□ -1.42
SPIDR-209ENST00000519141 KRTAP4-8Q9BYQ9 185 aa6.14□□□□□ -1.43
SPIDR-209ENST00000519141 LINC01558Q9Y6Z2 57 aa6.11□□□□□ -1.43
SPIDR-209ENST00000519141 KRTAP19-2Q3LHN2 52 aa6.1□□□□□ -1.43
SPIDR-209ENST00000519141 PRR15LQ9BU68 103 aa6.08□□□□□ -1.44
SPIDR-209ENST00000519141 PSPHP1O15172 72 aa6.06□□□□□ -1.44
SPIDR-209ENST00000519141 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.05□□□□□ -1.44
SPIDR-209ENST00000519141 A0A1B0GU69 56 aa6.04□□□□□ -1.44
SPIDR-209ENST00000519141 CSAG1Q6PB30 78 aa6.04□□□□□ -1.44
SPIDR-209ENST00000519141 SEC61GP60059 68 aa6.02□□□□□ -1.45
SPIDR-209ENST00000519141 KRTAP9-2Q9BYQ4 174 aa6.01□□□□□ -1.45
SPIDR-209ENST00000519141 KRTAP9-6A0A140TA67 174 aa6□□□□□ -1.45
SPIDR-209ENST00000519141 Q5VV11 94 aa6□□□□□ -1.45
SPIDR-209ENST00000519141 LCE2CQ5TA81 110 aa5.98□□□□□ -1.45
SPIDR-209ENST00000519141 FLGP20930 4061 aaPredicted RBP5.96□□□□□ -1.46
SPIDR-209ENST00000519141 H0YAA0 97 aa5.9□□□□□ -1.47
SPIDR-209ENST00000519141 ADM2Q7Z4H4 148 aa5.9□□□□□ -1.47
SPIDR-209ENST00000519141 A6NED7 52 aa5.89□□□□□ -1.47
SPIDR-209ENST00000519141 MT1HP80294 61 aa5.89□□□□□ -1.47
SPIDR-209ENST00000519141 KRTAP10-6P60371 365 aaPredicted RBP5.88□□□□□ -1.47
SPIDR-209ENST00000519141 BRK1Q8WUW1 75 aa5.88□□□□□ -1.47
SPIDR-209ENST00000519141 FSIP2Q5CZC0 6907 aa5.87□□□□□ -1.47
SPIDR-209ENST00000519141 A0A1B0GU33 70 aa5.85□□□□□ -1.47
SPIDR-209ENST00000519141 M0R2T5 61 aa5.85□□□□□ -1.47
SPIDR-209ENST00000519141 UQCR11O14957 56 aa5.85□□□□□ -1.47
SPIDR-209ENST00000519141 P0C880 135 aa5.85□□□□□ -1.47
SPIDR-209ENST00000519141 KRTAP4-8A0A0G2JLE6 195 aa5.82□□□□□ -1.48
SPIDR-209ENST00000519141 LORP23490 312 aaPredicted RBP5.79□□□□□ -1.48
SPIDR-209ENST00000519141 MIR22HGQ0VDD5 57 aa5.79□□□□□ -1.48
SPIDR-209ENST00000519141 PMAIP1Q13794 54 aa5.78□□□□□ -1.48
SPIDR-209ENST00000519141 LCE3BQ5TA77 95 aa5.78□□□□□ -1.48
SPIDR-209ENST00000519141 CDC42SE1Q9NRR8 79 aa5.78□□□□□ -1.48
SPIDR-209ENST00000519141 SPATA8Q6RVD6 105 aa5.75□□□□□ -1.49
SPIDR-209ENST00000519141 A8MU10 97 aa5.72□□□□□ -1.49
SPIDR-209ENST00000519141 M0QZ58 72 aa5.72□□□□□ -1.49
SPIDR-209ENST00000519141 KRTAP13-4Q3LI77 160 aa5.72□□□□□ -1.49
SPIDR-209ENST00000519141 KRTAP9-9Q9BYP9 154 aa5.71□□□□□ -1.5
SPIDR-209ENST00000519141 KRTAP9-4Q9BYQ2 154 aa5.71□□□□□ -1.5
SPIDR-209ENST00000519141 R4GN34 69 aa5.7□□□□□ -1.5
SPIDR-209ENST00000519141 KRTAP4-7Q9BYR0 210 aa5.69□□□□□ -1.5
SPIDR-209ENST00000519141 CRCT1Q9UGL9 99 aa5.66□□□□□ -1.5
SPIDR-209ENST00000519141 CRIPTQ9P021 101 aa5.66□□□□□ -1.5
SPIDR-209ENST00000519141 A0A0D9SG42 100 aa5.64□□□□□ -1.51
SPIDR-209ENST00000519141 MT2AP02795 61 aa5.64□□□□□ -1.51
SPIDR-209ENST00000519141 KRTAP9-8Q9BYQ0 159 aa5.64□□□□□ -1.51
SPIDR-209ENST00000519141 KRTAP10-10P60014 251 aa5.61□□□□□ -1.51
SPIDR-209ENST00000519141 KTN1-AS1Q86SY8 53 aa5.61□□□□□ -1.51
SPIDR-209ENST00000519141 MT1FP04733 61 aa5.6□□□□□ -1.51
SPIDR-209ENST00000519141 LINC01554Q52M75 96 aa5.59□□□□□ -1.51
SPIDR-209ENST00000519141 USH2AO75445 5202 aa5.56□□□□□ -1.52
SPIDR-209ENST00000519141 K7ERS5 55 aa5.56□□□□□ -1.52
SPIDR-209ENST00000519141 SSPOA2VEC9 5147 aa5.52□□□□□ -1.53
SPIDR-209ENST00000519141 A6NN06 94 aa5.52□□□□□ -1.53
SPIDR-209ENST00000519141 SPRR2GQ9BYE4 73 aa5.52□□□□□ -1.53
SPIDR-209ENST00000519141 KRTAP12-1P59990 96 aa5.51□□□□□ -1.53
SPIDR-209ENST00000519141 SPINT4Q6UDR6 99 aa5.51□□□□□ -1.53
SPIDR-209ENST00000519141 KRTAP12-2P59991 146 aa5.5□□□□□ -1.53
SPIDR-209ENST00000519141 KRTAP5-3Q6L8H2 238 aa5.5□□□□□ -1.53
SPIDR-209ENST00000519141 KRTAP19-1Q8IUB9 90 aa5.5□□□□□ -1.53
SPIDR-209ENST00000519141 KRTAP4-12Q9BQ66 201 aa5.5□□□□□ -1.53
SPIDR-209ENST00000519141 KRTAP9-3Q9BYQ3 159 aa5.44□□□□□ -1.54
SPIDR-209ENST00000519141 KRTAP4-2Q9BYR5 136 aa5.43□□□□□ -1.54
SPIDR-209ENST00000519141 LCE1DQ5T752 114 aa5.41□□□□□ -1.54
SPIDR-209ENST00000519141 FCGBPQ9Y6R7 5405 aaPredicted RBP5.38□□□□□ -1.55
SPIDR-209ENST00000519141 KRTAP19-8Q3LI54 63 aa5.37□□□□□ -1.55
SPIDR-209ENST00000519141 PLAC4Q8WY50 150 aa5.37□□□□□ -1.55
SPIDR-209ENST00000519141 KRTAP4-9Q9BYQ8 210 aa5.36□□□□□ -1.55
SPIDR-209ENST00000519141 CAMK2N1Q7Z7J9 78 aa5.35□□□□□ -1.55
SPIDR-209ENST00000519141 MT1BP07438 61 aa5.3□□□□□ -1.56
SPIDR-209ENST00000519141 ROMO1P60602 79 aa5.3□□□□□ -1.56
SPIDR-209ENST00000519141 MACF1Q9UPN3 7388 aaKnown RBP5.29□□□□□ -1.56
SPIDR-209ENST00000519141 SYNE2Q8WXH0 6885 aaKnown RBP5.22□□□□□ -1.57
SPIDR-209ENST00000519141 PRAC1Q96KF2 57 aa5.21□□□□□ -1.57
SPIDR-209ENST00000519141 KRTAP9-7A8MTY7 169 aa5.21□□□□□ -1.58
SPIDR-209ENST00000519141 C10orf95Q9H7T3 257 aa5.21□□□□□ -1.58
SPIDR-209ENST00000519141 KRTAP19-6Q3LI70 58 aa5.18□□□□□ -1.58
SPIDR-209ENST00000519141 MT1XP80297 61 aa5.13□□□□□ -1.59
SPIDR-209ENST00000519141 KRTAP10-5P60370 271 aa5.12□□□□□ -1.59
SPIDR-209ENST00000519141 PRO2289Q9P1D8 64 aa5.11□□□□□ -1.59
SPIDR-209ENST00000519141 KRTAP25-1Q3LHN0 102 aa5.09□□□□□ -1.59
SPIDR-209ENST00000519141 TNP1P09430 55 aa5.08□□□□□ -1.6
SPIDR-209ENST00000519141 H3BS24 57 aa5.06□□□□□ -1.6
SPIDR-209ENST00000519141 KRTAP4-11Q9BYQ6 195 aa5.02□□□□□ -1.61
SPIDR-209ENST00000519141 KRTAP6-3Q3LI67 103 aa4.92□□□□□ -1.62
SPIDR-209ENST00000519141 MUC12Q9UKN1 5478 aa4.92□□□□□ -1.62
SPIDR-209ENST00000519141 KRTAP10-7P60409 375 aaPredicted RBP4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms