RNA–Protein interactions for RNA: ENST00000514830.5

PDLIM5-220, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-220ENST00000514830 KLKP1Q107X0 134 aa5.98□□□□□ -1.45
PDLIM5-220ENST00000514830 C4orf26Q17RF5 130 aa5.98□□□□□ -1.45
PDLIM5-220ENST00000514830 FSIP2Q5CZC0 6907 aa5.98□□□□□ -1.45
PDLIM5-220ENST00000514830 MT1HP80294 61 aa5.95□□□□□ -1.46
PDLIM5-220ENST00000514830 H1FX-AS1Q4G0G2 97 aa5.94□□□□□ -1.46
PDLIM5-220ENST00000514830 ANAPC13Q9BS18 74 aa5.94□□□□□ -1.46
PDLIM5-220ENST00000514830 KRTAP3-1Q9BYR8 98 aa5.94□□□□□ -1.46
PDLIM5-220ENST00000514830 C20orf197Q8N268 126 aa5.93□□□□□ -1.46
PDLIM5-220ENST00000514830 A8MUN3 132 aa5.92□□□□□ -1.46
PDLIM5-220ENST00000514830 SNURFQ9Y675 71 aa5.91□□□□□ -1.46
PDLIM5-220ENST00000514830 NDUFC1O43677 76 aa5.87□□□□□ -1.47
PDLIM5-220ENST00000514830 SPANXA2-OT1Q8N9U9 137 aa5.87□□□□□ -1.47
PDLIM5-220ENST00000514830 DMAC1Q96GE9 116 aa5.86□□□□□ -1.47
PDLIM5-220ENST00000514830 M0R2T5 61 aa5.84□□□□□ -1.47
PDLIM5-220ENST00000514830 LCE1DQ5T752 114 aa5.82□□□□□ -1.48
PDLIM5-220ENST00000514830 H7BZZ5 65 aa5.81□□□□□ -1.48
PDLIM5-220ENST00000514830 KRTAP4-7Q9BYR0 210 aa5.81□□□□□ -1.48
PDLIM5-220ENST00000514830 S4R3F8 94 aa5.81□□□□□ -1.48
PDLIM5-220ENST00000514830 CCDC179H3BU77 68 aa5.8□□□□□ -1.48
PDLIM5-220ENST00000514830 CYSTM1Q9H1C7 97 aa5.79□□□□□ -1.48
PDLIM5-220ENST00000514830 LCA10Q71F78 164 aa5.78□□□□□ -1.48
PDLIM5-220ENST00000514830 ACYP2P14621 99 aa5.77□□□□□ -1.49
PDLIM5-220ENST00000514830 KRTAP10-6P60371 365 aaPredicted RBP5.77□□□□□ -1.49
PDLIM5-220ENST00000514830 CSAG1Q6PB30 78 aa5.73□□□□□ -1.49
PDLIM5-220ENST00000514830 KRTAP9-8Q9BYQ0 159 aa5.7□□□□□ -1.5
PDLIM5-220ENST00000514830 KRTAP9-7A8MTY7 169 aa5.68□□□□□ -1.5
PDLIM5-220ENST00000514830 ATP5EP56381 51 aaPredicted RBP5.68□□□□□ -1.5
PDLIM5-220ENST00000514830 TMEM258P61165 79 aa5.66□□□□□ -1.5
PDLIM5-220ENST00000514830 KRTAP4-9Q9BYQ8 210 aa5.65□□□□□ -1.5
PDLIM5-220ENST00000514830 H0YAA0 97 aa5.64□□□□□ -1.51
PDLIM5-220ENST00000514830 MT2AP02795 61 aa5.64□□□□□ -1.51
PDLIM5-220ENST00000514830 SPTSSBQ8NFR3 76 aa5.64□□□□□ -1.51
PDLIM5-220ENST00000514830 CHKB-CPT1BH3BT56 60 aa5.62□□□□□ -1.51
PDLIM5-220ENST00000514830 PCP4P48539 62 aa5.62□□□□□ -1.51
PDLIM5-220ENST00000514830 COA5Q86WW8 74 aa5.61□□□□□ -1.51
PDLIM5-220ENST00000514830 MT1FP04733 61 aa5.59□□□□□ -1.51
PDLIM5-220ENST00000514830 KRTAP10-10P60014 251 aa5.55□□□□□ -1.52
PDLIM5-220ENST00000514830 KRTAP4-2Q9BYR5 136 aa5.53□□□□□ -1.52
PDLIM5-220ENST00000514830 KRTAP9-3Q9BYQ3 159 aa5.52□□□□□ -1.53
PDLIM5-220ENST00000514830 CRIPTQ9P021 101 aa5.5□□□□□ -1.53
PDLIM5-220ENST00000514830 ADM2Q7Z4H4 148 aa5.49□□□□□ -1.53
PDLIM5-220ENST00000514830 SERP1Q9Y6X1 66 aa5.47□□□□□ -1.53
PDLIM5-220ENST00000514830 LCE4AQ5TA78 99 aa5.45□□□□□ -1.54
PDLIM5-220ENST00000514830 P0C880 135 aa5.43□□□□□ -1.54
PDLIM5-220ENST00000514830 SPRR2GQ9BYE4 73 aa5.43□□□□□ -1.54
PDLIM5-220ENST00000514830 KRTAP4-11Q9BYQ6 195 aa5.43□□□□□ -1.54
PDLIM5-220ENST00000514830 KRTAP19-4Q3LI73 84 aa5.41□□□□□ -1.54
PDLIM5-220ENST00000514830 SSPOA2VEC9 5147 aa5.39□□□□□ -1.55
PDLIM5-220ENST00000514830 SEC61GP60059 68 aa5.38□□□□□ -1.55
PDLIM5-220ENST00000514830 RPS28P62857 69 aaKnown RBP5.37□□□□□ -1.55
PDLIM5-220ENST00000514830 USH2AO75445 5202 aa5.37□□□□□ -1.55
PDLIM5-220ENST00000514830 FCGBPQ9Y6R7 5405 aaPredicted RBP5.36□□□□□ -1.55
PDLIM5-220ENST00000514830 LINC01558Q9Y6Z2 57 aa5.35□□□□□ -1.55
PDLIM5-220ENST00000514830 KRTAP19-8Q3LI54 63 aa5.34□□□□□ -1.55
PDLIM5-220ENST00000514830 R4GN34 69 aa5.34□□□□□ -1.55
PDLIM5-220ENST00000514830 M0QZ58 72 aa5.33□□□□□ -1.56
PDLIM5-220ENST00000514830 A0A1B0GU69 56 aa5.32□□□□□ -1.56
PDLIM5-220ENST00000514830 PRR15LQ9BU68 103 aa5.29□□□□□ -1.56
PDLIM5-220ENST00000514830 V9GYY9 64 aa5.29□□□□□ -1.56
PDLIM5-220ENST00000514830 SYNE2Q8WXH0 6885 aaKnown RBP5.29□□□□□ -1.56
PDLIM5-220ENST00000514830 SMIM26A0A096LP01 95 aa5.28□□□□□ -1.56
PDLIM5-220ENST00000514830 LCE5AQ5TCM9 118 aa5.28□□□□□ -1.56
PDLIM5-220ENST00000514830 Q5VV11 94 aa5.28□□□□□ -1.56
PDLIM5-220ENST00000514830 Q1T7F1 81 aa5.27□□□□□ -1.57
PDLIM5-220ENST00000514830 MACF1Q9UPN3 7388 aaKnown RBP5.27□□□□□ -1.57
PDLIM5-220ENST00000514830 A0A1B0GU33 70 aa5.26□□□□□ -1.57
PDLIM5-220ENST00000514830 MT1BP07438 61 aa5.25□□□□□ -1.57
PDLIM5-220ENST00000514830 KRTAP13-4Q3LI77 160 aa5.22□□□□□ -1.57
PDLIM5-220ENST00000514830 A6NN06 94 aa5.21□□□□□ -1.58
PDLIM5-220ENST00000514830 KRTAP19-6Q3LI70 58 aa5.21□□□□□ -1.58
PDLIM5-220ENST00000514830 KRTAP6-3Q3LI67 103 aa5.2□□□□□ -1.58
PDLIM5-220ENST00000514830 LINC01554Q52M75 96 aa5.15□□□□□ -1.59
PDLIM5-220ENST00000514830 SPATA8Q6RVD6 105 aa5.14□□□□□ -1.59
PDLIM5-220ENST00000514830 UQCR11O14957 56 aa5.13□□□□□ -1.59
PDLIM5-220ENST00000514830 PLAC4Q8WY50 150 aa5.13□□□□□ -1.59
PDLIM5-220ENST00000514830 PSPHP1O15172 72 aa5.11□□□□□ -1.59
PDLIM5-220ENST00000514830 KRTAP10-5P60370 271 aa5.07□□□□□ -1.6
PDLIM5-220ENST00000514830 A0A0D9SG42 100 aa5.05□□□□□ -1.6
PDLIM5-220ENST00000514830 KRTAP12-1P59990 96 aa5.03□□□□□ -1.6
PDLIM5-220ENST00000514830 MIR22HGQ0VDD5 57 aa5.03□□□□□ -1.6
PDLIM5-220ENST00000514830 A8MU10 97 aa5.02□□□□□ -1.61
PDLIM5-220ENST00000514830 MT1XP80297 61 aa5.01□□□□□ -1.61
PDLIM5-220ENST00000514830 PRO2289Q9P1D8 64 aa5.01□□□□□ -1.61
PDLIM5-220ENST00000514830 NEBP20929 6669 aa5.01□□□□□ -1.61
PDLIM5-220ENST00000514830 KRTAP5-3Q6L8H2 238 aa5□□□□□ -1.61
PDLIM5-220ENST00000514830 H3BS24 57 aa4.99□□□□□ -1.61
PDLIM5-220ENST00000514830 KRTAP20-1Q3LI63 56 aa4.99□□□□□ -1.61
PDLIM5-220ENST00000514830 KRTAP12-2P59991 146 aa4.98□□□□□ -1.61
PDLIM5-220ENST00000514830 A6NED7 52 aa4.97□□□□□ -1.61
PDLIM5-220ENST00000514830 SPINT4Q6UDR6 99 aa4.97□□□□□ -1.61
PDLIM5-220ENST00000514830 CAMK2N1Q7Z7J9 78 aa4.94□□□□□ -1.62
PDLIM5-220ENST00000514830 CDC42SE1Q9NRR8 79 aa4.9□□□□□ -1.63
PDLIM5-220ENST00000514830 K7ERS5 55 aa4.86□□□□□ -1.63
PDLIM5-220ENST00000514830 MUC12Q9UKN1 5478 aa4.85□□□□□ -1.63
PDLIM5-220ENST00000514830 KRTAP2-3P0C7H8 128 aa4.79□□□□□ -1.64
PDLIM5-220ENST00000514830 KRTAP10-12P60413 245 aa4.79□□□□□ -1.64
PDLIM5-220ENST00000514830 KRTAP2-4Q9BYR9 128 aa4.79□□□□□ -1.64
PDLIM5-220ENST00000514830 KRTAP5-9P26371 169 aa4.78□□□□□ -1.64
PDLIM5-220ENST00000514830 C10orf95Q9H7T3 257 aa4.77□□□□□ -1.65
PDLIM5-220ENST00000514830 KRTAP10-7P60409 375 aaPredicted RBP4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms