RNA–Protein interactions for RNA: ENST00000508321.1

HTT-204, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 386 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-204ENST00000508321 DMAC1Q96GE9 116 aa4.96□□□□□ -1.62
HTT-204ENST00000508321 ANAPC13Q9BS18 74 aa4.96□□□□□ -1.62
HTT-204ENST00000508321 SNURFQ9Y675 71 aa4.95□□□□□ -1.62
HTT-204ENST00000508321 SPANXA2-OT1Q8N9U9 137 aa4.94□□□□□ -1.62
HTT-204ENST00000508321 NDUFC1O43677 76 aa4.93□□□□□ -1.62
HTT-204ENST00000508321 LCA10Q71F78 164 aa4.93□□□□□ -1.62
HTT-204ENST00000508321 CSAG1Q6PB30 78 aa4.92□□□□□ -1.62
HTT-204ENST00000508321 KRTAP9-8Q9BYQ0 159 aa4.89□□□□□ -1.63
HTT-204ENST00000508321 ACYP2P14621 99 aa4.88□□□□□ -1.63
HTT-204ENST00000508321 MT2AP02795 61 aa4.86□□□□□ -1.63
HTT-204ENST00000508321 KRTAP3-3Q9BYR6 98 aa4.86□□□□□ -1.63
HTT-204ENST00000508321 H7BZZ5 65 aa4.84□□□□□ -1.63
HTT-204ENST00000508321 SPTSSBQ8NFR3 76 aa4.83□□□□□ -1.64
HTT-204ENST00000508321 MT1FP04733 61 aa4.82□□□□□ -1.64
HTT-204ENST00000508321 H0YAA0 97 aa4.81□□□□□ -1.64
HTT-204ENST00000508321 CHKB-CPT1BH3BT56 60 aa4.81□□□□□ -1.64
HTT-204ENST00000508321 KRTAP10-10P60014 251 aa4.81□□□□□ -1.64
HTT-204ENST00000508321 KRTAP9-7A8MTY7 169 aa4.8□□□□□ -1.64
HTT-204ENST00000508321 CCDC179H3BU77 68 aa4.8□□□□□ -1.64
HTT-204ENST00000508321 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.79□□□□□ -1.64
HTT-204ENST00000508321 CYSTM1Q9H1C7 97 aa4.79□□□□□ -1.64
HTT-204ENST00000508321 ATP5EP56381 51 aaPredicted RBP4.78□□□□□ -1.64
HTT-204ENST00000508321 COA5Q86WW8 74 aa4.74□□□□□ -1.65
HTT-204ENST00000508321 TMEM258P61165 79 aa4.73□□□□□ -1.65
HTT-204ENST00000508321 KRTAP9-3Q9BYQ3 159 aa4.73□□□□□ -1.65
HTT-204ENST00000508321 CRIPTQ9P021 101 aa4.73□□□□□ -1.65
HTT-204ENST00000508321 RPS28P62857 69 aaKnown RBP4.71□□□□□ -1.66
HTT-204ENST00000508321 ADM2Q7Z4H4 148 aa4.69□□□□□ -1.66
HTT-204ENST00000508321 SSPOA2VEC9 5147 aa4.69□□□□□ -1.66
HTT-204ENST00000508321 SPRR2GQ9BYE4 73 aa4.65□□□□□ -1.67
HTT-204ENST00000508321 USH2AO75445 5202 aa4.65□□□□□ -1.67
HTT-204ENST00000508321 LCE2BO14633 110 aa4.63□□□□□ -1.67
HTT-204ENST00000508321 KRTAP19-1Q8IUB9 90 aa4.62□□□□□ -1.67
HTT-204ENST00000508321 KRTAP3-2Q9BYR7 98 aa4.61□□□□□ -1.67
HTT-204ENST00000508321 FCGBPQ9Y6R7 5405 aaPredicted RBP4.6□□□□□ -1.67
HTT-204ENST00000508321 P0C880 135 aa4.6□□□□□ -1.67
HTT-204ENST00000508321 SEC61GP60059 68 aa4.6□□□□□ -1.67
HTT-204ENST00000508321 R4GN34 69 aa4.6□□□□□ -1.67
HTT-204ENST00000508321 KRTAP19-8Q3LI54 63 aa4.57□□□□□ -1.68
HTT-204ENST00000508321 Q5VV11 94 aa4.56□□□□□ -1.68
HTT-204ENST00000508321 SERP1Q9Y6X1 66 aa4.56□□□□□ -1.68
HTT-204ENST00000508321 M0QZ58 72 aa4.55□□□□□ -1.68
HTT-204ENST00000508321 MACF1Q9UPN3 7388 aaKnown RBP4.51□□□□□ -1.69
HTT-204ENST00000508321 A0A1B0GU69 56 aa4.51□□□□□ -1.69
HTT-204ENST00000508321 SYNE2Q8WXH0 6885 aaKnown RBP4.51□□□□□ -1.69
HTT-204ENST00000508321 SMIM26A0A096LP01 95 aa4.5□□□□□ -1.69
HTT-204ENST00000508321 PRR15LQ9BU68 103 aa4.5□□□□□ -1.69
HTT-204ENST00000508321 MT1BP07438 61 aa4.49□□□□□ -1.69
HTT-204ENST00000508321 KRTAP19-6Q3LI70 58 aa4.48□□□□□ -1.69
HTT-204ENST00000508321 LINC01558Q9Y6Z2 57 aa4.47□□□□□ -1.69
HTT-204ENST00000508321 A0A1B0GU33 70 aa4.45□□□□□ -1.7
HTT-204ENST00000508321 A6NN06 94 aa4.45□□□□□ -1.7
HTT-204ENST00000508321 V9GYY9 64 aa4.44□□□□□ -1.7
HTT-204ENST00000508321 LINC01554Q52M75 96 aa4.43□□□□□ -1.7
HTT-204ENST00000508321 PLAC4Q8WY50 150 aa4.43□□□□□ -1.7
HTT-204ENST00000508321 KRTAP13-4Q3LI77 160 aa4.4□□□□□ -1.71
HTT-204ENST00000508321 KRTAP10-5P60370 271 aa4.37□□□□□ -1.71
HTT-204ENST00000508321 Q1T7F1 81 aa4.37□□□□□ -1.71
HTT-204ENST00000508321 KRTAP6-3Q3LI67 103 aa4.37□□□□□ -1.71
HTT-204ENST00000508321 PRO2289Q9P1D8 64 aa4.37□□□□□ -1.71
HTT-204ENST00000508321 SPATA8Q6RVD6 105 aa4.34□□□□□ -1.71
HTT-204ENST00000508321 UQCR11O14957 56 aa4.33□□□□□ -1.72
HTT-204ENST00000508321 NEBP20929 6669 aa4.31□□□□□ -1.72
HTT-204ENST00000508321 A0A0D9SG42 100 aa4.3□□□□□ -1.72
HTT-204ENST00000508321 PRO0628Q9UI54 55 aa4.3□□□□□ -1.72
HTT-204ENST00000508321 MT1XP80297 61 aa4.29□□□□□ -1.72
HTT-204ENST00000508321 PSPHP1O15172 72 aa4.27□□□□□ -1.73
HTT-204ENST00000508321 CAMK2N1Q7Z7J9 78 aa4.26□□□□□ -1.73
HTT-204ENST00000508321 KRTAP12-1P59990 96 aa4.25□□□□□ -1.73
HTT-204ENST00000508321 SPINT4Q6UDR6 99 aa4.24□□□□□ -1.73
HTT-204ENST00000508321 A8MU10 97 aa4.23□□□□□ -1.73
HTT-204ENST00000508321 H3BS24 57 aa4.23□□□□□ -1.73
HTT-204ENST00000508321 MIR22HGQ0VDD5 57 aa4.23□□□□□ -1.73
HTT-204ENST00000508321 KRTAP12-2P59991 146 aa4.21□□□□□ -1.74
HTT-204ENST00000508321 BRK1Q8WUW1 75 aa4.21□□□□□ -1.74
HTT-204ENST00000508321 A6NED7 52 aa4.18□□□□□ -1.74
HTT-204ENST00000508321 MUC12Q9UKN1 5478 aa4.17□□□□□ -1.74
HTT-204ENST00000508321 KRTAP20-1Q3LI63 56 aa4.17□□□□□ -1.74
HTT-204ENST00000508321 K7ERS5 55 aa4.16□□□□□ -1.74
HTT-204ENST00000508321 KRTAP10-12P60413 245 aa4.1□□□□□ -1.75
HTT-204ENST00000508321 A0A0A0MQY5 61 aa4.08□□□□□ -1.76
HTT-204ENST00000508321 CDC42SE1Q9NRR8 79 aa4.08□□□□□ -1.76
HTT-204ENST00000508321 KRTAP5-9P26371 169 aa4.07□□□□□ -1.76
HTT-204ENST00000508321 KRTAP10-7P60409 375 aaPredicted RBP4.07□□□□□ -1.76
HTT-204ENST00000508321 KMT2DO14686 5537 aa4.03□□□□□ -1.76
HTT-204ENST00000508321 TNP1P09430 55 aa4.02□□□□□ -1.77
HTT-204ENST00000508321 PMAIP1Q13794 54 aa4.02□□□□□ -1.77
HTT-204ENST00000508321 KRTAP8-1Q8IUC2 63 aa4.02□□□□□ -1.77
HTT-204ENST00000508321 C10orf95Q9H7T3 257 aa4.01□□□□□ -1.77
HTT-204ENST00000508321 MDN1Q9NU22 5596 aa4□□□□□ -1.77
HTT-204ENST00000508321 KRTAP2-3P0C7H8 128 aa3.98□□□□□ -1.77
HTT-204ENST00000508321 KRTAP2-4Q9BYR9 128 aa3.98□□□□□ -1.77
HTT-204ENST00000508321 KRTAP4-8A0A0G2JLE6 195 aa3.96□□□□□ -1.78
HTT-204ENST00000508321 KRTAP4-8Q9BYQ9 185 aa3.96□□□□□ -1.78
HTT-204ENST00000508321 KRTAP25-1Q3LHN0 102 aa3.95□□□□□ -1.78
HTT-204ENST00000508321 KTN1-AS1Q86SY8 53 aa3.93□□□□□ -1.78
HTT-204ENST00000508321 SPRR2FQ96RM1 72 aa3.93□□□□□ -1.78
HTT-204ENST00000508321 ROMO1P60602 79 aa3.88□□□□□ -1.79
HTT-204ENST00000508321 LCE3AQ5TA76 89 aa3.85□□□□□ -1.79
HTT-204ENST00000508321 KRTAP23-1A1A580 65 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms