RNA–Protein interactions for RNA: ENST00000506563.5

CDK7-204, Transcript of cyclin dependent kinase 7, humanhuman

TSL 5

Gene CDK7, Length 728 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7-204ENST00000506563 ANAPC13Q9BS18 74 aa6.34□□□□□ -1.39
CDK7-204ENST00000506563 COX7CP15954 63 aa6.32□□□□□ -1.4
CDK7-204ENST00000506563 H1FX-AS1Q4G0G2 97 aa6.32□□□□□ -1.4
CDK7-204ENST00000506563 KRTAP3-1Q9BYR8 98 aa6.3□□□□□ -1.4
CDK7-204ENST00000506563 KRTAP9-9Q9BYP9 154 aa6.28□□□□□ -1.4
CDK7-204ENST00000506563 KRTAP9-4Q9BYQ2 154 aa6.28□□□□□ -1.4
CDK7-204ENST00000506563 FLGP20930 4061 aaPredicted RBP6.28□□□□□ -1.4
CDK7-204ENST00000506563 FSIP2Q5CZC0 6907 aa6.26□□□□□ -1.41
CDK7-204ENST00000506563 S4R3F8 94 aa6.22□□□□□ -1.41
CDK7-204ENST00000506563 CRCT1Q9UGL9 99 aa6.21□□□□□ -1.42
CDK7-204ENST00000506563 CCDC179H3BU77 68 aa6.2□□□□□ -1.42
CDK7-204ENST00000506563 A8MUN3 132 aa6.19□□□□□ -1.42
CDK7-204ENST00000506563 LCA10Q71F78 164 aa6.18□□□□□ -1.42
CDK7-204ENST00000506563 CYSTM1Q9H1C7 97 aa6.18□□□□□ -1.42
CDK7-204ENST00000506563 KRTAP4-8A0A0G2JLE6 195 aa6.17□□□□□ -1.42
CDK7-204ENST00000506563 KRTAP10-6P60371 365 aaPredicted RBP6.17□□□□□ -1.42
CDK7-204ENST00000506563 DMAC1Q96GE9 116 aa6.17□□□□□ -1.42
CDK7-204ENST00000506563 NDUFC1O43677 76 aa6.13□□□□□ -1.43
CDK7-204ENST00000506563 H7BZZ5 65 aa6.12□□□□□ -1.43
CDK7-204ENST00000506563 SPANXA2-OT1Q8N9U9 137 aa6.12□□□□□ -1.43
CDK7-204ENST00000506563 ACYP2P14621 99 aa6.11□□□□□ -1.43
CDK7-204ENST00000506563 CSAG1Q6PB30 78 aa6.1□□□□□ -1.43
CDK7-204ENST00000506563 CHKB-CPT1BH3BT56 60 aa6.06□□□□□ -1.44
CDK7-204ENST00000506563 KRTAP9-8Q9BYQ0 159 aa6.04□□□□□ -1.44
CDK7-204ENST00000506563 MT2AP02795 61 aa6.03□□□□□ -1.44
CDK7-204ENST00000506563 KRTAP10-10P60014 251 aa6□□□□□ -1.45
CDK7-204ENST00000506563 LCE1DQ5T752 114 aa6□□□□□ -1.45
CDK7-204ENST00000506563 COA5Q86WW8 74 aa6□□□□□ -1.45
CDK7-204ENST00000506563 MT1FP04733 61 aa5.99□□□□□ -1.45
CDK7-204ENST00000506563 PCP4P48539 62 aa5.98□□□□□ -1.45
CDK7-204ENST00000506563 SPTSSBQ8NFR3 76 aa5.97□□□□□ -1.45
CDK7-204ENST00000506563 KRTAP9-7A8MTY7 169 aa5.95□□□□□ -1.46
CDK7-204ENST00000506563 KRTAP4-7Q9BYR0 210 aa5.95□□□□□ -1.46
CDK7-204ENST00000506563 ATP5EP56381 51 aaPredicted RBP5.94□□□□□ -1.46
CDK7-204ENST00000506563 TMEM258P61165 79 aa5.94□□□□□ -1.46
CDK7-204ENST00000506563 ADM2Q7Z4H4 148 aa5.91□□□□□ -1.46
CDK7-204ENST00000506563 H0YAA0 97 aa5.87□□□□□ -1.47
CDK7-204ENST00000506563 LCE4AQ5TA78 99 aa5.85□□□□□ -1.47
CDK7-204ENST00000506563 KRTAP9-3Q9BYQ3 159 aa5.83□□□□□ -1.48
CDK7-204ENST00000506563 KRTAP4-9Q9BYQ8 210 aa5.82□□□□□ -1.48
CDK7-204ENST00000506563 P0C880 135 aa5.81□□□□□ -1.48
CDK7-204ENST00000506563 H3BS24 57 aa5.77□□□□□ -1.49
CDK7-204ENST00000506563 SERP1Q9Y6X1 66 aa5.77□□□□□ -1.49
CDK7-204ENST00000506563 SEC61GP60059 68 aa5.75□□□□□ -1.49
CDK7-204ENST00000506563 CRIPTQ9P021 101 aa5.74□□□□□ -1.49
CDK7-204ENST00000506563 KRTAP19-4Q3LI73 84 aa5.73□□□□□ -1.49
CDK7-204ENST00000506563 R4GN34 69 aa5.72□□□□□ -1.49
CDK7-204ENST00000506563 M0QZ58 72 aa5.71□□□□□ -1.5
CDK7-204ENST00000506563 SPRR2GQ9BYE4 73 aa5.7□□□□□ -1.5
CDK7-204ENST00000506563 A0A1B0GU69 56 aa5.69□□□□□ -1.5
CDK7-204ENST00000506563 KRTAP4-2Q9BYR5 136 aa5.69□□□□□ -1.5
CDK7-204ENST00000506563 LINC01554Q52M75 96 aa5.65□□□□□ -1.5
CDK7-204ENST00000506563 Q5VV11 94 aa5.63□□□□□ -1.51
CDK7-204ENST00000506563 USH2AO75445 5202 aa5.63□□□□□ -1.51
CDK7-204ENST00000506563 PRR15LQ9BU68 103 aa5.62□□□□□ -1.51
CDK7-204ENST00000506563 KRTAP4-11Q9BYQ6 195 aa5.62□□□□□ -1.51
CDK7-204ENST00000506563 LINC01558Q9Y6Z2 57 aa5.62□□□□□ -1.51
CDK7-204ENST00000506563 A0A1B0GU33 70 aa5.6□□□□□ -1.51
CDK7-204ENST00000506563 KRTAP19-8Q3LI54 63 aa5.6□□□□□ -1.51
CDK7-204ENST00000506563 KRTAP13-4Q3LI77 160 aa5.58□□□□□ -1.52
CDK7-204ENST00000506563 MT1BP07438 61 aa5.57□□□□□ -1.52
CDK7-204ENST00000506563 SMIM26A0A096LP01 95 aa5.56□□□□□ -1.52
CDK7-204ENST00000506563 SPATA8Q6RVD6 105 aa5.56□□□□□ -1.52
CDK7-204ENST00000506563 RPS28P62857 69 aaKnown RBP5.55□□□□□ -1.52
CDK7-204ENST00000506563 LCE5AQ5TCM9 118 aa5.54□□□□□ -1.52
CDK7-204ENST00000506563 V9GYY9 64 aa5.53□□□□□ -1.52
CDK7-204ENST00000506563 A0A0D9SG42 100 aa5.52□□□□□ -1.53
CDK7-204ENST00000506563 PSPHP1O15172 72 aa5.52□□□□□ -1.53
CDK7-204ENST00000506563 SYNE2Q8WXH0 6885 aaKnown RBP5.52□□□□□ -1.53
CDK7-204ENST00000506563 Q1T7F1 81 aa5.51□□□□□ -1.53
CDK7-204ENST00000506563 PLAC4Q8WY50 150 aa5.51□□□□□ -1.53
CDK7-204ENST00000506563 SSPOA2VEC9 5147 aa5.5□□□□□ -1.53
CDK7-204ENST00000506563 KRTAP19-6Q3LI70 58 aa5.45□□□□□ -1.54
CDK7-204ENST00000506563 A8MU10 97 aa5.44□□□□□ -1.54
CDK7-204ENST00000506563 FCGBPQ9Y6R7 5405 aaPredicted RBP5.44□□□□□ -1.54
CDK7-204ENST00000506563 UQCR11O14957 56 aa5.42□□□□□ -1.54
CDK7-204ENST00000506563 SPINT4Q6UDR6 99 aa5.41□□□□□ -1.54
CDK7-204ENST00000506563 A6NN06 94 aa5.4□□□□□ -1.54
CDK7-204ENST00000506563 MACF1Q9UPN3 7388 aaKnown RBP5.36□□□□□ -1.55
CDK7-204ENST00000506563 KRTAP10-5P60370 271 aa5.36□□□□□ -1.55
CDK7-204ENST00000506563 MIR22HGQ0VDD5 57 aa5.36□□□□□ -1.55
CDK7-204ENST00000506563 A6NED7 52 aa5.35□□□□□ -1.55
CDK7-204ENST00000506563 KRTAP12-1P59990 96 aa5.34□□□□□ -1.55
CDK7-204ENST00000506563 CAMK2N1Q7Z7J9 78 aa5.34□□□□□ -1.55
CDK7-204ENST00000506563 KRTAP12-2P59991 146 aa5.33□□□□□ -1.56
CDK7-204ENST00000506563 PRO2289Q9P1D8 64 aa5.33□□□□□ -1.56
CDK7-204ENST00000506563 MT1XP80297 61 aa5.32□□□□□ -1.56
CDK7-204ENST00000506563 NEBP20929 6669 aa5.25□□□□□ -1.57
CDK7-204ENST00000506563 K7ERS5 55 aa5.19□□□□□ -1.58
CDK7-204ENST00000506563 KRTAP20-1Q3LI63 56 aa5.17□□□□□ -1.58
CDK7-204ENST00000506563 KRTAP6-3Q3LI67 103 aa5.17□□□□□ -1.58
CDK7-204ENST00000506563 CDC42SE1Q9NRR8 79 aa5.14□□□□□ -1.59
CDK7-204ENST00000506563 KRTAP10-7P60409 375 aaPredicted RBP5.12□□□□□ -1.59
CDK7-204ENST00000506563 C10orf95Q9H7T3 257 aa5.08□□□□□ -1.6
CDK7-204ENST00000506563 KRTAP5-3Q6L8H2 238 aa5.06□□□□□ -1.6
CDK7-204ENST00000506563 BRK1Q8WUW1 75 aa5.05□□□□□ -1.6
CDK7-204ENST00000506563 KRTAP10-12P60413 245 aa5.03□□□□□ -1.6
CDK7-204ENST00000506563 TNP1P09430 55 aa4.99□□□□□ -1.61
CDK7-204ENST00000506563 MUC12Q9UKN1 5478 aa4.97□□□□□ -1.61
CDK7-204ENST00000506563 KRTAP8-1Q8IUC2 63 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 108 ms