RNA–Protein interactions for RNA: ENST00000505728.1

COL4A5-208, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 3

Gene COL4A5, Length 537 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-208ENST00000505728 DMAC1Q96GE9 116 aa4.28□□□□□ -1.72
COL4A5-208ENST00000505728 SPINK7P58062 85 aa4.27□□□□□ -1.73
COL4A5-208ENST00000505728 LCE3BQ5TA77 95 aa4.27□□□□□ -1.73
COL4A5-208ENST00000505728 COA5Q86WW8 74 aa4.27□□□□□ -1.73
COL4A5-208ENST00000505728 MUC2Q02817 5179 aa4.26□□□□□ -1.73
COL4A5-208ENST00000505728 A8MUN3 132 aa4.24□□□□□ -1.73
COL4A5-208ENST00000505728 V9GYY9 64 aa4.22□□□□□ -1.73
COL4A5-208ENST00000505728 C4orf26Q17RF5 130 aa4.21□□□□□ -1.74
COL4A5-208ENST00000505728 Q1T7F1 81 aa4.21□□□□□ -1.74
COL4A5-208ENST00000505728 CHKB-CPT1BH3BT56 60 aa4.2□□□□□ -1.74
COL4A5-208ENST00000505728 KRTAP19-1Q8IUB9 90 aa4.2□□□□□ -1.74
COL4A5-208ENST00000505728 COX6B2Q6YFQ2 88 aa4.19□□□□□ -1.74
COL4A5-208ENST00000505728 FAT4Q6V0I7 4981 aa4.18□□□□□ -1.74
COL4A5-208ENST00000505728 MPLKIPQ8TAP9 179 aa4.18□□□□□ -1.74
COL4A5-208ENST00000505728 KRTAP9-9Q9BYP9 154 aa4.17□□□□□ -1.74
COL4A5-208ENST00000505728 KRTAP9-4Q9BYQ2 154 aa4.17□□□□□ -1.74
COL4A5-208ENST00000505728 SEC61BP60468 96 aaKnown RBP4.16□□□□□ -1.74
COL4A5-208ENST00000505728 KRTAP3-1Q9BYR8 98 aa4.16□□□□□ -1.74
COL4A5-208ENST00000505728 LINC01558Q9Y6Z2 57 aa4.16□□□□□ -1.74
COL4A5-208ENST00000505728 MUC17Q685J3 4493 aa4.15□□□□□ -1.75
COL4A5-208ENST00000505728 SPTSSBQ8NFR3 76 aa4.14□□□□□ -1.75
COL4A5-208ENST00000505728 KRTAP4-8A0A0G2JLE6 195 aa4.12□□□□□ -1.75
COL4A5-208ENST00000505728 RBM12B-AS1Q9P1G2 102 aa4.1□□□□□ -1.75
COL4A5-208ENST00000505728 PSPHP1O15172 72 aa4.09□□□□□ -1.75
COL4A5-208ENST00000505728 Q5VV11 94 aa4.08□□□□□ -1.76
COL4A5-208ENST00000505728 PRR15LQ9BU68 103 aa4.08□□□□□ -1.76
COL4A5-208ENST00000505728 H1FX-AS1Q4G0G2 97 aa4.07□□□□□ -1.76
COL4A5-208ENST00000505728 A0A1B0GU69 56 aa4.05□□□□□ -1.76
COL4A5-208ENST00000505728 S4R3F8 94 aa4.04□□□□□ -1.76
COL4A5-208ENST00000505728 SEC61GP60059 68 aa4.03□□□□□ -1.76
COL4A5-208ENST00000505728 KRTAP4-1Q9BYQ7 146 aa4.02□□□□□ -1.77
COL4A5-208ENST00000505728 LCA10Q71F78 164 aa4.01□□□□□ -1.77
COL4A5-208ENST00000505728 LCE1DQ5T752 114 aa4□□□□□ -1.77
COL4A5-208ENST00000505728 A6NED7 52 aa3.98□□□□□ -1.77
COL4A5-208ENST00000505728 KRTAP4-7Q9BYR0 210 aa3.98□□□□□ -1.77
COL4A5-208ENST00000505728 BRK1Q8WUW1 75 aa3.97□□□□□ -1.77
COL4A5-208ENST00000505728 FSIP2Q5CZC0 6907 aa3.97□□□□□ -1.77
COL4A5-208ENST00000505728 CSAG1Q6PB30 78 aa3.96□□□□□ -1.78
COL4A5-208ENST00000505728 UQCR11O14957 56 aa3.95□□□□□ -1.78
COL4A5-208ENST00000505728 PRO0628Q9UI54 55 aa3.95□□□□□ -1.78
COL4A5-208ENST00000505728 CDC42SE1Q9NRR8 79 aa3.94□□□□□ -1.78
COL4A5-208ENST00000505728 KRTAP19-2Q3LHN2 52 aa3.93□□□□□ -1.78
COL4A5-208ENST00000505728 A0A1B0GU33 70 aa3.92□□□□□ -1.78
COL4A5-208ENST00000505728 SPATA8Q6RVD6 105 aa3.92□□□□□ -1.78
COL4A5-208ENST00000505728 MIR22HGQ0VDD5 57 aa3.9□□□□□ -1.79
COL4A5-208ENST00000505728 H0YAA0 97 aa3.89□□□□□ -1.79
COL4A5-208ENST00000505728 KRTAP10-6P60371 365 aaPredicted RBP3.89□□□□□ -1.79
COL4A5-208ENST00000505728 KRTAP4-9Q9BYQ8 210 aa3.89□□□□□ -1.79
COL4A5-208ENST00000505728 FLGP20930 4061 aaPredicted RBP3.88□□□□□ -1.79
COL4A5-208ENST00000505728 CRCT1Q9UGL9 99 aa3.88□□□□□ -1.79
COL4A5-208ENST00000505728 A8MU10 97 aa3.86□□□□□ -1.79
COL4A5-208ENST00000505728 ADM2Q7Z4H4 148 aa3.86□□□□□ -1.79
COL4A5-208ENST00000505728 MT1HP80294 61 aa3.84□□□□□ -1.79
COL4A5-208ENST00000505728 P0C880 135 aa3.83□□□□□ -1.8
COL4A5-208ENST00000505728 KRTAP19-4Q3LI73 84 aa3.82□□□□□ -1.8
COL4A5-208ENST00000505728 LCE4AQ5TA78 99 aa3.82□□□□□ -1.8
COL4A5-208ENST00000505728 KRTAP4-2Q9BYR5 136 aa3.8□□□□□ -1.8
COL4A5-208ENST00000505728 M0QZ58 72 aa3.79□□□□□ -1.8
COL4A5-208ENST00000505728 PMAIP1Q13794 54 aa3.78□□□□□ -1.8
COL4A5-208ENST00000505728 KRTAP13-4Q3LI77 160 aa3.76□□□□□ -1.81
COL4A5-208ENST00000505728 A6NN06 94 aa3.75□□□□□ -1.81
COL4A5-208ENST00000505728 K7ERS5 55 aa3.74□□□□□ -1.81
COL4A5-208ENST00000505728 KRTAP4-11Q9BYQ6 195 aa3.74□□□□□ -1.81
COL4A5-208ENST00000505728 KRTAP9-7A8MTY7 169 aa3.73□□□□□ -1.81
COL4A5-208ENST00000505728 R4GN34 69 aa3.72□□□□□ -1.81
COL4A5-208ENST00000505728 A0A0D9SG42 100 aa3.71□□□□□ -1.82
COL4A5-208ENST00000505728 M0R2T5 61 aa3.71□□□□□ -1.82
COL4A5-208ENST00000505728 CRIPTQ9P021 101 aa3.71□□□□□ -1.82
COL4A5-208ENST00000505728 LCE5AQ5TCM9 118 aa3.68□□□□□ -1.82
COL4A5-208ENST00000505728 SSPOA2VEC9 5147 aa3.66□□□□□ -1.82
COL4A5-208ENST00000505728 KRTAP12-1P59990 96 aa3.65□□□□□ -1.83
COL4A5-208ENST00000505728 H3BS24 57 aa3.64□□□□□ -1.83
COL4A5-208ENST00000505728 SPINT4Q6UDR6 99 aa3.64□□□□□ -1.83
COL4A5-208ENST00000505728 KTN1-AS1Q86SY8 53 aa3.64□□□□□ -1.83
COL4A5-208ENST00000505728 USH2AO75445 5202 aa3.63□□□□□ -1.83
COL4A5-208ENST00000505728 KRTAP12-2P59991 146 aa3.63□□□□□ -1.83
COL4A5-208ENST00000505728 LINC01554Q52M75 96 aa3.63□□□□□ -1.83
COL4A5-208ENST00000505728 KRTAP9-3Q9BYQ3 159 aa3.62□□□□□ -1.83
COL4A5-208ENST00000505728 KRTAP9-8Q9BYQ0 159 aa3.61□□□□□ -1.83
COL4A5-208ENST00000505728 MT2AP02795 61 aa3.6□□□□□ -1.83
COL4A5-208ENST00000505728 KRTAP10-10P60014 251 aa3.59□□□□□ -1.83
COL4A5-208ENST00000505728 ROMO1P60602 79 aa3.58□□□□□ -1.84
COL4A5-208ENST00000505728 SPRR2GQ9BYE4 73 aa3.58□□□□□ -1.84
COL4A5-208ENST00000505728 MACF1Q9UPN3 7388 aaKnown RBP3.58□□□□□ -1.84
COL4A5-208ENST00000505728 MT1FP04733 61 aa3.57□□□□□ -1.84
COL4A5-208ENST00000505728 FCGBPQ9Y6R7 5405 aaPredicted RBP3.56□□□□□ -1.84
COL4A5-208ENST00000505728 SYNE2Q8WXH0 6885 aaKnown RBP3.54□□□□□ -1.84
COL4A5-208ENST00000505728 KRTAP19-8Q3LI54 63 aa3.5□□□□□ -1.85
COL4A5-208ENST00000505728 PLAC4Q8WY50 150 aa3.5□□□□□ -1.85
COL4A5-208ENST00000505728 PRAC1Q96KF2 57 aa3.5□□□□□ -1.85
COL4A5-208ENST00000505728 CAMK2N1Q7Z7J9 78 aa3.49□□□□□ -1.85
COL4A5-208ENST00000505728 C10orf95Q9H7T3 257 aa3.46□□□□□ -1.86
COL4A5-208ENST00000505728 KRTAP25-1Q3LHN0 102 aa3.44□□□□□ -1.86
COL4A5-208ENST00000505728 MT1BP07438 61 aa3.41□□□□□ -1.86
COL4A5-208ENST00000505728 KRTAP19-6Q3LI70 58 aa3.41□□□□□ -1.86
COL4A5-208ENST00000505728 KRTAP5-3Q6L8H2 238 aa3.4□□□□□ -1.87
COL4A5-208ENST00000505728 TNP1P09430 55 aa3.36□□□□□ -1.87
COL4A5-208ENST00000505728 KRTAP6-3Q3LI67 103 aa3.34□□□□□ -1.87
COL4A5-208ENST00000505728 KRTAP23-1A1A580 65 aa3.32□□□□□ -1.88
COL4A5-208ENST00000505728 PP632Q6XCG6 107 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 156.1 ms