RNA–Protein interactions for RNA: ENST00000504110.1

C4orf3-202, Transcript of chromosome 4 open reading frame 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C4orf3, Length 667 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf3-202ENST00000504110 LCA10Q71F78 164 aa7.59□□□□□ -1.19
C4orf3-202ENST00000504110 SPANXA2-OT1Q8N9U9 137 aa7.56□□□□□ -1.2
C4orf3-202ENST00000504110 NDUFC1O43677 76 aa7.55□□□□□ -1.2
C4orf3-202ENST00000504110 CSAG1Q6PB30 78 aa7.53□□□□□ -1.2
C4orf3-202ENST00000504110 KRTAP9-8Q9BYQ0 159 aa7.53□□□□□ -1.2
C4orf3-202ENST00000504110 ACYP2P14621 99 aa7.52□□□□□ -1.21
C4orf3-202ENST00000504110 KRTAP3-3Q9BYR6 98 aa7.52□□□□□ -1.21
C4orf3-202ENST00000504110 CYSTM1Q9H1C7 97 aa7.49□□□□□ -1.21
C4orf3-202ENST00000504110 CCDC179H3BU77 68 aa7.48□□□□□ -1.21
C4orf3-202ENST00000504110 H7BZZ5 65 aa7.48□□□□□ -1.21
C4orf3-202ENST00000504110 MT2AP02795 61 aa7.46□□□□□ -1.22
C4orf3-202ENST00000504110 MT1FP04733 61 aa7.4□□□□□ -1.22
C4orf3-202ENST00000504110 KRTAP10-10P60014 251 aa7.39□□□□□ -1.23
C4orf3-202ENST00000504110 CHKB-CPT1BH3BT56 60 aa7.37□□□□□ -1.23
C4orf3-202ENST00000504110 SPTSSBQ8NFR3 76 aa7.34□□□□□ -1.23
C4orf3-202ENST00000504110 H0YAA0 97 aa7.32□□□□□ -1.24
C4orf3-202ENST00000504110 COA5Q86WW8 74 aa7.31□□□□□ -1.24
C4orf3-202ENST00000504110 ATP5EP56381 51 aaPredicted RBP7.29□□□□□ -1.24
C4orf3-202ENST00000504110 KRTAP9-3Q9BYQ3 159 aa7.28□□□□□ -1.24
C4orf3-202ENST00000504110 TMEM258P61165 79 aa7.25□□□□□ -1.25
C4orf3-202ENST00000504110 ADM2Q7Z4H4 148 aa7.23□□□□□ -1.25
C4orf3-202ENST00000504110 PCP4P48539 62 aa7.18□□□□□ -1.26
C4orf3-202ENST00000504110 CRIPTQ9P021 101 aa7.17□□□□□ -1.26
C4orf3-202ENST00000504110 LCE2BO14633 110 aa7.14□□□□□ -1.27
C4orf3-202ENST00000504110 KRTAP3-2Q9BYR7 98 aa7.14□□□□□ -1.27
C4orf3-202ENST00000504110 KRTAP9-7A8MTY7 169 aa7.12□□□□□ -1.27
C4orf3-202ENST00000504110 P0C880 135 aa7.12□□□□□ -1.27
C4orf3-202ENST00000504110 KRTAP19-1Q8IUB9 90 aa7.11□□□□□ -1.27
C4orf3-202ENST00000504110 SPRR2GQ9BYE4 73 aa7.11□□□□□ -1.27
C4orf3-202ENST00000504110 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.08□□□□□ -1.28
C4orf3-202ENST00000504110 SEC61GP60059 68 aa7.03□□□□□ -1.28
C4orf3-202ENST00000504110 SERP1Q9Y6X1 66 aa7.02□□□□□ -1.29
C4orf3-202ENST00000504110 R4GN34 69 aa7.02□□□□□ -1.29
C4orf3-202ENST00000504110 KRTAP19-8Q3LI54 63 aa7□□□□□ -1.29
C4orf3-202ENST00000504110 M0QZ58 72 aa6.99□□□□□ -1.29
C4orf3-202ENST00000504110 Q5VV11 94 aa6.96□□□□□ -1.3
C4orf3-202ENST00000504110 USH2AO75445 5202 aa6.95□□□□□ -1.3
C4orf3-202ENST00000504110 A0A1B0GU69 56 aa6.94□□□□□ -1.3
C4orf3-202ENST00000504110 MT1BP07438 61 aa6.92□□□□□ -1.3
C4orf3-202ENST00000504110 LINC01558Q9Y6Z2 57 aa6.9□□□□□ -1.3
C4orf3-202ENST00000504110 SSPOA2VEC9 5147 aa6.88□□□□□ -1.31
C4orf3-202ENST00000504110 PRR15LQ9BU68 103 aa6.87□□□□□ -1.31
C4orf3-202ENST00000504110 A0A1B0GU33 70 aa6.86□□□□□ -1.31
C4orf3-202ENST00000504110 LINC01554Q52M75 96 aa6.84□□□□□ -1.31
C4orf3-202ENST00000504110 KRTAP19-6Q3LI70 58 aa6.83□□□□□ -1.32
C4orf3-202ENST00000504110 KRTAP13-4Q3LI77 160 aa6.83□□□□□ -1.32
C4orf3-202ENST00000504110 RPS28P62857 69 aaKnown RBP6.81□□□□□ -1.32
C4orf3-202ENST00000504110 FCGBPQ9Y6R7 5405 aaPredicted RBP6.8□□□□□ -1.32
C4orf3-202ENST00000504110 PLAC4Q8WY50 150 aa6.79□□□□□ -1.32
C4orf3-202ENST00000504110 V9GYY9 64 aa6.79□□□□□ -1.32
C4orf3-202ENST00000504110 SMIM26A0A096LP01 95 aa6.78□□□□□ -1.32
C4orf3-202ENST00000504110 A6NN06 94 aa6.75□□□□□ -1.33
C4orf3-202ENST00000504110 Q1T7F1 81 aa6.75□□□□□ -1.33
C4orf3-202ENST00000504110 SPATA8Q6RVD6 105 aa6.75□□□□□ -1.33
C4orf3-202ENST00000504110 SYNE2Q8WXH0 6885 aaKnown RBP6.72□□□□□ -1.33
C4orf3-202ENST00000504110 MACF1Q9UPN3 7388 aaKnown RBP6.71□□□□□ -1.34
C4orf3-202ENST00000504110 KRTAP10-5P60370 271 aa6.68□□□□□ -1.34
C4orf3-202ENST00000504110 A0A0D9SG42 100 aa6.66□□□□□ -1.34
C4orf3-202ENST00000504110 UQCR11O14957 56 aa6.65□□□□□ -1.34
C4orf3-202ENST00000504110 PSPHP1O15172 72 aa6.64□□□□□ -1.35
C4orf3-202ENST00000504110 PRO2289Q9P1D8 64 aa6.61□□□□□ -1.35
C4orf3-202ENST00000504110 A8MU10 97 aa6.59□□□□□ -1.35
C4orf3-202ENST00000504110 MT1XP80297 61 aa6.59□□□□□ -1.35
C4orf3-202ENST00000504110 SPINT4Q6UDR6 99 aa6.57□□□□□ -1.36
C4orf3-202ENST00000504110 KRTAP12-1P59990 96 aa6.56□□□□□ -1.36
C4orf3-202ENST00000504110 MIR22HGQ0VDD5 57 aa6.53□□□□□ -1.36
C4orf3-202ENST00000504110 CAMK2N1Q7Z7J9 78 aa6.53□□□□□ -1.36
C4orf3-202ENST00000504110 KRTAP12-2P59991 146 aa6.51□□□□□ -1.37
C4orf3-202ENST00000504110 KRTAP6-3Q3LI67 103 aa6.51□□□□□ -1.37
C4orf3-202ENST00000504110 A6NED7 52 aa6.45□□□□□ -1.38
C4orf3-202ENST00000504110 K7ERS5 55 aa6.34□□□□□ -1.39
C4orf3-202ENST00000504110 NEBP20929 6669 aa6.34□□□□□ -1.39
C4orf3-202ENST00000504110 KRTAP10-7P60409 375 aaPredicted RBP6.3□□□□□ -1.4
C4orf3-202ENST00000504110 CDC42SE1Q9NRR8 79 aa6.28□□□□□ -1.4
C4orf3-202ENST00000504110 KRTAP10-12P60413 245 aa6.27□□□□□ -1.41
C4orf3-202ENST00000504110 C10orf95Q9H7T3 257 aa6.23□□□□□ -1.41
C4orf3-202ENST00000504110 KRTAP20-1Q3LI63 56 aa6.22□□□□□ -1.41
C4orf3-202ENST00000504110 KRTAP4-8A0A0G2JLE6 195 aa6.17□□□□□ -1.42
C4orf3-202ENST00000504110 KRTAP4-8Q9BYQ9 185 aa6.17□□□□□ -1.42
C4orf3-202ENST00000504110 MUC12Q9UKN1 5478 aa6.16□□□□□ -1.42
C4orf3-202ENST00000504110 TNP1P09430 55 aa6.15□□□□□ -1.42
C4orf3-202ENST00000504110 KRTAP8-1Q8IUC2 63 aa6.14□□□□□ -1.43
C4orf3-202ENST00000504110 KRTAP5-9P26371 169 aa6.1□□□□□ -1.43
C4orf3-202ENST00000504110 KMT2DO14686 5537 aa6.06□□□□□ -1.44
C4orf3-202ENST00000504110 BRK1Q8WUW1 75 aa6.05□□□□□ -1.44
C4orf3-202ENST00000504110 KRTAP25-1Q3LHN0 102 aa6.02□□□□□ -1.45
C4orf3-202ENST00000504110 SPRR2FQ96RM1 72 aa6.01□□□□□ -1.45
C4orf3-202ENST00000504110 ROMO1P60602 79 aa5.97□□□□□ -1.45
C4orf3-202ENST00000504110 KRTAP2-3P0C7H8 128 aa5.96□□□□□ -1.46
C4orf3-202ENST00000504110 KRTAP2-4Q9BYR9 128 aa5.96□□□□□ -1.46
C4orf3-202ENST00000504110 MDN1Q9NU22 5596 aa5.95□□□□□ -1.46
C4orf3-202ENST00000504110 LCE3AQ5TA76 89 aa5.94□□□□□ -1.46
C4orf3-202ENST00000504110 KRTAP19-7Q3SYF9 63 aa5.89□□□□□ -1.47
C4orf3-202ENST00000504110 SVIPQ8NHG7 77 aa5.89□□□□□ -1.47
C4orf3-202ENST00000504110 KRTAP19-5Q3LI72 72 aa5.85□□□□□ -1.47
C4orf3-202ENST00000504110 KRTAP23-1A1A580 65 aa5.83□□□□□ -1.48
C4orf3-202ENST00000504110 MT1EP04732 61 aa5.82□□□□□ -1.48
C4orf3-202ENST00000504110 SPRR2EP22531 72 aa5.82□□□□□ -1.48
C4orf3-202ENST00000504110 SPRR2BP35325 72 aa5.82□□□□□ -1.48
C4orf3-202ENST00000504110 SPRR2AP35326 72 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 126.2 ms