RNA–Protein interactions for RNA: ENST00000497564.5

VPS26A-209, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 462 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-209ENST00000497564 C4orf26Q17RF5 130 aa7.23□□□□□ -1.25
VPS26A-209ENST00000497564 COX6B2Q6YFQ2 88 aa7.22□□□□□ -1.25
VPS26A-209ENST00000497564 DMAC1Q96GE9 116 aa7.21□□□□□ -1.26
VPS26A-209ENST00000497564 A8MUN3 132 aa7.2□□□□□ -1.26
VPS26A-209ENST00000497564 RBM12B-AS1Q9P1G2 102 aa7.18□□□□□ -1.26
VPS26A-209ENST00000497564 KRTAP3-1Q9BYR8 98 aa7.17□□□□□ -1.26
VPS26A-209ENST00000497564 ACYP2P14621 99 aa7.14□□□□□ -1.27
VPS26A-209ENST00000497564 FLGP20930 4061 aaPredicted RBP7.13□□□□□ -1.27
VPS26A-209ENST00000497564 MT1HP80294 61 aa7.11□□□□□ -1.27
VPS26A-209ENST00000497564 H1FX-AS1Q4G0G2 97 aa7.08□□□□□ -1.28
VPS26A-209ENST00000497564 COA5Q86WW8 74 aa7.06□□□□□ -1.28
VPS26A-209ENST00000497564 SERP1Q9Y6X1 66 aa7.06□□□□□ -1.28
VPS26A-209ENST00000497564 RPS28P62857 69 aaKnown RBP7.01□□□□□ -1.29
VPS26A-209ENST00000497564 FSIP2Q5CZC0 6907 aa6.98□□□□□ -1.29
VPS26A-209ENST00000497564 CHKB-CPT1BH3BT56 60 aa6.98□□□□□ -1.29
VPS26A-209ENST00000497564 S4R3F8 94 aa6.98□□□□□ -1.29
VPS26A-209ENST00000497564 KRTAP10-6P60371 365 aaPredicted RBP6.96□□□□□ -1.3
VPS26A-209ENST00000497564 LCA10Q71F78 164 aa6.95□□□□□ -1.3
VPS26A-209ENST00000497564 KRTAP4-8Q9BYQ9 185 aa6.95□□□□□ -1.3
VPS26A-209ENST00000497564 M0R2T5 61 aa6.93□□□□□ -1.3
VPS26A-209ENST00000497564 CRCT1Q9UGL9 99 aa6.93□□□□□ -1.3
VPS26A-209ENST00000497564 SPTSSBQ8NFR3 76 aa6.92□□□□□ -1.3
VPS26A-209ENST00000497564 SMIM26A0A096LP01 95 aa6.86□□□□□ -1.31
VPS26A-209ENST00000497564 CSAG1Q6PB30 78 aa6.85□□□□□ -1.31
VPS26A-209ENST00000497564 KRTAP9-7A8MTY7 169 aa6.83□□□□□ -1.32
VPS26A-209ENST00000497564 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.83□□□□□ -1.32
VPS26A-209ENST00000497564 Q1T7F1 81 aa6.77□□□□□ -1.33
VPS26A-209ENST00000497564 LINC01558Q9Y6Z2 57 aa6.77□□□□□ -1.33
VPS26A-209ENST00000497564 V9GYY9 64 aa6.77□□□□□ -1.33
VPS26A-209ENST00000497564 KRTAP9-8Q9BYQ0 159 aa6.75□□□□□ -1.33
VPS26A-209ENST00000497564 H0YAA0 97 aa6.73□□□□□ -1.33
VPS26A-209ENST00000497564 KRTAP4-12Q9BQ66 201 aa6.68□□□□□ -1.34
VPS26A-209ENST00000497564 USH2AO75445 5202 aa6.68□□□□□ -1.34
VPS26A-209ENST00000497564 A0A1B0GU69 56 aa6.67□□□□□ -1.34
VPS26A-209ENST00000497564 SEC61GP60059 68 aa6.67□□□□□ -1.34
VPS26A-209ENST00000497564 MT2AP02795 61 aa6.66□□□□□ -1.34
VPS26A-209ENST00000497564 PRR15LQ9BU68 103 aa6.66□□□□□ -1.34
VPS26A-209ENST00000497564 ADM2Q7Z4H4 148 aa6.64□□□□□ -1.35
VPS26A-209ENST00000497564 LCE3BQ5TA77 95 aa6.63□□□□□ -1.35
VPS26A-209ENST00000497564 SSPOA2VEC9 5147 aa6.62□□□□□ -1.35
VPS26A-209ENST00000497564 MT1FP04733 61 aa6.62□□□□□ -1.35
VPS26A-209ENST00000497564 PSPHP1O15172 72 aa6.58□□□□□ -1.36
VPS26A-209ENST00000497564 P0C880 135 aa6.58□□□□□ -1.36
VPS26A-209ENST00000497564 Q5VV11 94 aa6.58□□□□□ -1.36
VPS26A-209ENST00000497564 KRTAP19-1Q8IUB9 90 aa6.58□□□□□ -1.36
VPS26A-209ENST00000497564 KRTAP10-10P60014 251 aa6.54□□□□□ -1.36
VPS26A-209ENST00000497564 KRTAP9-3Q9BYQ3 159 aa6.53□□□□□ -1.36
VPS26A-209ENST00000497564 A0A1B0GU33 70 aa6.51□□□□□ -1.37
VPS26A-209ENST00000497564 KRTAP9-9Q9BYP9 154 aa6.5□□□□□ -1.37
VPS26A-209ENST00000497564 KRTAP9-4Q9BYQ2 154 aa6.5□□□□□ -1.37
VPS26A-209ENST00000497564 CRIPTQ9P021 101 aa6.49□□□□□ -1.37
VPS26A-209ENST00000497564 M0QZ58 72 aa6.46□□□□□ -1.38
VPS26A-209ENST00000497564 UQCR11O14957 56 aa6.46□□□□□ -1.38
VPS26A-209ENST00000497564 FCGBPQ9Y6R7 5405 aaPredicted RBP6.43□□□□□ -1.38
VPS26A-209ENST00000497564 A6NED7 52 aa6.41□□□□□ -1.38
VPS26A-209ENST00000497564 KRTAP13-4Q3LI77 160 aa6.41□□□□□ -1.38
VPS26A-209ENST00000497564 R4GN34 69 aa6.41□□□□□ -1.38
VPS26A-209ENST00000497564 KRTAP4-8A0A0G2JLE6 195 aa6.38□□□□□ -1.39
VPS26A-209ENST00000497564 SPATA8Q6RVD6 105 aa6.37□□□□□ -1.39
VPS26A-209ENST00000497564 SPRR2GQ9BYE4 73 aa6.37□□□□□ -1.39
VPS26A-209ENST00000497564 MIR22HGQ0VDD5 57 aa6.36□□□□□ -1.39
VPS26A-209ENST00000497564 CDC42SE1Q9NRR8 79 aa6.31□□□□□ -1.4
VPS26A-209ENST00000497564 A8MU10 97 aa6.27□□□□□ -1.41
VPS26A-209ENST00000497564 A6NN06 94 aa6.25□□□□□ -1.41
VPS26A-209ENST00000497564 A0A0D9SG42 100 aa6.24□□□□□ -1.41
VPS26A-209ENST00000497564 LINC01554Q52M75 96 aa6.24□□□□□ -1.41
VPS26A-209ENST00000497564 KRTAP19-8Q3LI54 63 aa6.23□□□□□ -1.41
VPS26A-209ENST00000497564 KRTAP19-6Q3LI70 58 aa6.23□□□□□ -1.41
VPS26A-209ENST00000497564 BRK1Q8WUW1 75 aa6.22□□□□□ -1.41
VPS26A-209ENST00000497564 LCE1DQ5T752 114 aa6.2□□□□□ -1.42
VPS26A-209ENST00000497564 KRTAP12-1P59990 96 aa6.18□□□□□ -1.42
VPS26A-209ENST00000497564 MACF1Q9UPN3 7388 aaKnown RBP6.16□□□□□ -1.42
VPS26A-209ENST00000497564 KRTAP4-7Q9BYR0 210 aa6.15□□□□□ -1.42
VPS26A-209ENST00000497564 KRTAP12-2P59991 146 aa6.14□□□□□ -1.43
VPS26A-209ENST00000497564 MT1BP07438 61 aa6.13□□□□□ -1.43
VPS26A-209ENST00000497564 K7ERS5 55 aa6.11□□□□□ -1.43
VPS26A-209ENST00000497564 SPINT4Q6UDR6 99 aa6.11□□□□□ -1.43
VPS26A-209ENST00000497564 PLAC4Q8WY50 150 aa6.09□□□□□ -1.43
VPS26A-209ENST00000497564 SYNE2Q8WXH0 6885 aaKnown RBP6.08□□□□□ -1.44
VPS26A-209ENST00000497564 PRO0628Q9UI54 55 aa6.06□□□□□ -1.44
VPS26A-209ENST00000497564 LCE4AQ5TA78 99 aa6.05□□□□□ -1.44
VPS26A-209ENST00000497564 KRTAP4-9Q9BYQ8 210 aa6.03□□□□□ -1.44
VPS26A-209ENST00000497564 CAMK2N1Q7Z7J9 78 aa5.98□□□□□ -1.45
VPS26A-209ENST00000497564 KRTAP19-4Q3LI73 84 aa5.95□□□□□ -1.46
VPS26A-209ENST00000497564 H3BS24 57 aa5.93□□□□□ -1.46
VPS26A-209ENST00000497564 NEBP20929 6669 aa5.92□□□□□ -1.46
VPS26A-209ENST00000497564 KRTAP10-5P60370 271 aa5.9□□□□□ -1.46
VPS26A-209ENST00000497564 MT1XP80297 61 aa5.9□□□□□ -1.46
VPS26A-209ENST00000497564 PMAIP1Q13794 54 aa5.89□□□□□ -1.47
VPS26A-209ENST00000497564 KRTAP4-2Q9BYR5 136 aa5.89□□□□□ -1.47
VPS26A-209ENST00000497564 KRTAP6-3Q3LI67 103 aa5.88□□□□□ -1.47
VPS26A-209ENST00000497564 PRO2289Q9P1D8 64 aa5.86□□□□□ -1.47
VPS26A-209ENST00000497564 C10orf95Q9H7T3 257 aa5.85□□□□□ -1.47
VPS26A-209ENST00000497564 ROMO1P60602 79 aa5.84□□□□□ -1.47
VPS26A-209ENST00000497564 KRTAP20-1Q3LI63 56 aa5.83□□□□□ -1.48
VPS26A-209ENST00000497564 KRTAP4-11Q9BYQ6 195 aa5.82□□□□□ -1.48
VPS26A-209ENST00000497564 MUC12Q9UKN1 5478 aa5.81□□□□□ -1.48
VPS26A-209ENST00000497564 LCE5AQ5TCM9 118 aa5.74□□□□□ -1.49
VPS26A-209ENST00000497564 KMT2DO14686 5537 aa5.74□□□□□ -1.49
VPS26A-209ENST00000497564 KRTAP25-1Q3LHN0 102 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms