RNA–Protein interactions for RNA: ENST00000491134.5

PRDM2-209, Transcript of PR/SET domain 2, humanhuman

TSL 3

Gene PRDM2, Length 1,100 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM2-209ENST00000491134 LCA10Q71F78 164 aa8.75□□□□□ -1.01
PRDM2-209ENST00000491134 KRTAP9-8Q9BYQ0 159 aa8.75□□□□□ -1.01
PRDM2-209ENST00000491134 CYSTM1Q9H1C7 97 aa8.72□□□□□ -1.01
PRDM2-209ENST00000491134 SPANXA2-OT1Q8N9U9 137 aa8.69□□□□□ -1.02
PRDM2-209ENST00000491134 MT2AP02795 61 aa8.66□□□□□ -1.02
PRDM2-209ENST00000491134 CCDC179H3BU77 68 aa8.64□□□□□ -1.03
PRDM2-209ENST00000491134 H7BZZ5 65 aa8.64□□□□□ -1.03
PRDM2-209ENST00000491134 NDUFC1O43677 76 aa8.63□□□□□ -1.03
PRDM2-209ENST00000491134 CSAG1Q6PB30 78 aa8.63□□□□□ -1.03
PRDM2-209ENST00000491134 MT1FP04733 61 aa8.59□□□□□ -1.03
PRDM2-209ENST00000491134 ACYP2P14621 99 aa8.58□□□□□ -1.04
PRDM2-209ENST00000491134 LOC100996750A0A140TA64 210 aa8.55□□□□□ -1.04
PRDM2-209ENST00000491134 KRTAP4-6Q9BYQ5 205 aa8.55□□□□□ -1.04
PRDM2-209ENST00000491134 KRTAP10-10P60014 251 aa8.49□□□□□ -1.05
PRDM2-209ENST00000491134 KRTAP9-3Q9BYQ3 159 aa8.46□□□□□ -1.06
PRDM2-209ENST00000491134 H0YAA0 97 aa8.43□□□□□ -1.06
PRDM2-209ENST00000491134 KRTAP9-2Q9BYQ4 174 aa8.42□□□□□ -1.06
PRDM2-209ENST00000491134 COA5Q86WW8 74 aa8.4□□□□□ -1.06
PRDM2-209ENST00000491134 CHKB-CPT1BH3BT56 60 aa8.37□□□□□ -1.07
PRDM2-209ENST00000491134 SPTSSBQ8NFR3 76 aa8.34□□□□□ -1.07
PRDM2-209ENST00000491134 ATP5EP56381 51 aaPredicted RBP8.32□□□□□ -1.08
PRDM2-209ENST00000491134 TMEM258P61165 79 aa8.31□□□□□ -1.08
PRDM2-209ENST00000491134 ADM2Q7Z4H4 148 aa8.3□□□□□ -1.08
PRDM2-209ENST00000491134 KRTAP19-1Q8IUB9 90 aa8.28□□□□□ -1.08
PRDM2-209ENST00000491134 PCP4P48539 62 aa8.25□□□□□ -1.09
PRDM2-209ENST00000491134 USH2AO75445 5202 aa8.25□□□□□ -1.09
PRDM2-209ENST00000491134 P0C880 135 aa8.24□□□□□ -1.09
PRDM2-209ENST00000491134 SPRR2GQ9BYE4 73 aa8.23□□□□□ -1.09
PRDM2-209ENST00000491134 CRIPTQ9P021 101 aa8.22□□□□□ -1.09
PRDM2-209ENST00000491134 KRTAP19-8Q3LI54 63 aa8.12□□□□□ -1.11
PRDM2-209ENST00000491134 FSIP2Q5CZC0 6907 aa8.09□□□□□ -1.11
PRDM2-209ENST00000491134 SSPOA2VEC9 5147 aa8.08□□□□□ -1.12
PRDM2-209ENST00000491134 SERP1Q9Y6X1 66 aa8.06□□□□□ -1.12
PRDM2-209ENST00000491134 MT1BP07438 61 aa8.05□□□□□ -1.12
PRDM2-209ENST00000491134 CRCT1Q9UGL9 99 aa8.03□□□□□ -1.12
PRDM2-209ENST00000491134 R4GN34 69 aa8.03□□□□□ -1.12
PRDM2-209ENST00000491134 M0QZ58 72 aa8□□□□□ -1.13
PRDM2-209ENST00000491134 Q5VV11 94 aa7.97□□□□□ -1.13
PRDM2-209ENST00000491134 SEC61GP60059 68 aa7.96□□□□□ -1.14
PRDM2-209ENST00000491134 KRTAP9-6A0A140TA67 174 aa7.94□□□□□ -1.14
PRDM2-209ENST00000491134 LINC01558Q9Y6Z2 57 aa7.94□□□□□ -1.14
PRDM2-209ENST00000491134 KRTAP13-4Q3LI77 160 aa7.93□□□□□ -1.14
PRDM2-209ENST00000491134 KRTAP19-6Q3LI70 58 aa7.92□□□□□ -1.14
PRDM2-209ENST00000491134 A0A1B0GU69 56 aa7.91□□□□□ -1.14
PRDM2-209ENST00000491134 KRTAP4-8Q9BYQ9 185 aa7.91□□□□□ -1.14
PRDM2-209ENST00000491134 A0A1B0GU33 70 aa7.85□□□□□ -1.15
PRDM2-209ENST00000491134 RPS28P62857 69 aaKnown RBP7.84□□□□□ -1.15
PRDM2-209ENST00000491134 LINC01554Q52M75 96 aa7.82□□□□□ -1.16
PRDM2-209ENST00000491134 FCGBPQ9Y6R7 5405 aaPredicted RBP7.81□□□□□ -1.16
PRDM2-209ENST00000491134 PRR15LQ9BU68 103 aa7.79□□□□□ -1.16
PRDM2-209ENST00000491134 A6NN06 94 aa7.77□□□□□ -1.17
PRDM2-209ENST00000491134 Q1T7F1 81 aa7.77□□□□□ -1.17
PRDM2-209ENST00000491134 SPATA8Q6RVD6 105 aa7.77□□□□□ -1.17
PRDM2-209ENST00000491134 SMIM26A0A096LP01 95 aa7.76□□□□□ -1.17
PRDM2-209ENST00000491134 KRTAP10-5P60370 271 aa7.73□□□□□ -1.17
PRDM2-209ENST00000491134 PLAC4Q8WY50 150 aa7.73□□□□□ -1.17
PRDM2-209ENST00000491134 V9GYY9 64 aa7.72□□□□□ -1.17
PRDM2-209ENST00000491134 H3BS24 57 aa7.71□□□□□ -1.18
PRDM2-209ENST00000491134 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.7□□□□□ -1.18
PRDM2-209ENST00000491134 MT1XP80297 61 aa7.66□□□□□ -1.18
PRDM2-209ENST00000491134 A0A0D9SG42 100 aa7.63□□□□□ -1.19
PRDM2-209ENST00000491134 LCE3BQ5TA77 95 aa7.62□□□□□ -1.19
PRDM2-209ENST00000491134 PSPHP1O15172 72 aa7.61□□□□□ -1.19
PRDM2-209ENST00000491134 KRTAP4-12Q9BQ66 201 aa7.61□□□□□ -1.19
PRDM2-209ENST00000491134 A8MU10 97 aa7.6□□□□□ -1.19
PRDM2-209ENST00000491134 UQCR11O14957 56 aa7.59□□□□□ -1.19
PRDM2-209ENST00000491134 KRTAP12-1P59990 96 aa7.59□□□□□ -1.19
PRDM2-209ENST00000491134 PRO2289Q9P1D8 64 aa7.54□□□□□ -1.2
PRDM2-209ENST00000491134 KRTAP12-2P59991 146 aa7.53□□□□□ -1.2
PRDM2-209ENST00000491134 SPINT4Q6UDR6 99 aa7.48□□□□□ -1.21
PRDM2-209ENST00000491134 MIR22HGQ0VDD5 57 aa7.46□□□□□ -1.22
PRDM2-209ENST00000491134 CAMK2N1Q7Z7J9 78 aa7.43□□□□□ -1.22
PRDM2-209ENST00000491134 MACF1Q9UPN3 7388 aaKnown RBP7.39□□□□□ -1.23
PRDM2-209ENST00000491134 A6NED7 52 aa7.35□□□□□ -1.23
PRDM2-209ENST00000491134 KRTAP9-9Q9BYP9 154 aa7.34□□□□□ -1.23
PRDM2-209ENST00000491134 KRTAP9-4Q9BYQ2 154 aa7.34□□□□□ -1.23
PRDM2-209ENST00000491134 KRTAP10-7P60409 375 aaPredicted RBP7.31□□□□□ -1.24
PRDM2-209ENST00000491134 KRTAP10-12P60413 245 aa7.28□□□□□ -1.24
PRDM2-209ENST00000491134 KRTAP19-4Q3LI73 84 aa7.27□□□□□ -1.25
PRDM2-209ENST00000491134 KRTAP4-8A0A0G2JLE6 195 aa7.24□□□□□ -1.25
PRDM2-209ENST00000491134 KMT2DO14686 5537 aa7.22□□□□□ -1.25
PRDM2-209ENST00000491134 C10orf95Q9H7T3 257 aa7.22□□□□□ -1.25
PRDM2-209ENST00000491134 KRTAP9-7A8MTY7 169 aa7.2□□□□□ -1.26
PRDM2-209ENST00000491134 CDC42SE1Q9NRR8 79 aa7.2□□□□□ -1.26
PRDM2-209ENST00000491134 SYNE2Q8WXH0 6885 aaKnown RBP7.18□□□□□ -1.26
PRDM2-209ENST00000491134 KRTAP6-3Q3LI67 103 aa7.16□□□□□ -1.26
PRDM2-209ENST00000491134 K7ERS5 55 aa7.14□□□□□ -1.27
PRDM2-209ENST00000491134 LCE1DQ5T752 114 aa7.1□□□□□ -1.27
PRDM2-209ENST00000491134 KRTAP5-9P26371 169 aa7.08□□□□□ -1.28
PRDM2-209ENST00000491134 KRTAP8-1Q8IUC2 63 aa7.04□□□□□ -1.28
PRDM2-209ENST00000491134 TNP1P09430 55 aa7.01□□□□□ -1.29
PRDM2-209ENST00000491134 KRTAP4-7Q9BYR0 210 aa6.99□□□□□ -1.29
PRDM2-209ENST00000491134 LCE4AQ5TA78 99 aa6.93□□□□□ -1.3
PRDM2-209ENST00000491134 MUC12Q9UKN1 5478 aa6.92□□□□□ -1.3
PRDM2-209ENST00000491134 SPRR2FQ96RM1 72 aa6.91□□□□□ -1.3
PRDM2-209ENST00000491134 KRTAP25-1Q3LHN0 102 aa6.9□□□□□ -1.3
PRDM2-209ENST00000491134 BRK1Q8WUW1 75 aa6.89□□□□□ -1.31
PRDM2-209ENST00000491134 LCE3AQ5TA76 89 aa6.87□□□□□ -1.31
PRDM2-209ENST00000491134 KRTAP19-7Q3SYF9 63 aa6.85□□□□□ -1.31
PRDM2-209ENST00000491134 KRTAP4-9Q9BYQ8 210 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms