RNA–Protein interactions for RNA: ENST00000488325.5

HLA-DOB-209, Transcript of major histocompatibility complex, class II, DO beta, humanhuman

Gene HLA-DOB, Length 1,188 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOB-209ENST00000488325 FAM236CP0DP71 79 aa6.35□□□□□ -1.39
HLA-DOB-209ENST00000488325 MT1HP80294 61 aa6.35□□□□□ -1.39
HLA-DOB-209ENST00000488325 SPINK7P58062 85 aa6.33□□□□□ -1.4
HLA-DOB-209ENST00000488325 KRTAP10-6P60371 365 aaPredicted RBP6.33□□□□□ -1.4
HLA-DOB-209ENST00000488325 SEC61BP60468 96 aaKnown RBP6.33□□□□□ -1.4
HLA-DOB-209ENST00000488325 HRES1P13985 223 aa6.3□□□□□ -1.4
HLA-DOB-209ENST00000488325 SSPOA2VEC9 5147 aa6.3□□□□□ -1.4
HLA-DOB-209ENST00000488325 KRTAP19-2Q3LHN2 52 aa6.27□□□□□ -1.41
HLA-DOB-209ENST00000488325 FCGBPQ9Y6R7 5405 aaPredicted RBP6.24□□□□□ -1.41
HLA-DOB-209ENST00000488325 USH2AO75445 5202 aa6.24□□□□□ -1.41
HLA-DOB-209ENST00000488325 DMAC1Q96GE9 116 aa6.22□□□□□ -1.41
HLA-DOB-209ENST00000488325 KRTAP4-12Q9BQ66 201 aa6.22□□□□□ -1.41
HLA-DOB-209ENST00000488325 SERP1Q9Y6X1 66 aa6.22□□□□□ -1.41
HLA-DOB-209ENST00000488325 A8MUN3 132 aa6.21□□□□□ -1.42
HLA-DOB-209ENST00000488325 ACYP2P14621 99 aa6.21□□□□□ -1.42
HLA-DOB-209ENST00000488325 SYNE2Q8WXH0 6885 aaKnown RBP6.2□□□□□ -1.42
HLA-DOB-209ENST00000488325 C4orf26Q17RF5 130 aa6.2□□□□□ -1.42
HLA-DOB-209ENST00000488325 MACF1Q9UPN3 7388 aaKnown RBP6.19□□□□□ -1.42
HLA-DOB-209ENST00000488325 COX6B2Q6YFQ2 88 aa6.18□□□□□ -1.42
HLA-DOB-209ENST00000488325 M0R2T5 61 aa6.17□□□□□ -1.42
HLA-DOB-209ENST00000488325 RPS28P62857 69 aaKnown RBP6.16□□□□□ -1.42
HLA-DOB-209ENST00000488325 KRTAP19-1Q8IUB9 90 aa6.16□□□□□ -1.42
HLA-DOB-209ENST00000488325 RBM12B-AS1Q9P1G2 102 aa6.15□□□□□ -1.42
HLA-DOB-209ENST00000488325 COA5Q86WW8 74 aa6.14□□□□□ -1.43
HLA-DOB-209ENST00000488325 CHKB-CPT1BH3BT56 60 aa6.12□□□□□ -1.43
HLA-DOB-209ENST00000488325 LCE3BQ5TA77 95 aa6.12□□□□□ -1.43
HLA-DOB-209ENST00000488325 MPLKIPQ8TAP9 179 aa6.1□□□□□ -1.43
HLA-DOB-209ENST00000488325 KRTAP3-1Q9BYR8 98 aa6.08□□□□□ -1.44
HLA-DOB-209ENST00000488325 FLGP20930 4061 aaPredicted RBP6.06□□□□□ -1.44
HLA-DOB-209ENST00000488325 SMIM26A0A096LP01 95 aa6.05□□□□□ -1.44
HLA-DOB-209ENST00000488325 H1FX-AS1Q4G0G2 97 aa6.05□□□□□ -1.44
HLA-DOB-209ENST00000488325 SPTSSBQ8NFR3 76 aa6.04□□□□□ -1.44
HLA-DOB-209ENST00000488325 KRTAP9-9Q9BYP9 154 aa6.04□□□□□ -1.44
HLA-DOB-209ENST00000488325 KRTAP9-4Q9BYQ2 154 aa6.04□□□□□ -1.44
HLA-DOB-209ENST00000488325 S4R3F8 94 aa6□□□□□ -1.45
HLA-DOB-209ENST00000488325 V9GYY9 64 aa5.97□□□□□ -1.45
HLA-DOB-209ENST00000488325 KRTAP6-3Q3LI67 103 aa5.95□□□□□ -1.46
HLA-DOB-209ENST00000488325 LCA10Q71F78 164 aa5.93□□□□□ -1.46
HLA-DOB-209ENST00000488325 Q1T7F1 81 aa5.92□□□□□ -1.46
HLA-DOB-209ENST00000488325 NEBP20929 6669 aa5.91□□□□□ -1.46
HLA-DOB-209ENST00000488325 LINC01558Q9Y6Z2 57 aa5.9□□□□□ -1.46
HLA-DOB-209ENST00000488325 KRTAP9-8Q9BYQ0 159 aa5.89□□□□□ -1.47
HLA-DOB-209ENST00000488325 KRTAP4-8A0A0G2JLE6 195 aa5.88□□□□□ -1.47
HLA-DOB-209ENST00000488325 H3BS24 57 aa5.88□□□□□ -1.47
HLA-DOB-209ENST00000488325 CSAG1Q6PB30 78 aa5.88□□□□□ -1.47
HLA-DOB-209ENST00000488325 PRR15LQ9BU68 103 aa5.86□□□□□ -1.47
HLA-DOB-209ENST00000488325 SEC61GP60059 68 aa5.85□□□□□ -1.47
HLA-DOB-209ENST00000488325 KRTAP20-1Q3LI63 56 aa5.85□□□□□ -1.47
HLA-DOB-209ENST00000488325 A0A1B0GU69 56 aa5.83□□□□□ -1.48
HLA-DOB-209ENST00000488325 PSPHP1O15172 72 aa5.79□□□□□ -1.48
HLA-DOB-209ENST00000488325 KRTAP19-6Q3LI70 58 aa5.77□□□□□ -1.49
HLA-DOB-209ENST00000488325 MT2AP02795 61 aa5.75□□□□□ -1.49
HLA-DOB-209ENST00000488325 Q5VV11 94 aa5.75□□□□□ -1.49
HLA-DOB-209ENST00000488325 H0YAA0 97 aa5.74□□□□□ -1.49
HLA-DOB-209ENST00000488325 LCE4AQ5TA78 99 aa5.74□□□□□ -1.49
HLA-DOB-209ENST00000488325 LCE1DQ5T752 114 aa5.73□□□□□ -1.49
HLA-DOB-209ENST00000488325 KRTAP9-3Q9BYQ3 159 aa5.73□□□□□ -1.49
HLA-DOB-209ENST00000488325 MUC12Q9UKN1 5478 aa5.71□□□□□ -1.49
HLA-DOB-209ENST00000488325 MT1FP04733 61 aa5.7□□□□□ -1.5
HLA-DOB-209ENST00000488325 ADM2Q7Z4H4 148 aa5.7□□□□□ -1.5
HLA-DOB-209ENST00000488325 A0A1B0GU33 70 aa5.66□□□□□ -1.5
HLA-DOB-209ENST00000488325 A6NED7 52 aa5.66□□□□□ -1.5
HLA-DOB-209ENST00000488325 KRTAP4-7Q9BYR0 210 aa5.66□□□□□ -1.5
HLA-DOB-209ENST00000488325 UQCR11O14957 56 aa5.65□□□□□ -1.5
HLA-DOB-209ENST00000488325 KRTAP10-10P60014 251 aa5.64□□□□□ -1.51
HLA-DOB-209ENST00000488325 P0C880 135 aa5.63□□□□□ -1.51
HLA-DOB-209ENST00000488325 KRTAP19-4Q3LI73 84 aa5.59□□□□□ -1.51
HLA-DOB-209ENST00000488325 MIR22HGQ0VDD5 57 aa5.57□□□□□ -1.52
HLA-DOB-209ENST00000488325 M0QZ58 72 aa5.56□□□□□ -1.52
HLA-DOB-209ENST00000488325 KRTAP4-9Q9BYQ8 210 aa5.56□□□□□ -1.52
HLA-DOB-209ENST00000488325 SPATA8Q6RVD6 105 aa5.55□□□□□ -1.52
HLA-DOB-209ENST00000488325 CDC42SE1Q9NRR8 79 aa5.55□□□□□ -1.52
HLA-DOB-209ENST00000488325 BRK1Q8WUW1 75 aa5.54□□□□□ -1.52
HLA-DOB-209ENST00000488325 CRIPTQ9P021 101 aa5.53□□□□□ -1.52
HLA-DOB-209ENST00000488325 KMT2DO14686 5537 aa5.52□□□□□ -1.53
HLA-DOB-209ENST00000488325 R4GN34 69 aa5.52□□□□□ -1.53
HLA-DOB-209ENST00000488325 KRTAP2-3P0C7H8 128 aa5.5□□□□□ -1.53
HLA-DOB-209ENST00000488325 KRTAP2-4Q9BYR9 128 aa5.5□□□□□ -1.53
HLA-DOB-209ENST00000488325 KRTAP13-4Q3LI77 160 aa5.48□□□□□ -1.53
HLA-DOB-209ENST00000488325 MDN1Q9NU22 5596 aa5.47□□□□□ -1.53
HLA-DOB-209ENST00000488325 KRTAP4-2Q9BYR5 136 aa5.44□□□□□ -1.54
HLA-DOB-209ENST00000488325 A0A0D9SG42 100 aa5.42□□□□□ -1.54
HLA-DOB-209ENST00000488325 A8MU10 97 aa5.42□□□□□ -1.54
HLA-DOB-209ENST00000488325 K7ERS5 55 aa5.4□□□□□ -1.54
HLA-DOB-209ENST00000488325 PRO0628Q9UI54 55 aa5.4□□□□□ -1.54
HLA-DOB-209ENST00000488325 LINC01554Q52M75 96 aa5.39□□□□□ -1.55
HLA-DOB-209ENST00000488325 KRTAP4-11Q9BYQ6 195 aa5.39□□□□□ -1.55
HLA-DOB-209ENST00000488325 GPR98Q8WXG9 6306 aa5.38□□□□□ -1.55
HLA-DOB-209ENST00000488325 KRTAP5-9P26371 169 aa5.38□□□□□ -1.55
HLA-DOB-209ENST00000488325 SPRR2GQ9BYE4 73 aa5.37□□□□□ -1.55
HLA-DOB-209ENST00000488325 LCE5AQ5TCM9 118 aa5.36□□□□□ -1.55
HLA-DOB-209ENST00000488325 A6NN06 94 aa5.34□□□□□ -1.55
HLA-DOB-209ENST00000488325 SPINT4Q6UDR6 99 aa5.32□□□□□ -1.56
HLA-DOB-209ENST00000488325 KRTAP12-1P59990 96 aa5.31□□□□□ -1.56
HLA-DOB-209ENST00000488325 KRTAP2-2Q9BYT5 123 aa5.28□□□□□ -1.56
HLA-DOB-209ENST00000488325 KRTAP2-1Q9BYU5 128 aa5.28□□□□□ -1.56
HLA-DOB-209ENST00000488325 KRTAP12-2P59991 146 aa5.26□□□□□ -1.57
HLA-DOB-209ENST00000488325 PMAIP1Q13794 54 aa5.25□□□□□ -1.57
HLA-DOB-209ENST00000488325 KRTAP19-8Q3LI54 63 aa5.24□□□□□ -1.57
HLA-DOB-209ENST00000488325 PLAC4Q8WY50 150 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms