RNA–Protein interactions for RNA: ENST00000486229.5

NBPF3-212, Transcript of NBPF member 3, humanhuman

TSL 3

Gene NBPF3, Length 933 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NBPF3-212ENST00000486229 ANAPC13Q9BS18 74 aa11.08□□□□□ -0.64
NBPF3-212ENST00000486229 KRTAP9-1A8MXZ3 250 aaPredicted RBP11.07□□□□□ -0.64
NBPF3-212ENST00000486229 CSAG1Q6PB30 78 aa11.01□□□□□ -0.65
NBPF3-212ENST00000486229 DMAC1Q96GE9 116 aa11.01□□□□□ -0.65
NBPF3-212ENST00000486229 NDUFC1O43677 76 aa10.99□□□□□ -0.65
NBPF3-212ENST00000486229 LCA10Q71F78 164 aa10.98□□□□□ -0.65
NBPF3-212ENST00000486229 SPANXA2-OT1Q8N9U9 137 aa10.97□□□□□ -0.65
NBPF3-212ENST00000486229 SSPOA2VEC9 5147 aa10.94□□□□□ -0.66
NBPF3-212ENST00000486229 ACYP2P14621 99 aa10.94□□□□□ -0.66
NBPF3-212ENST00000486229 USH2AO75445 5202 aa10.88□□□□□ -0.67
NBPF3-212ENST00000486229 KRTAP9-8Q9BYQ0 159 aa10.87□□□□□ -0.67
NBPF3-212ENST00000486229 KRTAP3-3Q9BYR6 98 aa10.82□□□□□ -0.68
NBPF3-212ENST00000486229 MT2AP02795 61 aa10.79□□□□□ -0.68
NBPF3-212ENST00000486229 SPTSSBQ8NFR3 76 aa10.78□□□□□ -0.68
NBPF3-212ENST00000486229 CHKB-CPT1BH3BT56 60 aa10.77□□□□□ -0.69
NBPF3-212ENST00000486229 KRTAP10-10P60014 251 aa10.77□□□□□ -0.69
NBPF3-212ENST00000486229 H7BZZ5 65 aa10.76□□□□□ -0.69
NBPF3-212ENST00000486229 FCGBPQ9Y6R7 5405 aaPredicted RBP10.76□□□□□ -0.69
NBPF3-212ENST00000486229 CCDC179H3BU77 68 aa10.72□□□□□ -0.69
NBPF3-212ENST00000486229 MT1FP04733 61 aa10.68□□□□□ -0.7
NBPF3-212ENST00000486229 H0YAA0 97 aa10.66□□□□□ -0.7
NBPF3-212ENST00000486229 CYSTM1Q9H1C7 97 aa10.66□□□□□ -0.7
NBPF3-212ENST00000486229 ATP5EP56381 51 aaPredicted RBP10.62□□□□□ -0.71
NBPF3-212ENST00000486229 COA5Q86WW8 74 aa10.56□□□□□ -0.72
NBPF3-212ENST00000486229 CRIPTQ9P021 101 aa10.52□□□□□ -0.73
NBPF3-212ENST00000486229 KRTAP9-3Q9BYQ3 159 aa10.51□□□□□ -0.73
NBPF3-212ENST00000486229 TMEM258P61165 79 aa10.5□□□□□ -0.73
NBPF3-212ENST00000486229 ADM2Q7Z4H4 148 aa10.5□□□□□ -0.73
NBPF3-212ENST00000486229 SYNE2Q8WXH0 6885 aaKnown RBP10.47□□□□□ -0.73
NBPF3-212ENST00000486229 KRTAP19-1Q8IUB9 90 aa10.45□□□□□ -0.74
NBPF3-212ENST00000486229 MACF1Q9UPN3 7388 aaKnown RBP10.44□□□□□ -0.74
NBPF3-212ENST00000486229 LCE2BO14633 110 aa10.34□□□□□ -0.75
NBPF3-212ENST00000486229 SEC61GP60059 68 aa10.32□□□□□ -0.76
NBPF3-212ENST00000486229 SPRR2GQ9BYE4 73 aa10.31□□□□□ -0.76
NBPF3-212ENST00000486229 PCP4P48539 62 aa10.29□□□□□ -0.76
NBPF3-212ENST00000486229 R4GN34 69 aa10.27□□□□□ -0.77
NBPF3-212ENST00000486229 P0C880 135 aa10.26□□□□□ -0.77
NBPF3-212ENST00000486229 KRTAP3-2Q9BYR7 98 aa10.26□□□□□ -0.77
NBPF3-212ENST00000486229 SERP1Q9Y6X1 66 aa10.25□□□□□ -0.77
NBPF3-212ENST00000486229 M0QZ58 72 aa10.16□□□□□ -0.78
NBPF3-212ENST00000486229 Q5VV11 94 aa10.16□□□□□ -0.78
NBPF3-212ENST00000486229 KRTAP19-8Q3LI54 63 aa10.13□□□□□ -0.79
NBPF3-212ENST00000486229 KRTAP6-3Q3LI67 103 aa10.1□□□□□ -0.79
NBPF3-212ENST00000486229 KRTAP19-6Q3LI70 58 aa10.1□□□□□ -0.79
NBPF3-212ENST00000486229 A0A1B0GU69 56 aa10.09□□□□□ -0.79
NBPF3-212ENST00000486229 PRR15LQ9BU68 103 aa10.05□□□□□ -0.8
NBPF3-212ENST00000486229 MT1BP07438 61 aa9.97□□□□□ -0.81
NBPF3-212ENST00000486229 LINC01558Q9Y6Z2 57 aa9.97□□□□□ -0.81
NBPF3-212ENST00000486229 A0A1B0GU33 70 aa9.96□□□□□ -0.82
NBPF3-212ENST00000486229 LINC01554Q52M75 96 aa9.96□□□□□ -0.82
NBPF3-212ENST00000486229 PLAC4Q8WY50 150 aa9.95□□□□□ -0.82
NBPF3-212ENST00000486229 NEBP20929 6669 aa9.92□□□□□ -0.82
NBPF3-212ENST00000486229 V9GYY9 64 aa9.91□□□□□ -0.82
NBPF3-212ENST00000486229 RPS28P62857 69 aaKnown RBP9.85□□□□□ -0.83
NBPF3-212ENST00000486229 A6NN06 94 aa9.84□□□□□ -0.83
NBPF3-212ENST00000486229 MUC12Q9UKN1 5478 aa9.83□□□□□ -0.84
NBPF3-212ENST00000486229 SMIM26A0A096LP01 95 aa9.81□□□□□ -0.84
NBPF3-212ENST00000486229 KRTAP13-4Q3LI77 160 aa9.79□□□□□ -0.84
NBPF3-212ENST00000486229 Q1T7F1 81 aa9.75□□□□□ -0.85
NBPF3-212ENST00000486229 SPATA8Q6RVD6 105 aa9.73□□□□□ -0.85
NBPF3-212ENST00000486229 PRO2289Q9P1D8 64 aa9.73□□□□□ -0.85
NBPF3-212ENST00000486229 KRTAP10-5P60370 271 aa9.69□□□□□ -0.86
NBPF3-212ENST00000486229 UQCR11O14957 56 aa9.67□□□□□ -0.86
NBPF3-212ENST00000486229 A0A0D9SG42 100 aa9.66□□□□□ -0.86
NBPF3-212ENST00000486229 KRTAP20-1Q3LI63 56 aa9.66□□□□□ -0.86
NBPF3-212ENST00000486229 PSPHP1O15172 72 aa9.57□□□□□ -0.88
NBPF3-212ENST00000486229 CAMK2N1Q7Z7J9 78 aa9.55□□□□□ -0.88
NBPF3-212ENST00000486229 SPINT4Q6UDR6 99 aa9.53□□□□□ -0.88
NBPF3-212ENST00000486229 MT1XP80297 61 aa9.5□□□□□ -0.89
NBPF3-212ENST00000486229 MIR22HGQ0VDD5 57 aa9.47□□□□□ -0.89
NBPF3-212ENST00000486229 A8MU10 97 aa9.46□□□□□ -0.9
NBPF3-212ENST00000486229 KRTAP12-1P59990 96 aa9.45□□□□□ -0.9
NBPF3-212ENST00000486229 MDN1Q9NU22 5596 aa9.45□□□□□ -0.9
NBPF3-212ENST00000486229 KMT2DO14686 5537 aa9.41□□□□□ -0.9
NBPF3-212ENST00000486229 A6NED7 52 aa9.37□□□□□ -0.91
NBPF3-212ENST00000486229 KRTAP12-2P59991 146 aa9.37□□□□□ -0.91
NBPF3-212ENST00000486229 KRTAP5-9P26371 169 aa9.36□□□□□ -0.91
NBPF3-212ENST00000486229 K7ERS5 55 aa9.33□□□□□ -0.92
NBPF3-212ENST00000486229 KRTAP2-3P0C7H8 128 aa9.24□□□□□ -0.93
NBPF3-212ENST00000486229 KRTAP2-4Q9BYR9 128 aa9.24□□□□□ -0.93
NBPF3-212ENST00000486229 KRTAP10-12P60413 245 aa9.08□□□□□ -0.96
NBPF3-212ENST00000486229 CDC42SE1Q9NRR8 79 aa9.08□□□□□ -0.96
NBPF3-212ENST00000486229 KRTAP10-7P60409 375 aaPredicted RBP9.06□□□□□ -0.96
NBPF3-212ENST00000486229 TNP1P09430 55 aa8.98□□□□□ -0.97
NBPF3-212ENST00000486229 KRTAP8-1Q8IUC2 63 aa8.96□□□□□ -0.98
NBPF3-212ENST00000486229 C10orf95Q9H7T3 257 aa8.96□□□□□ -0.98
NBPF3-212ENST00000486229 KRTAP2-2Q9BYT5 123 aa8.9□□□□□ -0.98
NBPF3-212ENST00000486229 KRTAP2-1Q9BYU5 128 aa8.9□□□□□ -0.98
NBPF3-212ENST00000486229 KRTAP4-8A0A0G2JLE6 195 aa8.85□□□□□ -0.99
NBPF3-212ENST00000486229 KRTAP4-8Q9BYQ9 185 aa8.85□□□□□ -0.99
NBPF3-212ENST00000486229 SPRR2EP22531 72 aa8.83□□□□□ -1
NBPF3-212ENST00000486229 SPRR2BP35325 72 aa8.83□□□□□ -1
NBPF3-212ENST00000486229 SPRR2AP35326 72 aa8.83□□□□□ -1
NBPF3-212ENST00000486229 KRTAP25-1Q3LHN0 102 aa8.79□□□□□ -1
NBPF3-212ENST00000486229 SPRR2FQ96RM1 72 aa8.78□□□□□ -1
NBPF3-212ENST00000486229 BRK1Q8WUW1 75 aa8.73□□□□□ -1.01
NBPF3-212ENST00000486229 LCE1AQ5T7P2 110 aa8.7□□□□□ -1.02
NBPF3-212ENST00000486229 ROMO1P60602 79 aa8.68□□□□□ -1.02
NBPF3-212ENST00000486229 GPR98Q8WXG9 6306 aa8.6□□□□□ -1.03
NBPF3-212ENST00000486229 LCE3AQ5TA76 89 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms