RNA–Protein interactions for RNA: ENST00000485627.1

CTSA-208, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 695 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-208ENST00000485627 MUC2Q02817 5179 aa5.04□□□□□ -1.6
CTSA-208ENST00000485627 SEC61BP60468 96 aaKnown RBP5.03□□□□□ -1.6
CTSA-208ENST00000485627 SERP1Q9Y6X1 66 aa4.99□□□□□ -1.61
CTSA-208ENST00000485627 ACYP2P14621 99 aa4.97□□□□□ -1.61
CTSA-208ENST00000485627 C4orf26Q17RF5 130 aa4.97□□□□□ -1.61
CTSA-208ENST00000485627 KRTAP19-1Q8IUB9 90 aa4.97□□□□□ -1.61
CTSA-208ENST00000485627 DMAC1Q96GE9 116 aa4.96□□□□□ -1.62
CTSA-208ENST00000485627 A8MUN3 132 aa4.95□□□□□ -1.62
CTSA-208ENST00000485627 RPS28P62857 69 aaKnown RBP4.95□□□□□ -1.62
CTSA-208ENST00000485627 COA5Q86WW8 74 aa4.93□□□□□ -1.62
CTSA-208ENST00000485627 CHKB-CPT1BH3BT56 60 aa4.92□□□□□ -1.62
CTSA-208ENST00000485627 COX6B2Q6YFQ2 88 aa4.92□□□□□ -1.62
CTSA-208ENST00000485627 FSIP2Q5CZC0 6907 aa4.92□□□□□ -1.62
CTSA-208ENST00000485627 MPLKIPQ8TAP9 179 aa4.91□□□□□ -1.62
CTSA-208ENST00000485627 RBM12B-AS1Q9P1G2 102 aa4.91□□□□□ -1.62
CTSA-208ENST00000485627 CRCT1Q9UGL9 99 aa4.9□□□□□ -1.63
CTSA-208ENST00000485627 MUC17Q685J3 4493 aa4.89□□□□□ -1.63
CTSA-208ENST00000485627 KRTAP4-12Q9BQ66 201 aa4.87□□□□□ -1.63
CTSA-208ENST00000485627 SMIM26A0A096LP01 95 aa4.86□□□□□ -1.63
CTSA-208ENST00000485627 KRTAP9-7A8MTY7 169 aa4.86□□□□□ -1.63
CTSA-208ENST00000485627 KRTAP4-8Q9BYQ9 185 aa4.86□□□□□ -1.63
CTSA-208ENST00000485627 LCE4AQ5TA78 99 aa4.85□□□□□ -1.63
CTSA-208ENST00000485627 SPTSSBQ8NFR3 76 aa4.84□□□□□ -1.63
CTSA-208ENST00000485627 KRTAP15-1Q3LI76 137 aa4.83□□□□□ -1.64
CTSA-208ENST00000485627 H1FX-AS1Q4G0G2 97 aa4.82□□□□□ -1.64
CTSA-208ENST00000485627 KRTAP4-1Q9BYQ7 146 aa4.81□□□□□ -1.64
CTSA-208ENST00000485627 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.79□□□□□ -1.64
CTSA-208ENST00000485627 S4R3F8 94 aa4.79□□□□□ -1.64
CTSA-208ENST00000485627 V9GYY9 64 aa4.79□□□□□ -1.64
CTSA-208ENST00000485627 Q1T7F1 81 aa4.75□□□□□ -1.65
CTSA-208ENST00000485627 LCA10Q71F78 164 aa4.74□□□□□ -1.65
CTSA-208ENST00000485627 SEC61GP60059 68 aa4.72□□□□□ -1.65
CTSA-208ENST00000485627 LINC01558Q9Y6Z2 57 aa4.72□□□□□ -1.65
CTSA-208ENST00000485627 LCE3BQ5TA77 95 aa4.71□□□□□ -1.66
CTSA-208ENST00000485627 PRR15LQ9BU68 103 aa4.71□□□□□ -1.66
CTSA-208ENST00000485627 A0A1B0GU69 56 aa4.69□□□□□ -1.66
CTSA-208ENST00000485627 CSAG1Q6PB30 78 aa4.69□□□□□ -1.66
CTSA-208ENST00000485627 KRTAP9-4Q9BYQ2 154 aa4.69□□□□□ -1.66
CTSA-208ENST00000485627 PSPHP1O15172 72 aa4.68□□□□□ -1.66
CTSA-208ENST00000485627 KRTAP19-2Q3LHN2 52 aa4.65□□□□□ -1.67
CTSA-208ENST00000485627 KRTAP9-9Q9BYP9 154 aa4.64□□□□□ -1.67
CTSA-208ENST00000485627 KRTAP9-3Q9BYQ3 159 aa4.62□□□□□ -1.67
CTSA-208ENST00000485627 Q5VV11 94 aa4.61□□□□□ -1.67
CTSA-208ENST00000485627 FLGP20930 4061 aaPredicted RBP4.61□□□□□ -1.67
CTSA-208ENST00000485627 A6NED7 52 aa4.57□□□□□ -1.68
CTSA-208ENST00000485627 M0R2T5 61 aa4.57□□□□□ -1.68
CTSA-208ENST00000485627 ADM2Q7Z4H4 148 aa4.57□□□□□ -1.68
CTSA-208ENST00000485627 H0YAA0 97 aa4.56□□□□□ -1.68
CTSA-208ENST00000485627 A0A1B0GU33 70 aa4.55□□□□□ -1.68
CTSA-208ENST00000485627 UQCR11O14957 56 aa4.55□□□□□ -1.68
CTSA-208ENST00000485627 MT1HP80294 61 aa4.54□□□□□ -1.68
CTSA-208ENST00000485627 KRTAP10-6P60371 365 aaPredicted RBP4.51□□□□□ -1.69
CTSA-208ENST00000485627 P0C880 135 aa4.5□□□□□ -1.69
CTSA-208ENST00000485627 BRK1Q8WUW1 75 aa4.5□□□□□ -1.69
CTSA-208ENST00000485627 MIR22HGQ0VDD5 57 aa4.48□□□□□ -1.69
CTSA-208ENST00000485627 CDC42SE1Q9NRR8 79 aa4.46□□□□□ -1.7
CTSA-208ENST00000485627 KRTAP4-8A0A0G2JLE6 195 aa4.44□□□□□ -1.7
CTSA-208ENST00000485627 SPATA8Q6RVD6 105 aa4.44□□□□□ -1.7
CTSA-208ENST00000485627 M0QZ58 72 aa4.43□□□□□ -1.7
CTSA-208ENST00000485627 LCE5AQ5TCM9 118 aa4.43□□□□□ -1.7
CTSA-208ENST00000485627 R4GN34 69 aa4.43□□□□□ -1.7
CTSA-208ENST00000485627 PRAC1Q96KF2 57 aa4.4□□□□□ -1.71
CTSA-208ENST00000485627 LCE1DQ5T752 114 aa4.39□□□□□ -1.71
CTSA-208ENST00000485627 CRIPTQ9P021 101 aa4.39□□□□□ -1.71
CTSA-208ENST00000485627 SSPOA2VEC9 5147 aa4.38□□□□□ -1.71
CTSA-208ENST00000485627 KRTAP13-4Q3LI77 160 aa4.38□□□□□ -1.71
CTSA-208ENST00000485627 FCGBPQ9Y6R7 5405 aaPredicted RBP4.37□□□□□ -1.71
CTSA-208ENST00000485627 A0A0D9SG42 100 aa4.37□□□□□ -1.71
CTSA-208ENST00000485627 PRO0628Q9UI54 55 aa4.37□□□□□ -1.71
CTSA-208ENST00000485627 A8MU10 97 aa4.36□□□□□ -1.71
CTSA-208ENST00000485627 KRTAP10-10P60014 251 aa4.36□□□□□ -1.71
CTSA-208ENST00000485627 SYNE2Q8WXH0 6885 aaKnown RBP4.35□□□□□ -1.71
CTSA-208ENST00000485627 USH2AO75445 5202 aa4.35□□□□□ -1.71
CTSA-208ENST00000485627 K7ERS5 55 aa4.35□□□□□ -1.71
CTSA-208ENST00000485627 LINC01554Q52M75 96 aa4.35□□□□□ -1.71
CTSA-208ENST00000485627 MT2AP02795 61 aa4.33□□□□□ -1.72
CTSA-208ENST00000485627 KRTAP9-8Q9BYQ0 159 aa4.32□□□□□ -1.72
CTSA-208ENST00000485627 MT1FP04733 61 aa4.3□□□□□ -1.72
CTSA-208ENST00000485627 MACF1Q9UPN3 7388 aaKnown RBP4.3□□□□□ -1.72
CTSA-208ENST00000485627 SPINT4Q6UDR6 99 aa4.29□□□□□ -1.72
CTSA-208ENST00000485627 KRTAP4-7Q9BYR0 210 aa4.28□□□□□ -1.72
CTSA-208ENST00000485627 PMAIP1Q13794 54 aa4.26□□□□□ -1.73
CTSA-208ENST00000485627 KRTAP12-1P59990 96 aa4.24□□□□□ -1.73
CTSA-208ENST00000485627 SPRR2GQ9BYE4 73 aa4.24□□□□□ -1.73
CTSA-208ENST00000485627 A6NN06 94 aa4.23□□□□□ -1.73
CTSA-208ENST00000485627 KRTAP12-2P59991 146 aa4.22□□□□□ -1.73
CTSA-208ENST00000485627 KRTAP4-9Q9BYQ8 210 aa4.2□□□□□ -1.74
CTSA-208ENST00000485627 PLAC4Q8WY50 150 aa4.19□□□□□ -1.74
CTSA-208ENST00000485627 CAMK2N1Q7Z7J9 78 aa4.17□□□□□ -1.74
CTSA-208ENST00000485627 NEBP20929 6669 aa4.14□□□□□ -1.75
CTSA-208ENST00000485627 KRTAP19-8Q3LI54 63 aa4.13□□□□□ -1.75
CTSA-208ENST00000485627 KRTAP4-11Q9BYQ6 195 aa4.12□□□□□ -1.75
CTSA-208ENST00000485627 KRTAP6-3Q3LI67 103 aa4.11□□□□□ -1.75
CTSA-208ENST00000485627 KRTAP4-2Q9BYR5 136 aa4.11□□□□□ -1.75
CTSA-208ENST00000485627 ROMO1P60602 79 aa4.1□□□□□ -1.75
CTSA-208ENST00000485627 MT1BP07438 61 aa4.06□□□□□ -1.76
CTSA-208ENST00000485627 KRTAP19-6Q3LI70 58 aa4.06□□□□□ -1.76
CTSA-208ENST00000485627 KTN1-AS1Q86SY8 53 aa4.06□□□□□ -1.76
CTSA-208ENST00000485627 NDUFAF8A1L188 74 aa4.02□□□□□ -1.77
CTSA-208ENST00000485627 KRTAP20-1Q3LI63 56 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 104.9 ms