RNA–Protein interactions for RNA: ENST00000475163.5

TSPAN1-206, Transcript of tetraspanin 1, humanhuman

TSL 5

Gene TSPAN1, Length 917 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-206ENST00000475163 C1orf64Q8NEQ6 169 aa5.12□□□□□ -1.59
TSPAN1-206ENST00000475163 LINC00208Q96KT6 92 aa5.12□□□□□ -1.59
TSPAN1-206ENST00000475163 MT1HP80294 61 aa5.11□□□□□ -1.59
TSPAN1-206ENST00000475163 TRAV7A0A075B6U4 112 aa5.1□□□□□ -1.59
TSPAN1-206ENST00000475163 H3BPC8 53 aa5.1□□□□□ -1.59
TSPAN1-206ENST00000475163 C4orf26Q17RF5 130 aa5.1□□□□□ -1.59
TSPAN1-206ENST00000475163 KRTAP4-7Q9BYR0 210 aa5.1□□□□□ -1.59
TSPAN1-206ENST00000475163 KRTAP3-1Q9BYR8 98 aa5.1□□□□□ -1.59
TSPAN1-206ENST00000475163 M0R2T5 61 aa5.07□□□□□ -1.6
TSPAN1-206ENST00000475163 H1FX-AS1Q4G0G2 97 aa5.06□□□□□ -1.6
TSPAN1-206ENST00000475163 FSIP2Q5CZC0 6907 aa5.05□□□□□ -1.6
TSPAN1-206ENST00000475163 A0A0A0MQY5 61 aa5.04□□□□□ -1.6
TSPAN1-206ENST00000475163 KLKP1Q107X0 134 aa5.03□□□□□ -1.6
TSPAN1-206ENST00000475163 SERP2Q8N6R1 65 aa5.03□□□□□ -1.6
TSPAN1-206ENST00000475163 KRTAP4-9Q9BYQ8 210 aa5.03□□□□□ -1.6
TSPAN1-206ENST00000475163 FLGP20930 4061 aaPredicted RBP4.97□□□□□ -1.61
TSPAN1-206ENST00000475163 KRTAP10-6P60371 365 aaPredicted RBP4.97□□□□□ -1.61
TSPAN1-206ENST00000475163 C20orf197Q8N268 126 aa4.97□□□□□ -1.61
TSPAN1-206ENST00000475163 SNURFQ9Y675 71 aa4.97□□□□□ -1.61
TSPAN1-206ENST00000475163 A8MUN3 132 aa4.96□□□□□ -1.62
TSPAN1-206ENST00000475163 COX7CP15954 63 aa4.96□□□□□ -1.62
TSPAN1-206ENST00000475163 S4R3F8 94 aa4.95□□□□□ -1.62
TSPAN1-206ENST00000475163 CRCT1Q9UGL9 99 aa4.94□□□□□ -1.62
TSPAN1-206ENST00000475163 ANAPC13Q9BS18 74 aa4.93□□□□□ -1.62
TSPAN1-206ENST00000475163 LCA10Q71F78 164 aa4.91□□□□□ -1.62
TSPAN1-206ENST00000475163 KRTAP9-3Q9BYQ3 159 aa4.91□□□□□ -1.62
TSPAN1-206ENST00000475163 DMAC1Q96GE9 116 aa4.9□□□□□ -1.63
TSPAN1-206ENST00000475163 KRTAP4-2Q9BYR5 136 aa4.9□□□□□ -1.63
TSPAN1-206ENST00000475163 CSAG1Q6PB30 78 aa4.89□□□□□ -1.63
TSPAN1-206ENST00000475163 LCE5AQ5TCM9 118 aa4.87□□□□□ -1.63
TSPAN1-206ENST00000475163 KRTAP9-8Q9BYQ0 159 aa4.87□□□□□ -1.63
TSPAN1-206ENST00000475163 KRTAP4-11Q9BYQ6 195 aa4.87□□□□□ -1.63
TSPAN1-206ENST00000475163 NDUFC1O43677 76 aa4.86□□□□□ -1.63
TSPAN1-206ENST00000475163 SPANXA2-OT1Q8N9U9 137 aa4.86□□□□□ -1.63
TSPAN1-206ENST00000475163 ACYP2P14621 99 aa4.85□□□□□ -1.63
TSPAN1-206ENST00000475163 MT2AP02795 61 aa4.84□□□□□ -1.63
TSPAN1-206ENST00000475163 CCDC179H3BU77 68 aa4.82□□□□□ -1.64
TSPAN1-206ENST00000475163 H7BZZ5 65 aa4.8□□□□□ -1.64
TSPAN1-206ENST00000475163 MT1FP04733 61 aa4.8□□□□□ -1.64
TSPAN1-206ENST00000475163 KRTAP10-10P60014 251 aa4.8□□□□□ -1.64
TSPAN1-206ENST00000475163 CYSTM1Q9H1C7 97 aa4.8□□□□□ -1.64
TSPAN1-206ENST00000475163 CHKB-CPT1BH3BT56 60 aa4.77□□□□□ -1.65
TSPAN1-206ENST00000475163 SPTSSBQ8NFR3 76 aa4.75□□□□□ -1.65
TSPAN1-206ENST00000475163 H0YAA0 97 aa4.72□□□□□ -1.65
TSPAN1-206ENST00000475163 COA5Q86WW8 74 aa4.71□□□□□ -1.66
TSPAN1-206ENST00000475163 USH2AO75445 5202 aa4.71□□□□□ -1.66
TSPAN1-206ENST00000475163 SSPOA2VEC9 5147 aa4.69□□□□□ -1.66
TSPAN1-206ENST00000475163 ADM2Q7Z4H4 148 aa4.69□□□□□ -1.66
TSPAN1-206ENST00000475163 ATP5EP56381 51 aaPredicted RBP4.68□□□□□ -1.66
TSPAN1-206ENST00000475163 TMEM258P61165 79 aa4.66□□□□□ -1.66
TSPAN1-206ENST00000475163 CRIPTQ9P021 101 aa4.65□□□□□ -1.67
TSPAN1-206ENST00000475163 P0C880 135 aa4.6□□□□□ -1.67
TSPAN1-206ENST00000475163 KRTAP15-1Q3LI76 137 aa4.6□□□□□ -1.67
TSPAN1-206ENST00000475163 SPRR2GQ9BYE4 73 aa4.59□□□□□ -1.67
TSPAN1-206ENST00000475163 FCGBPQ9Y6R7 5405 aaPredicted RBP4.57□□□□□ -1.68
TSPAN1-206ENST00000475163 R4GN34 69 aa4.56□□□□□ -1.68
TSPAN1-206ENST00000475163 SEC61GP60059 68 aa4.55□□□□□ -1.68
TSPAN1-206ENST00000475163 SERP1Q9Y6X1 66 aa4.54□□□□□ -1.68
TSPAN1-206ENST00000475163 M0QZ58 72 aa4.53□□□□□ -1.68
TSPAN1-206ENST00000475163 KRTAP19-8Q3LI54 63 aa4.52□□□□□ -1.69
TSPAN1-206ENST00000475163 Q5VV11 94 aa4.51□□□□□ -1.69
TSPAN1-206ENST00000475163 MACF1Q9UPN3 7388 aaKnown RBP4.49□□□□□ -1.69
TSPAN1-206ENST00000475163 SYNE2Q8WXH0 6885 aaKnown RBP4.49□□□□□ -1.69
TSPAN1-206ENST00000475163 A0A1B0GU69 56 aa4.48□□□□□ -1.69
TSPAN1-206ENST00000475163 MT1BP07438 61 aa4.47□□□□□ -1.69
TSPAN1-206ENST00000475163 LINC01554Q52M75 96 aa4.45□□□□□ -1.7
TSPAN1-206ENST00000475163 PRR15LQ9BU68 103 aa4.44□□□□□ -1.7
TSPAN1-206ENST00000475163 LINC01558Q9Y6Z2 57 aa4.44□□□□□ -1.7
TSPAN1-206ENST00000475163 A0A1B0GU33 70 aa4.43□□□□□ -1.7
TSPAN1-206ENST00000475163 KRTAP19-6Q3LI70 58 aa4.43□□□□□ -1.7
TSPAN1-206ENST00000475163 KRTAP13-4Q3LI77 160 aa4.41□□□□□ -1.7
TSPAN1-206ENST00000475163 PLAC4Q8WY50 150 aa4.41□□□□□ -1.7
TSPAN1-206ENST00000475163 SPATA8Q6RVD6 105 aa4.37□□□□□ -1.71
TSPAN1-206ENST00000475163 V9GYY9 64 aa4.37□□□□□ -1.71
TSPAN1-206ENST00000475163 SMIM26A0A096LP01 95 aa4.36□□□□□ -1.71
TSPAN1-206ENST00000475163 RPS28P62857 69 aaKnown RBP4.36□□□□□ -1.71
TSPAN1-206ENST00000475163 A6NN06 94 aa4.35□□□□□ -1.71
TSPAN1-206ENST00000475163 Q1T7F1 81 aa4.33□□□□□ -1.72
TSPAN1-206ENST00000475163 A0A0D9SG42 100 aa4.32□□□□□ -1.72
TSPAN1-206ENST00000475163 KRTAP10-5P60370 271 aa4.32□□□□□ -1.72
TSPAN1-206ENST00000475163 PRO2289Q9P1D8 64 aa4.3□□□□□ -1.72
TSPAN1-206ENST00000475163 UQCR11O14957 56 aa4.28□□□□□ -1.72
TSPAN1-206ENST00000475163 PSPHP1O15172 72 aa4.28□□□□□ -1.72
TSPAN1-206ENST00000475163 A8MU10 97 aa4.26□□□□□ -1.73
TSPAN1-206ENST00000475163 MT1XP80297 61 aa4.26□□□□□ -1.73
TSPAN1-206ENST00000475163 SPINT4Q6UDR6 99 aa4.26□□□□□ -1.73
TSPAN1-206ENST00000475163 KRTAP5-3Q6L8H2 238 aa4.25□□□□□ -1.73
TSPAN1-206ENST00000475163 CAMK2N1Q7Z7J9 78 aa4.24□□□□□ -1.73
TSPAN1-206ENST00000475163 KRTAP12-1P59990 96 aa4.23□□□□□ -1.73
TSPAN1-206ENST00000475163 MIR22HGQ0VDD5 57 aa4.22□□□□□ -1.73
TSPAN1-206ENST00000475163 KRTAP6-3Q3LI67 103 aa4.22□□□□□ -1.73
TSPAN1-206ENST00000475163 KRTAP12-2P59991 146 aa4.2□□□□□ -1.74
TSPAN1-206ENST00000475163 NEBP20929 6669 aa4.18□□□□□ -1.74
TSPAN1-206ENST00000475163 MUC12Q9UKN1 5478 aa4.17□□□□□ -1.74
TSPAN1-206ENST00000475163 A6NED7 52 aa4.16□□□□□ -1.74
TSPAN1-206ENST00000475163 PRAC1Q96KF2 57 aa4.15□□□□□ -1.75
TSPAN1-206ENST00000475163 K7ERS5 55 aa4.1□□□□□ -1.75
TSPAN1-206ENST00000475163 KRTAP10-7P60409 375 aaPredicted RBP4.08□□□□□ -1.76
TSPAN1-206ENST00000475163 KRTAP10-12P60413 245 aa4.06□□□□□ -1.76
TSPAN1-206ENST00000475163 KRTAP20-1Q3LI63 56 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms