RNA–Protein interactions for RNA: ENST00000472638.1

UBQLN4-203, Transcript of ubiquilin 4, humanhuman

TSL 5

Gene UBQLN4, Length 654 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4-203ENST00000472638 CCDC179H3BU77 68 aa9.61□□□□□ -0.87
UBQLN4-203ENST00000472638 NDUFC1O43677 76 aa9.61□□□□□ -0.87
UBQLN4-203ENST00000472638 USH2AO75445 5202 aa9.59□□□□□ -0.88
UBQLN4-203ENST00000472638 KRTAP9-3Q9BYQ3 159 aa9.58□□□□□ -0.88
UBQLN4-203ENST00000472638 A8MUN3 132 aa9.55□□□□□ -0.88
UBQLN4-203ENST00000472638 LCE2BO14633 110 aa9.55□□□□□ -0.88
UBQLN4-203ENST00000472638 SPANXA2-OT1Q8N9U9 137 aa9.55□□□□□ -0.88
UBQLN4-203ENST00000472638 KRTAP3-1Q9BYR8 98 aa9.55□□□□□ -0.88
UBQLN4-203ENST00000472638 CYSTM1Q9H1C7 97 aa9.55□□□□□ -0.88
UBQLN4-203ENST00000472638 H7BZZ5 65 aa9.53□□□□□ -0.88
UBQLN4-203ENST00000472638 H1FX-AS1Q4G0G2 97 aa9.53□□□□□ -0.88
UBQLN4-203ENST00000472638 SSPOA2VEC9 5147 aa9.51□□□□□ -0.89
UBQLN4-203ENST00000472638 DMAC1Q96GE9 116 aa9.51□□□□□ -0.89
UBQLN4-203ENST00000472638 PCP4P48539 62 aa9.44□□□□□ -0.9
UBQLN4-203ENST00000472638 KRTAP19-1Q8IUB9 90 aa9.39□□□□□ -0.91
UBQLN4-203ENST00000472638 S4R3F8 94 aa9.39□□□□□ -0.91
UBQLN4-203ENST00000472638 ACYP2P14621 99 aa9.38□□□□□ -0.91
UBQLN4-203ENST00000472638 ATP5EP56381 51 aaPredicted RBP9.35□□□□□ -0.91
UBQLN4-203ENST00000472638 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.34□□□□□ -0.91
UBQLN4-203ENST00000472638 TMEM258P61165 79 aa9.34□□□□□ -0.91
UBQLN4-203ENST00000472638 LCA10Q71F78 164 aa9.31□□□□□ -0.92
UBQLN4-203ENST00000472638 FCGBPQ9Y6R7 5405 aaPredicted RBP9.28□□□□□ -0.92
UBQLN4-203ENST00000472638 KRTAP3-3Q9BYR6 98 aa9.25□□□□□ -0.93
UBQLN4-203ENST00000472638 KRTAP9-7A8MTY7 169 aa9.22□□□□□ -0.93
UBQLN4-203ENST00000472638 CSAG1Q6PB30 78 aa9.21□□□□□ -0.94
UBQLN4-203ENST00000472638 COA5Q86WW8 74 aa9.21□□□□□ -0.94
UBQLN4-203ENST00000472638 CHKB-CPT1BH3BT56 60 aa9.2□□□□□ -0.94
UBQLN4-203ENST00000472638 KRTAP19-6Q3LI70 58 aa9.18□□□□□ -0.94
UBQLN4-203ENST00000472638 SPTSSBQ8NFR3 76 aa9.15□□□□□ -0.94
UBQLN4-203ENST00000472638 SERP1Q9Y6X1 66 aa9.03□□□□□ -0.96
UBQLN4-203ENST00000472638 H0YAA0 97 aa9.02□□□□□ -0.97
UBQLN4-203ENST00000472638 MACF1Q9UPN3 7388 aaKnown RBP8.96□□□□□ -0.98
UBQLN4-203ENST00000472638 SPRR2GQ9BYE4 73 aa8.91□□□□□ -0.98
UBQLN4-203ENST00000472638 MT1BP07438 61 aa8.9□□□□□ -0.98
UBQLN4-203ENST00000472638 Q5VV11 94 aa8.89□□□□□ -0.99
UBQLN4-203ENST00000472638 ADM2Q7Z4H4 148 aa8.89□□□□□ -0.99
UBQLN4-203ENST00000472638 KRTAP19-8Q3LI54 63 aa8.86□□□□□ -0.99
UBQLN4-203ENST00000472638 SYNE2Q8WXH0 6885 aaKnown RBP8.84□□□□□ -0.99
UBQLN4-203ENST00000472638 RPS28P62857 69 aaKnown RBP8.84□□□□□ -0.99
UBQLN4-203ENST00000472638 KRTAP3-2Q9BYR7 98 aa8.83□□□□□ -1
UBQLN4-203ENST00000472638 A6NN06 94 aa8.8□□□□□ -1
UBQLN4-203ENST00000472638 P0C880 135 aa8.78□□□□□ -1
UBQLN4-203ENST00000472638 SEC61GP60059 68 aa8.78□□□□□ -1
UBQLN4-203ENST00000472638 CRIPTQ9P021 101 aa8.76□□□□□ -1.01
UBQLN4-203ENST00000472638 LINC01558Q9Y6Z2 57 aa8.75□□□□□ -1.01
UBQLN4-203ENST00000472638 SMIM26A0A096LP01 95 aa8.73□□□□□ -1.01
UBQLN4-203ENST00000472638 KRTAP6-3Q3LI67 103 aa8.72□□□□□ -1.01
UBQLN4-203ENST00000472638 A0A1B0GU69 56 aa8.71□□□□□ -1.02
UBQLN4-203ENST00000472638 V9GYY9 64 aa8.69□□□□□ -1.02
UBQLN4-203ENST00000472638 KRTAP10-5P60370 271 aa8.68□□□□□ -1.02
UBQLN4-203ENST00000472638 PRR15LQ9BU68 103 aa8.68□□□□□ -1.02
UBQLN4-203ENST00000472638 Q1T7F1 81 aa8.66□□□□□ -1.02
UBQLN4-203ENST00000472638 R4GN34 69 aa8.62□□□□□ -1.03
UBQLN4-203ENST00000472638 M0QZ58 72 aa8.58□□□□□ -1.04
UBQLN4-203ENST00000472638 A0A1B0GU33 70 aa8.56□□□□□ -1.04
UBQLN4-203ENST00000472638 KRTAP13-4Q3LI77 160 aa8.48□□□□□ -1.05
UBQLN4-203ENST00000472638 PSPHP1O15172 72 aa8.47□□□□□ -1.05
UBQLN4-203ENST00000472638 UQCR11O14957 56 aa8.4□□□□□ -1.06
UBQLN4-203ENST00000472638 SPATA8Q6RVD6 105 aa8.4□□□□□ -1.06
UBQLN4-203ENST00000472638 PLAC4Q8WY50 150 aa8.39□□□□□ -1.07
UBQLN4-203ENST00000472638 LINC01554Q52M75 96 aa8.38□□□□□ -1.07
UBQLN4-203ENST00000472638 MT1XP80297 61 aa8.34□□□□□ -1.07
UBQLN4-203ENST00000472638 PRO2289Q9P1D8 64 aa8.34□□□□□ -1.07
UBQLN4-203ENST00000472638 NEBP20929 6669 aa8.31□□□□□ -1.08
UBQLN4-203ENST00000472638 KRTAP5-9P26371 169 aa8.3□□□□□ -1.08
UBQLN4-203ENST00000472638 MUC12Q9UKN1 5478 aa8.29□□□□□ -1.08
UBQLN4-203ENST00000472638 A0A0D9SG42 100 aa8.27□□□□□ -1.09
UBQLN4-203ENST00000472638 MIR22HGQ0VDD5 57 aa8.26□□□□□ -1.09
UBQLN4-203ENST00000472638 A6NED7 52 aa8.25□□□□□ -1.09
UBQLN4-203ENST00000472638 A8MU10 97 aa8.23□□□□□ -1.09
UBQLN4-203ENST00000472638 KMT2DO14686 5537 aa8.18□□□□□ -1.1
UBQLN4-203ENST00000472638 KRTAP12-1P59990 96 aa8.16□□□□□ -1.1
UBQLN4-203ENST00000472638 SPRR2FQ96RM1 72 aa8.12□□□□□ -1.11
UBQLN4-203ENST00000472638 SPINT4Q6UDR6 99 aa8.11□□□□□ -1.11
UBQLN4-203ENST00000472638 KRTAP12-2P59991 146 aa8.1□□□□□ -1.11
UBQLN4-203ENST00000472638 KRTAP20-1Q3LI63 56 aa8.1□□□□□ -1.11
UBQLN4-203ENST00000472638 KRTAP8-1Q8IUC2 63 aa8.09□□□□□ -1.11
UBQLN4-203ENST00000472638 CDC42SE1Q9NRR8 79 aa8.08□□□□□ -1.12
UBQLN4-203ENST00000472638 MDN1Q9NU22 5596 aa8.08□□□□□ -1.12
UBQLN4-203ENST00000472638 CAMK2N1Q7Z7J9 78 aa8.02□□□□□ -1.13
UBQLN4-203ENST00000472638 KRTAP4-8A0A0G2JLE6 195 aa8.01□□□□□ -1.13
UBQLN4-203ENST00000472638 SPRR2EP22531 72 aa8.01□□□□□ -1.13
UBQLN4-203ENST00000472638 SPRR2BP35325 72 aa8.01□□□□□ -1.13
UBQLN4-203ENST00000472638 SPRR2AP35326 72 aa8.01□□□□□ -1.13
UBQLN4-203ENST00000472638 KRTAP4-8Q9BYQ9 185 aa8.01□□□□□ -1.13
UBQLN4-203ENST00000472638 KRTAP10-7P60409 375 aaPredicted RBP7.99□□□□□ -1.13
UBQLN4-203ENST00000472638 K7ERS5 55 aa7.98□□□□□ -1.13
UBQLN4-203ENST00000472638 KRTAP10-12P60413 245 aa7.9□□□□□ -1.14
UBQLN4-203ENST00000472638 LCE1AQ5T7P2 110 aa7.88□□□□□ -1.15
UBQLN4-203ENST00000472638 KRTAP2-3P0C7H8 128 aa7.87□□□□□ -1.15
UBQLN4-203ENST00000472638 BRK1Q8WUW1 75 aa7.87□□□□□ -1.15
UBQLN4-203ENST00000472638 KRTAP2-4Q9BYR9 128 aa7.87□□□□□ -1.15
UBQLN4-203ENST00000472638 SPRR2DP22532 72 aa7.74□□□□□ -1.17
UBQLN4-203ENST00000472638 C10orf95Q9H7T3 257 aa7.72□□□□□ -1.17
UBQLN4-203ENST00000472638 KRTAP2-2Q9BYT5 123 aa7.62□□□□□ -1.19
UBQLN4-203ENST00000472638 KRTAP2-1Q9BYU5 128 aa7.62□□□□□ -1.19
UBQLN4-203ENST00000472638 TNP1P09430 55 aa7.59□□□□□ -1.19
UBQLN4-203ENST00000472638 ROMO1P60602 79 aa7.57□□□□□ -1.2
UBQLN4-203ENST00000472638 PRO0628Q9UI54 55 aa7.54□□□□□ -1.2
UBQLN4-203ENST00000472638 KRTAP25-1Q3LHN0 102 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms