RNA–Protein interactions for RNA: ENST00000462276.1

RTF1-202, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-202ENST00000462276 SPANXA2-OT1Q8N9U9 137 aa5.4□□□□□ -1.54
RTF1-202ENST00000462276 CCDC179H3BU77 68 aa5.37□□□□□ -1.55
RTF1-202ENST00000462276 H1FX-AS1Q4G0G2 97 aa5.36□□□□□ -1.55
RTF1-202ENST00000462276 H7BZZ5 65 aa5.35□□□□□ -1.55
RTF1-202ENST00000462276 KRTAP19-2Q3LHN2 52 aa5.35□□□□□ -1.55
RTF1-202ENST00000462276 PCP4P48539 62 aa5.33□□□□□ -1.56
RTF1-202ENST00000462276 DMAC1Q96GE9 116 aa5.33□□□□□ -1.56
RTF1-202ENST00000462276 KRTAP3-1Q9BYR8 98 aa5.33□□□□□ -1.56
RTF1-202ENST00000462276 KRTAP19-1Q8IUB9 90 aa5.32□□□□□ -1.56
RTF1-202ENST00000462276 ACYP2P14621 99 aa5.31□□□□□ -1.56
RTF1-202ENST00000462276 CYSTM1Q9H1C7 97 aa5.3□□□□□ -1.56
RTF1-202ENST00000462276 ATP5EP56381 51 aaPredicted RBP5.29□□□□□ -1.56
RTF1-202ENST00000462276 KRTAP9-9Q9BYP9 154 aa5.29□□□□□ -1.56
RTF1-202ENST00000462276 KRTAP9-4Q9BYQ2 154 aa5.29□□□□□ -1.56
RTF1-202ENST00000462276 FLGP20930 4061 aaPredicted RBP5.27□□□□□ -1.57
RTF1-202ENST00000462276 TMEM258P61165 79 aa5.27□□□□□ -1.57
RTF1-202ENST00000462276 KRTAP4-8A0A0G2JLE6 195 aa5.24□□□□□ -1.57
RTF1-202ENST00000462276 S4R3F8 94 aa5.24□□□□□ -1.57
RTF1-202ENST00000462276 MT1HP80294 61 aa5.23□□□□□ -1.57
RTF1-202ENST00000462276 FSIP2Q5CZC0 6907 aa5.22□□□□□ -1.57
RTF1-202ENST00000462276 CSAG1Q6PB30 78 aa5.21□□□□□ -1.58
RTF1-202ENST00000462276 CHKB-CPT1BH3BT56 60 aa5.2□□□□□ -1.58
RTF1-202ENST00000462276 M0R2T5 61 aa5.2□□□□□ -1.58
RTF1-202ENST00000462276 SPTSSBQ8NFR3 76 aa5.2□□□□□ -1.58
RTF1-202ENST00000462276 LCA10Q71F78 164 aa5.19□□□□□ -1.58
RTF1-202ENST00000462276 COA5Q86WW8 74 aa5.17□□□□□ -1.58
RTF1-202ENST00000462276 CRCT1Q9UGL9 99 aa5.11□□□□□ -1.59
RTF1-202ENST00000462276 LCE1DQ5T752 114 aa5.1□□□□□ -1.59
RTF1-202ENST00000462276 SERP1Q9Y6X1 66 aa5.1□□□□□ -1.59
RTF1-202ENST00000462276 H0YAA0 97 aa5.08□□□□□ -1.6
RTF1-202ENST00000462276 KRTAP10-6P60371 365 aaPredicted RBP5.07□□□□□ -1.6
RTF1-202ENST00000462276 KRTAP4-7Q9BYR0 210 aa5.06□□□□□ -1.6
RTF1-202ENST00000462276 RPS28P62857 69 aaKnown RBP5.05□□□□□ -1.6
RTF1-202ENST00000462276 KRTAP9-8Q9BYQ0 159 aa5.02□□□□□ -1.61
RTF1-202ENST00000462276 SEC61GP60059 68 aa5□□□□□ -1.61
RTF1-202ENST00000462276 MT2AP02795 61 aa4.97□□□□□ -1.61
RTF1-202ENST00000462276 ADM2Q7Z4H4 148 aa4.97□□□□□ -1.61
RTF1-202ENST00000462276 CRIPTQ9P021 101 aa4.97□□□□□ -1.61
RTF1-202ENST00000462276 SMIM26A0A096LP01 95 aa4.96□□□□□ -1.62
RTF1-202ENST00000462276 KRTAP10-10P60014 251 aa4.96□□□□□ -1.62
RTF1-202ENST00000462276 V9GYY9 64 aa4.96□□□□□ -1.62
RTF1-202ENST00000462276 PRR15LQ9BU68 103 aa4.93□□□□□ -1.62
RTF1-202ENST00000462276 KRTAP4-9Q9BYQ8 210 aa4.93□□□□□ -1.62
RTF1-202ENST00000462276 LINC01558Q9Y6Z2 57 aa4.93□□□□□ -1.62
RTF1-202ENST00000462276 A0A1B0GU69 56 aa4.92□□□□□ -1.62
RTF1-202ENST00000462276 MT1FP04733 61 aa4.92□□□□□ -1.62
RTF1-202ENST00000462276 Q1T7F1 81 aa4.9□□□□□ -1.63
RTF1-202ENST00000462276 P0C880 135 aa4.89□□□□□ -1.63
RTF1-202ENST00000462276 M0QZ58 72 aa4.87□□□□□ -1.63
RTF1-202ENST00000462276 KRTAP19-4Q3LI73 84 aa4.87□□□□□ -1.63
RTF1-202ENST00000462276 SSPOA2VEC9 5147 aa4.87□□□□□ -1.63
RTF1-202ENST00000462276 USH2AO75445 5202 aa4.86□□□□□ -1.63
RTF1-202ENST00000462276 KRTAP9-3Q9BYQ3 159 aa4.85□□□□□ -1.63
RTF1-202ENST00000462276 R4GN34 69 aa4.85□□□□□ -1.63
RTF1-202ENST00000462276 A0A1B0GU33 70 aa4.84□□□□□ -1.63
RTF1-202ENST00000462276 SPRR2GQ9BYE4 73 aa4.84□□□□□ -1.63
RTF1-202ENST00000462276 KRTAP4-2Q9BYR5 136 aa4.83□□□□□ -1.64
RTF1-202ENST00000462276 LCE4AQ5TA78 99 aa4.82□□□□□ -1.64
RTF1-202ENST00000462276 Q5VV11 94 aa4.8□□□□□ -1.64
RTF1-202ENST00000462276 KRTAP9-7A8MTY7 169 aa4.78□□□□□ -1.64
RTF1-202ENST00000462276 UQCR11O14957 56 aa4.76□□□□□ -1.65
RTF1-202ENST00000462276 PSPHP1O15172 72 aa4.76□□□□□ -1.65
RTF1-202ENST00000462276 KRTAP4-11Q9BYQ6 195 aa4.76□□□□□ -1.65
RTF1-202ENST00000462276 FCGBPQ9Y6R7 5405 aaPredicted RBP4.75□□□□□ -1.65
RTF1-202ENST00000462276 KRTAP19-8Q3LI54 63 aa4.73□□□□□ -1.65
RTF1-202ENST00000462276 A6NN06 94 aa4.71□□□□□ -1.66
RTF1-202ENST00000462276 KRTAP13-4Q3LI77 160 aa4.7□□□□□ -1.66
RTF1-202ENST00000462276 LINC01554Q52M75 96 aa4.69□□□□□ -1.66
RTF1-202ENST00000462276 SPATA8Q6RVD6 105 aa4.68□□□□□ -1.66
RTF1-202ENST00000462276 LCE5AQ5TCM9 118 aa4.67□□□□□ -1.66
RTF1-202ENST00000462276 A6NED7 52 aa4.66□□□□□ -1.66
RTF1-202ENST00000462276 MIR22HGQ0VDD5 57 aa4.66□□□□□ -1.66
RTF1-202ENST00000462276 PLAC4Q8WY50 150 aa4.66□□□□□ -1.66
RTF1-202ENST00000462276 MT1BP07438 61 aa4.63□□□□□ -1.67
RTF1-202ENST00000462276 A0A0D9SG42 100 aa4.62□□□□□ -1.67
RTF1-202ENST00000462276 MACF1Q9UPN3 7388 aaKnown RBP4.61□□□□□ -1.67
RTF1-202ENST00000462276 SYNE2Q8WXH0 6885 aaKnown RBP4.6□□□□□ -1.67
RTF1-202ENST00000462276 H3BS24 57 aa4.59□□□□□ -1.67
RTF1-202ENST00000462276 A8MU10 97 aa4.58□□□□□ -1.68
RTF1-202ENST00000462276 K7ERS5 55 aa4.56□□□□□ -1.68
RTF1-202ENST00000462276 KRTAP12-1P59990 96 aa4.56□□□□□ -1.68
RTF1-202ENST00000462276 CDC42SE1Q9NRR8 79 aa4.56□□□□□ -1.68
RTF1-202ENST00000462276 SPINT4Q6UDR6 99 aa4.55□□□□□ -1.68
RTF1-202ENST00000462276 KRTAP19-6Q3LI70 58 aa4.53□□□□□ -1.68
RTF1-202ENST00000462276 PRO2289Q9P1D8 64 aa4.53□□□□□ -1.68
RTF1-202ENST00000462276 CAMK2N1Q7Z7J9 78 aa4.52□□□□□ -1.69
RTF1-202ENST00000462276 KRTAP12-2P59991 146 aa4.51□□□□□ -1.69
RTF1-202ENST00000462276 KRTAP10-5P60370 271 aa4.48□□□□□ -1.69
RTF1-202ENST00000462276 MT1XP80297 61 aa4.44□□□□□ -1.7
RTF1-202ENST00000462276 BRK1Q8WUW1 75 aa4.44□□□□□ -1.7
RTF1-202ENST00000462276 KRTAP6-3Q3LI67 103 aa4.38□□□□□ -1.71
RTF1-202ENST00000462276 NEBP20929 6669 aa4.38□□□□□ -1.71
RTF1-202ENST00000462276 MUC12Q9UKN1 5478 aa4.36□□□□□ -1.71
RTF1-202ENST00000462276 KRTAP5-3Q6L8H2 238 aa4.32□□□□□ -1.72
RTF1-202ENST00000462276 C10orf95Q9H7T3 257 aa4.31□□□□□ -1.72
RTF1-202ENST00000462276 TNP1P09430 55 aa4.29□□□□□ -1.72
RTF1-202ENST00000462276 PRO0628Q9UI54 55 aa4.29□□□□□ -1.72
RTF1-202ENST00000462276 ROMO1P60602 79 aa4.28□□□□□ -1.72
RTF1-202ENST00000462276 KRTAP25-1Q3LHN0 102 aa4.26□□□□□ -1.73
RTF1-202ENST00000462276 KRTAP10-12P60413 245 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms