RNA–Protein interactions for RNA: ENST00000461903.1

HLA-A-205, Transcript of major histocompatibility complex, class I, A, humanhuman

Gene HLA-A, Length 1,352 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-205ENST00000461903 LCA10Q71F78 164 aa10.79□□□□□ -0.68
HLA-A-205ENST00000461903 DMAC1Q96GE9 116 aa10.79□□□□□ -0.68
HLA-A-205ENST00000461903 CSAG1Q6PB30 78 aa10.72□□□□□ -0.69
HLA-A-205ENST00000461903 SPANXA2-OT1Q8N9U9 137 aa10.71□□□□□ -0.69
HLA-A-205ENST00000461903 KRTAP9-7A8MTY7 169 aa10.7□□□□□ -0.7
HLA-A-205ENST00000461903 NDUFC1O43677 76 aa10.7□□□□□ -0.7
HLA-A-205ENST00000461903 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.67□□□□□ -0.7
HLA-A-205ENST00000461903 ACYP2P14621 99 aa10.66□□□□□ -0.7
HLA-A-205ENST00000461903 KRTAP9-8Q9BYQ0 159 aa10.66□□□□□ -0.7
HLA-A-205ENST00000461903 KRTAP3-3Q9BYR6 98 aa10.65□□□□□ -0.71
HLA-A-205ENST00000461903 CCDC179H3BU77 68 aa10.63□□□□□ -0.71
HLA-A-205ENST00000461903 CYSTM1Q9H1C7 97 aa10.62□□□□□ -0.71
HLA-A-205ENST00000461903 MT2AP02795 61 aa10.61□□□□□ -0.71
HLA-A-205ENST00000461903 H7BZZ5 65 aa10.6□□□□□ -0.71
HLA-A-205ENST00000461903 KRTAP10-10P60014 251 aa10.54□□□□□ -0.72
HLA-A-205ENST00000461903 MT1FP04733 61 aa10.53□□□□□ -0.72
HLA-A-205ENST00000461903 CHKB-CPT1BH3BT56 60 aa10.52□□□□□ -0.72
HLA-A-205ENST00000461903 SSPOA2VEC9 5147 aa10.48□□□□□ -0.73
HLA-A-205ENST00000461903 SPTSSBQ8NFR3 76 aa10.46□□□□□ -0.74
HLA-A-205ENST00000461903 USH2AO75445 5202 aa10.44□□□□□ -0.74
HLA-A-205ENST00000461903 COA5Q86WW8 74 aa10.39□□□□□ -0.75
HLA-A-205ENST00000461903 H0YAA0 97 aa10.38□□□□□ -0.75
HLA-A-205ENST00000461903 ATP5EP56381 51 aaPredicted RBP10.36□□□□□ -0.75
HLA-A-205ENST00000461903 SVIPQ8NHG7 77 aa10.35□□□□□ -0.75
HLA-A-205ENST00000461903 FCGBPQ9Y6R7 5405 aaPredicted RBP10.33□□□□□ -0.76
HLA-A-205ENST00000461903 ADM2Q7Z4H4 148 aa10.31□□□□□ -0.76
HLA-A-205ENST00000461903 KRTAP9-3Q9BYQ3 159 aa10.31□□□□□ -0.76
HLA-A-205ENST00000461903 TMEM258P61165 79 aa10.3□□□□□ -0.76
HLA-A-205ENST00000461903 PCP4P48539 62 aa10.23□□□□□ -0.77
HLA-A-205ENST00000461903 KRTAP19-1Q8IUB9 90 aa10.22□□□□□ -0.77
HLA-A-205ENST00000461903 CRIPTQ9P021 101 aa10.18□□□□□ -0.78
HLA-A-205ENST00000461903 LCE2BO14633 110 aa10.16□□□□□ -0.78
HLA-A-205ENST00000461903 P0C880 135 aa10.13□□□□□ -0.79
HLA-A-205ENST00000461903 KRTAP3-2Q9BYR7 98 aa10.11□□□□□ -0.79
HLA-A-205ENST00000461903 MACF1Q9UPN3 7388 aaKnown RBP10.09□□□□□ -0.79
HLA-A-205ENST00000461903 SPRR2GQ9BYE4 73 aa10.07□□□□□ -0.8
HLA-A-205ENST00000461903 SYNE2Q8WXH0 6885 aaKnown RBP10.05□□□□□ -0.8
HLA-A-205ENST00000461903 SEC61GP60059 68 aa10.02□□□□□ -0.8
HLA-A-205ENST00000461903 R4GN34 69 aa10.02□□□□□ -0.8
HLA-A-205ENST00000461903 SERP1Q9Y6X1 66 aa9.99□□□□□ -0.81
HLA-A-205ENST00000461903 M0QZ58 72 aa9.98□□□□□ -0.81
HLA-A-205ENST00000461903 KRTAP19-6Q3LI70 58 aa9.93□□□□□ -0.82
HLA-A-205ENST00000461903 Q5VV11 94 aa9.91□□□□□ -0.82
HLA-A-205ENST00000461903 KRTAP19-8Q3LI54 63 aa9.9□□□□□ -0.82
HLA-A-205ENST00000461903 A0A1B0GU69 56 aa9.88□□□□□ -0.83
HLA-A-205ENST00000461903 MT1BP07438 61 aa9.81□□□□□ -0.84
HLA-A-205ENST00000461903 LINC01554Q52M75 96 aa9.8□□□□□ -0.84
HLA-A-205ENST00000461903 KRTAP6-3Q3LI67 103 aa9.79□□□□□ -0.84
HLA-A-205ENST00000461903 PRR15LQ9BU68 103 aa9.78□□□□□ -0.84
HLA-A-205ENST00000461903 LINC01558Q9Y6Z2 57 aa9.77□□□□□ -0.84
HLA-A-205ENST00000461903 A0A1B0GU33 70 aa9.75□□□□□ -0.85
HLA-A-205ENST00000461903 KRTAP13-4Q3LI77 160 aa9.7□□□□□ -0.86
HLA-A-205ENST00000461903 PLAC4Q8WY50 150 aa9.68□□□□□ -0.86
HLA-A-205ENST00000461903 V9GYY9 64 aa9.63□□□□□ -0.87
HLA-A-205ENST00000461903 SMIM26A0A096LP01 95 aa9.61□□□□□ -0.87
HLA-A-205ENST00000461903 RPS28P62857 69 aaKnown RBP9.61□□□□□ -0.87
HLA-A-205ENST00000461903 SPATA8Q6RVD6 105 aa9.61□□□□□ -0.87
HLA-A-205ENST00000461903 A6NN06 94 aa9.56□□□□□ -0.88
HLA-A-205ENST00000461903 Q1T7F1 81 aa9.55□□□□□ -0.88
HLA-A-205ENST00000461903 A0A0D9SG42 100 aa9.53□□□□□ -0.88
HLA-A-205ENST00000461903 NEBP20929 6669 aa9.51□□□□□ -0.89
HLA-A-205ENST00000461903 KRTAP10-5P60370 271 aa9.48□□□□□ -0.89
HLA-A-205ENST00000461903 PSPHP1O15172 72 aa9.46□□□□□ -0.9
HLA-A-205ENST00000461903 UQCR11O14957 56 aa9.44□□□□□ -0.9
HLA-A-205ENST00000461903 PRO2289Q9P1D8 64 aa9.43□□□□□ -0.9
HLA-A-205ENST00000461903 A8MU10 97 aa9.37□□□□□ -0.91
HLA-A-205ENST00000461903 SPINT4Q6UDR6 99 aa9.37□□□□□ -0.91
HLA-A-205ENST00000461903 MUC12Q9UKN1 5478 aa9.36□□□□□ -0.91
HLA-A-205ENST00000461903 MT1XP80297 61 aa9.36□□□□□ -0.91
HLA-A-205ENST00000461903 CAMK2N1Q7Z7J9 78 aa9.34□□□□□ -0.91
HLA-A-205ENST00000461903 KRTAP20-1Q3LI63 56 aa9.33□□□□□ -0.92
HLA-A-205ENST00000461903 KRTAP12-1P59990 96 aa9.31□□□□□ -0.92
HLA-A-205ENST00000461903 MIR22HGQ0VDD5 57 aa9.29□□□□□ -0.92
HLA-A-205ENST00000461903 KRTAP12-2P59991 146 aa9.25□□□□□ -0.93
HLA-A-205ENST00000461903 A6NED7 52 aa9.2□□□□□ -0.94
HLA-A-205ENST00000461903 KRTAP5-9P26371 169 aa9.13□□□□□ -0.95
HLA-A-205ENST00000461903 KMT2DO14686 5537 aa9.06□□□□□ -0.96
HLA-A-205ENST00000461903 K7ERS5 55 aa9.04□□□□□ -0.96
HLA-A-205ENST00000461903 MDN1Q9NU22 5596 aa9.04□□□□□ -0.96
HLA-A-205ENST00000461903 KRTAP10-7P60409 375 aaPredicted RBP8.95□□□□□ -0.98
HLA-A-205ENST00000461903 KRTAP2-3P0C7H8 128 aa8.93□□□□□ -0.98
HLA-A-205ENST00000461903 KRTAP2-4Q9BYR9 128 aa8.93□□□□□ -0.98
HLA-A-205ENST00000461903 CDC42SE1Q9NRR8 79 aa8.91□□□□□ -0.98
HLA-A-205ENST00000461903 KRTAP10-12P60413 245 aa8.89□□□□□ -0.99
HLA-A-205ENST00000461903 C10orf95Q9H7T3 257 aa8.83□□□□□ -1
HLA-A-205ENST00000461903 KRTAP8-1Q8IUC2 63 aa8.76□□□□□ -1.01
HLA-A-205ENST00000461903 KRTAP4-8A0A0G2JLE6 195 aa8.74□□□□□ -1.01
HLA-A-205ENST00000461903 TNP1P09430 55 aa8.74□□□□□ -1.01
HLA-A-205ENST00000461903 KRTAP4-8Q9BYQ9 185 aa8.74□□□□□ -1.01
HLA-A-205ENST00000461903 SPRR2EP22531 72 aa8.7□□□□□ -1.02
HLA-A-205ENST00000461903 SPRR2BP35325 72 aa8.7□□□□□ -1.02
HLA-A-205ENST00000461903 SPRR2AP35326 72 aa8.7□□□□□ -1.02
HLA-A-205ENST00000461903 SPRR2FQ96RM1 72 aa8.69□□□□□ -1.02
HLA-A-205ENST00000461903 BRK1Q8WUW1 75 aa8.61□□□□□ -1.03
HLA-A-205ENST00000461903 KRTAP2-2Q9BYT5 123 aa8.61□□□□□ -1.03
HLA-A-205ENST00000461903 KRTAP2-1Q9BYU5 128 aa8.61□□□□□ -1.03
HLA-A-205ENST00000461903 KRTAP25-1Q3LHN0 102 aa8.55□□□□□ -1.04
HLA-A-205ENST00000461903 LCE1AQ5T7P2 110 aa8.53□□□□□ -1.04
HLA-A-205ENST00000461903 ROMO1P60602 79 aa8.49□□□□□ -1.05
HLA-A-205ENST00000461903 LCE3AQ5TA76 89 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms