RNA–Protein interactions for RNA: ENST00000431543.6

LAMA4-208, Transcript of laminin subunit alpha 4, humanhuman

TSL 1 (best) BASIC

Gene LAMA4, Length 1,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-208ENST00000431543 C4orf26Q17RF5 130 aa7.19□□□□□ -1.26
LAMA4-208ENST00000431543 NDUFC1O43677 76 aa7.18□□□□□ -1.26
LAMA4-208ENST00000431543 MPLKIPQ8TAP9 179 aa7.17□□□□□ -1.26
LAMA4-208ENST00000431543 A8MUN3 132 aa7.11□□□□□ -1.27
LAMA4-208ENST00000431543 CCDC179H3BU77 68 aa7.11□□□□□ -1.27
LAMA4-208ENST00000431543 H1FX-AS1Q4G0G2 97 aa7.1□□□□□ -1.27
LAMA4-208ENST00000431543 KRTAP9-9Q9BYP9 154 aa7.09□□□□□ -1.27
LAMA4-208ENST00000431543 KRTAP9-4Q9BYQ2 154 aa7.09□□□□□ -1.27
LAMA4-208ENST00000431543 SPANXA2-OT1Q8N9U9 137 aa7.08□□□□□ -1.28
LAMA4-208ENST00000431543 FSIP2Q5CZC0 6907 aa7.03□□□□□ -1.28
LAMA4-208ENST00000431543 KRTAP4-8A0A0G2JLE6 195 aa7.03□□□□□ -1.28
LAMA4-208ENST00000431543 H7BZZ5 65 aa7.03□□□□□ -1.28
LAMA4-208ENST00000431543 ACYP2P14621 99 aa7.03□□□□□ -1.28
LAMA4-208ENST00000431543 PCP4P48539 62 aa7.03□□□□□ -1.28
LAMA4-208ENST00000431543 KRTAP9-8Q9BYQ0 159 aa7.03□□□□□ -1.28
LAMA4-208ENST00000431543 KRTAP3-1Q9BYR8 98 aa7.02□□□□□ -1.29
LAMA4-208ENST00000431543 KRTAP19-1Q8IUB9 90 aa7.01□□□□□ -1.29
LAMA4-208ENST00000431543 DMAC1Q96GE9 116 aa7.01□□□□□ -1.29
LAMA4-208ENST00000431543 CYSTM1Q9H1C7 97 aa6.99□□□□□ -1.29
LAMA4-208ENST00000431543 S4R3F8 94 aa6.98□□□□□ -1.29
LAMA4-208ENST00000431543 ATP5EP56381 51 aaPredicted RBP6.95□□□□□ -1.3
LAMA4-208ENST00000431543 MT2AP02795 61 aa6.94□□□□□ -1.3
LAMA4-208ENST00000431543 CRCT1Q9UGL9 99 aa6.94□□□□□ -1.3
LAMA4-208ENST00000431543 CHKB-CPT1BH3BT56 60 aa6.93□□□□□ -1.3
LAMA4-208ENST00000431543 TMEM258P61165 79 aa6.93□□□□□ -1.3
LAMA4-208ENST00000431543 MT1FP04733 61 aa6.89□□□□□ -1.31
LAMA4-208ENST00000431543 CSAG1Q6PB30 78 aa6.89□□□□□ -1.31
LAMA4-208ENST00000431543 LCA10Q71F78 164 aa6.89□□□□□ -1.31
LAMA4-208ENST00000431543 SPTSSBQ8NFR3 76 aa6.89□□□□□ -1.31
LAMA4-208ENST00000431543 KRTAP10-10P60014 251 aa6.83□□□□□ -1.32
LAMA4-208ENST00000431543 COA5Q86WW8 74 aa6.83□□□□□ -1.32
LAMA4-208ENST00000431543 USH2AO75445 5202 aa6.82□□□□□ -1.32
LAMA4-208ENST00000431543 KRTAP4-7Q9BYR0 210 aa6.81□□□□□ -1.32
LAMA4-208ENST00000431543 LCE1DQ5T752 114 aa6.8□□□□□ -1.32
LAMA4-208ENST00000431543 KRTAP9-3Q9BYQ3 159 aa6.8□□□□□ -1.32
LAMA4-208ENST00000431543 SERP1Q9Y6X1 66 aa6.72□□□□□ -1.33
LAMA4-208ENST00000431543 SSPOA2VEC9 5147 aa6.71□□□□□ -1.33
LAMA4-208ENST00000431543 H0YAA0 97 aa6.66□□□□□ -1.34
LAMA4-208ENST00000431543 SEC61GP60059 68 aa6.65□□□□□ -1.34
LAMA4-208ENST00000431543 ADM2Q7Z4H4 148 aa6.62□□□□□ -1.35
LAMA4-208ENST00000431543 KRTAP4-9Q9BYQ8 210 aa6.61□□□□□ -1.35
LAMA4-208ENST00000431543 RPS28P62857 69 aaKnown RBP6.6□□□□□ -1.35
LAMA4-208ENST00000431543 FCGBPQ9Y6R7 5405 aaPredicted RBP6.55□□□□□ -1.36
LAMA4-208ENST00000431543 PRR15LQ9BU68 103 aa6.54□□□□□ -1.36
LAMA4-208ENST00000431543 SMIM26A0A096LP01 95 aa6.53□□□□□ -1.36
LAMA4-208ENST00000431543 A0A1B0GU69 56 aa6.53□□□□□ -1.36
LAMA4-208ENST00000431543 CRIPTQ9P021 101 aa6.53□□□□□ -1.36
LAMA4-208ENST00000431543 V9GYY9 64 aa6.53□□□□□ -1.36
LAMA4-208ENST00000431543 LINC01558Q9Y6Z2 57 aa6.5□□□□□ -1.37
LAMA4-208ENST00000431543 KRTAP4-2Q9BYR5 136 aa6.49□□□□□ -1.37
LAMA4-208ENST00000431543 P0C880 135 aa6.47□□□□□ -1.37
LAMA4-208ENST00000431543 KRTAP19-6Q3LI70 58 aa6.46□□□□□ -1.38
LAMA4-208ENST00000431543 R4GN34 69 aa6.45□□□□□ -1.38
LAMA4-208ENST00000431543 Q1T7F1 81 aa6.44□□□□□ -1.38
LAMA4-208ENST00000431543 A0A1B0GU33 70 aa6.41□□□□□ -1.38
LAMA4-208ENST00000431543 M0QZ58 72 aa6.41□□□□□ -1.38
LAMA4-208ENST00000431543 KRTAP9-7A8MTY7 169 aa6.4□□□□□ -1.38
LAMA4-208ENST00000431543 SPRR2GQ9BYE4 73 aa6.38□□□□□ -1.39
LAMA4-208ENST00000431543 MT1BP07438 61 aa6.35□□□□□ -1.39
LAMA4-208ENST00000431543 KRTAP4-11Q9BYQ6 195 aa6.34□□□□□ -1.39
LAMA4-208ENST00000431543 KRTAP19-8Q3LI54 63 aa6.33□□□□□ -1.4
LAMA4-208ENST00000431543 PSPHP1O15172 72 aa6.32□□□□□ -1.4
LAMA4-208ENST00000431543 LCE4AQ5TA78 99 aa6.31□□□□□ -1.4
LAMA4-208ENST00000431543 Q5VV11 94 aa6.3□□□□□ -1.4
LAMA4-208ENST00000431543 UQCR11O14957 56 aa6.29□□□□□ -1.4
LAMA4-208ENST00000431543 MACF1Q9UPN3 7388 aaKnown RBP6.28□□□□□ -1.4
LAMA4-208ENST00000431543 LINC01554Q52M75 96 aa6.28□□□□□ -1.4
LAMA4-208ENST00000431543 SPATA8Q6RVD6 105 aa6.24□□□□□ -1.41
LAMA4-208ENST00000431543 KRTAP13-4Q3LI77 160 aa6.21□□□□□ -1.42
LAMA4-208ENST00000431543 PLAC4Q8WY50 150 aa6.21□□□□□ -1.42
LAMA4-208ENST00000431543 KRTAP19-4Q3LI73 84 aa6.2□□□□□ -1.42
LAMA4-208ENST00000431543 SYNE2Q8WXH0 6885 aaKnown RBP6.2□□□□□ -1.42
LAMA4-208ENST00000431543 A6NED7 52 aa6.19□□□□□ -1.42
LAMA4-208ENST00000431543 A6NN06 94 aa6.19□□□□□ -1.42
LAMA4-208ENST00000431543 A0A0D9SG42 100 aa6.18□□□□□ -1.42
LAMA4-208ENST00000431543 MIR22HGQ0VDD5 57 aa6.18□□□□□ -1.42
LAMA4-208ENST00000431543 KRTAP10-5P60370 271 aa6.15□□□□□ -1.42
LAMA4-208ENST00000431543 LCE5AQ5TCM9 118 aa6.13□□□□□ -1.43
LAMA4-208ENST00000431543 A8MU10 97 aa6.1□□□□□ -1.43
LAMA4-208ENST00000431543 SPINT4Q6UDR6 99 aa6.1□□□□□ -1.43
LAMA4-208ENST00000431543 K7ERS5 55 aa6.06□□□□□ -1.44
LAMA4-208ENST00000431543 KRTAP6-3Q3LI67 103 aa6.05□□□□□ -1.44
LAMA4-208ENST00000431543 CAMK2N1Q7Z7J9 78 aa6.04□□□□□ -1.44
LAMA4-208ENST00000431543 KRTAP12-1P59990 96 aa6.02□□□□□ -1.45
LAMA4-208ENST00000431543 CDC42SE1Q9NRR8 79 aa6.01□□□□□ -1.45
LAMA4-208ENST00000431543 PRO2289Q9P1D8 64 aa6□□□□□ -1.45
LAMA4-208ENST00000431543 KRTAP12-2P59991 146 aa5.98□□□□□ -1.45
LAMA4-208ENST00000431543 MT1XP80297 61 aa5.98□□□□□ -1.45
LAMA4-208ENST00000431543 KRTAP5-3Q6L8H2 238 aa5.94□□□□□ -1.46
LAMA4-208ENST00000431543 BRK1Q8WUW1 75 aa5.89□□□□□ -1.47
LAMA4-208ENST00000431543 KMT2DO14686 5537 aa5.84□□□□□ -1.48
LAMA4-208ENST00000431543 MUC12Q9UKN1 5478 aa5.83□□□□□ -1.48
LAMA4-208ENST00000431543 KRTAP5-9P26371 169 aa5.82□□□□□ -1.48
LAMA4-208ENST00000431543 NEBP20929 6669 aa5.78□□□□□ -1.48
LAMA4-208ENST00000431543 MDN1Q9NU22 5596 aa5.72□□□□□ -1.49
LAMA4-208ENST00000431543 KRTAP10-7P60409 375 aaPredicted RBP5.72□□□□□ -1.49
LAMA4-208ENST00000431543 KRTAP8-1Q8IUC2 63 aa5.7□□□□□ -1.5
LAMA4-208ENST00000431543 C10orf95Q9H7T3 257 aa5.7□□□□□ -1.5
LAMA4-208ENST00000431543 SPRR2FQ96RM1 72 aa5.69□□□□□ -1.5
LAMA4-208ENST00000431543 TNP1P09430 55 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 86.1 ms