RNA–Protein interactions for RNA: ENST00000409531.5

TSPAN4-208, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,339 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-208ENST00000409531 SPANXA2-OT1Q8N9U9 137 aa8.08□□□□□ -1.12
TSPAN4-208ENST00000409531 DMAC1Q96GE9 116 aa8.08□□□□□ -1.12
TSPAN4-208ENST00000409531 S4R3F8 94 aa8.07□□□□□ -1.12
TSPAN4-208ENST00000409531 CCDC179H3BU77 68 aa8.06□□□□□ -1.12
TSPAN4-208ENST00000409531 H7BZZ5 65 aa8.03□□□□□ -1.12
TSPAN4-208ENST00000409531 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.02□□□□□ -1.13
TSPAN4-208ENST00000409531 ACYP2P14621 99 aa8.02□□□□□ -1.13
TSPAN4-208ENST00000409531 CYSTM1Q9H1C7 97 aa8.02□□□□□ -1.13
TSPAN4-208ENST00000409531 LCA10Q71F78 164 aa8□□□□□ -1.13
TSPAN4-208ENST00000409531 KRTAP9-8Q9BYQ0 159 aa7.99□□□□□ -1.13
TSPAN4-208ENST00000409531 CSAG1Q6PB30 78 aa7.95□□□□□ -1.14
TSPAN4-208ENST00000409531 KRTAP3-3Q9BYR6 98 aa7.9□□□□□ -1.14
TSPAN4-208ENST00000409531 ATP5EP56381 51 aaPredicted RBP7.88□□□□□ -1.15
TSPAN4-208ENST00000409531 CHKB-CPT1BH3BT56 60 aa7.87□□□□□ -1.15
TSPAN4-208ENST00000409531 MT2AP02795 61 aa7.87□□□□□ -1.15
TSPAN4-208ENST00000409531 PCP4P48539 62 aa7.85□□□□□ -1.15
TSPAN4-208ENST00000409531 TMEM258P61165 79 aa7.85□□□□□ -1.15
TSPAN4-208ENST00000409531 SPTSSBQ8NFR3 76 aa7.85□□□□□ -1.15
TSPAN4-208ENST00000409531 SSPOA2VEC9 5147 aa7.83□□□□□ -1.16
TSPAN4-208ENST00000409531 COA5Q86WW8 74 aa7.81□□□□□ -1.16
TSPAN4-208ENST00000409531 USH2AO75445 5202 aa7.81□□□□□ -1.16
TSPAN4-208ENST00000409531 KRTAP10-10P60014 251 aa7.8□□□□□ -1.16
TSPAN4-208ENST00000409531 MT1FP04733 61 aa7.79□□□□□ -1.16
TSPAN4-208ENST00000409531 H0YAA0 97 aa7.73□□□□□ -1.17
TSPAN4-208ENST00000409531 KRTAP9-3Q9BYQ3 159 aa7.73□□□□□ -1.17
TSPAN4-208ENST00000409531 FCGBPQ9Y6R7 5405 aaPredicted RBP7.71□□□□□ -1.18
TSPAN4-208ENST00000409531 LCE2BO14633 110 aa7.65□□□□□ -1.18
TSPAN4-208ENST00000409531 ADM2Q7Z4H4 148 aa7.64□□□□□ -1.19
TSPAN4-208ENST00000409531 SYNE2Q8WXH0 6885 aaKnown RBP7.6□□□□□ -1.19
TSPAN4-208ENST00000409531 SERP1Q9Y6X1 66 aa7.6□□□□□ -1.19
TSPAN4-208ENST00000409531 KRTAP19-1Q8IUB9 90 aa7.56□□□□□ -1.2
TSPAN4-208ENST00000409531 CRIPTQ9P021 101 aa7.55□□□□□ -1.2
TSPAN4-208ENST00000409531 MACF1Q9UPN3 7388 aaKnown RBP7.55□□□□□ -1.2
TSPAN4-208ENST00000409531 SEC61GP60059 68 aa7.53□□□□□ -1.2
TSPAN4-208ENST00000409531 KRTAP3-2Q9BYR7 98 aa7.52□□□□□ -1.21
TSPAN4-208ENST00000409531 P0C880 135 aa7.51□□□□□ -1.21
TSPAN4-208ENST00000409531 SPRR2GQ9BYE4 73 aa7.44□□□□□ -1.22
TSPAN4-208ENST00000409531 R4GN34 69 aa7.44□□□□□ -1.22
TSPAN4-208ENST00000409531 A0A1B0GU69 56 aa7.43□□□□□ -1.22
TSPAN4-208ENST00000409531 RPS28P62857 69 aaKnown RBP7.4□□□□□ -1.22
TSPAN4-208ENST00000409531 PRR15LQ9BU68 103 aa7.4□□□□□ -1.22
TSPAN4-208ENST00000409531 LINC01558Q9Y6Z2 57 aa7.4□□□□□ -1.22
TSPAN4-208ENST00000409531 M0QZ58 72 aa7.38□□□□□ -1.23
TSPAN4-208ENST00000409531 KRTAP19-6Q3LI70 58 aa7.36□□□□□ -1.23
TSPAN4-208ENST00000409531 V9GYY9 64 aa7.35□□□□□ -1.23
TSPAN4-208ENST00000409531 SMIM26A0A096LP01 95 aa7.34□□□□□ -1.23
TSPAN4-208ENST00000409531 A0A1B0GU33 70 aa7.31□□□□□ -1.24
TSPAN4-208ENST00000409531 KRTAP19-8Q3LI54 63 aa7.29□□□□□ -1.24
TSPAN4-208ENST00000409531 Q1T7F1 81 aa7.28□□□□□ -1.24
TSPAN4-208ENST00000409531 Q5VV11 94 aa7.27□□□□□ -1.24
TSPAN4-208ENST00000409531 KRTAP6-3Q3LI67 103 aa7.26□□□□□ -1.25
TSPAN4-208ENST00000409531 LINC01554Q52M75 96 aa7.24□□□□□ -1.25
TSPAN4-208ENST00000409531 MT1BP07438 61 aa7.21□□□□□ -1.26
TSPAN4-208ENST00000409531 KRTAP13-4Q3LI77 160 aa7.21□□□□□ -1.26
TSPAN4-208ENST00000409531 NEBP20929 6669 aa7.18□□□□□ -1.26
TSPAN4-208ENST00000409531 SPATA8Q6RVD6 105 aa7.17□□□□□ -1.26
TSPAN4-208ENST00000409531 PSPHP1O15172 72 aa7.16□□□□□ -1.26
TSPAN4-208ENST00000409531 PLAC4Q8WY50 150 aa7.15□□□□□ -1.26
TSPAN4-208ENST00000409531 A6NN06 94 aa7.14□□□□□ -1.27
TSPAN4-208ENST00000409531 UQCR11O14957 56 aa7.14□□□□□ -1.27
TSPAN4-208ENST00000409531 A0A0D9SG42 100 aa7.08□□□□□ -1.28
TSPAN4-208ENST00000409531 MUC12Q9UKN1 5478 aa7.03□□□□□ -1.28
TSPAN4-208ENST00000409531 KRTAP10-5P60370 271 aa7.02□□□□□ -1.28
TSPAN4-208ENST00000409531 KRTAP20-1Q3LI63 56 aa7.02□□□□□ -1.28
TSPAN4-208ENST00000409531 MIR22HGQ0VDD5 57 aa7.01□□□□□ -1.29
TSPAN4-208ENST00000409531 A8MU10 97 aa7□□□□□ -1.29
TSPAN4-208ENST00000409531 A6NED7 52 aa6.98□□□□□ -1.29
TSPAN4-208ENST00000409531 SPINT4Q6UDR6 99 aa6.97□□□□□ -1.29
TSPAN4-208ENST00000409531 PRO2289Q9P1D8 64 aa6.96□□□□□ -1.3
TSPAN4-208ENST00000409531 KRTAP12-1P59990 96 aa6.95□□□□□ -1.3
TSPAN4-208ENST00000409531 CAMK2N1Q7Z7J9 78 aa6.92□□□□□ -1.3
TSPAN4-208ENST00000409531 KRTAP12-2P59991 146 aa6.9□□□□□ -1.3
TSPAN4-208ENST00000409531 MT1XP80297 61 aa6.88□□□□□ -1.31
TSPAN4-208ENST00000409531 K7ERS5 55 aa6.83□□□□□ -1.32
TSPAN4-208ENST00000409531 CDC42SE1Q9NRR8 79 aa6.79□□□□□ -1.32
TSPAN4-208ENST00000409531 MDN1Q9NU22 5596 aa6.74□□□□□ -1.33
TSPAN4-208ENST00000409531 KRTAP5-9P26371 169 aa6.72□□□□□ -1.33
TSPAN4-208ENST00000409531 KMT2DO14686 5537 aa6.7□□□□□ -1.34
TSPAN4-208ENST00000409531 KRTAP2-3P0C7H8 128 aa6.67□□□□□ -1.34
TSPAN4-208ENST00000409531 KRTAP2-4Q9BYR9 128 aa6.67□□□□□ -1.34
TSPAN4-208ENST00000409531 BRK1Q8WUW1 75 aa6.59□□□□□ -1.35
TSPAN4-208ENST00000409531 C10orf95Q9H7T3 257 aa6.58□□□□□ -1.36
TSPAN4-208ENST00000409531 KRTAP10-7P60409 375 aaPredicted RBP6.57□□□□□ -1.36
TSPAN4-208ENST00000409531 KRTAP10-12P60413 245 aa6.55□□□□□ -1.36
TSPAN4-208ENST00000409531 TNP1P09430 55 aa6.52□□□□□ -1.37
TSPAN4-208ENST00000409531 KRTAP8-1Q8IUC2 63 aa6.5□□□□□ -1.37
TSPAN4-208ENST00000409531 SPRR2FQ96RM1 72 aa6.48□□□□□ -1.37
TSPAN4-208ENST00000409531 KRTAP4-8A0A0G2JLE6 195 aa6.47□□□□□ -1.37
TSPAN4-208ENST00000409531 KRTAP4-8Q9BYQ9 185 aa6.47□□□□□ -1.37
TSPAN4-208ENST00000409531 SPRR2EP22531 72 aa6.43□□□□□ -1.38
TSPAN4-208ENST00000409531 SPRR2BP35325 72 aa6.43□□□□□ -1.38
TSPAN4-208ENST00000409531 SPRR2AP35326 72 aa6.43□□□□□ -1.38
TSPAN4-208ENST00000409531 ROMO1P60602 79 aa6.42□□□□□ -1.38
TSPAN4-208ENST00000409531 KRTAP25-1Q3LHN0 102 aa6.42□□□□□ -1.38
TSPAN4-208ENST00000409531 KRTAP2-2Q9BYT5 123 aa6.42□□□□□ -1.38
TSPAN4-208ENST00000409531 KRTAP2-1Q9BYU5 128 aa6.42□□□□□ -1.38
TSPAN4-208ENST00000409531 LCE1AQ5T7P2 110 aa6.29□□□□□ -1.4
TSPAN4-208ENST00000409531 GPR98Q8WXG9 6306 aa6.28□□□□□ -1.4
TSPAN4-208ENST00000409531 PRO0628Q9UI54 55 aa6.26□□□□□ -1.41
TSPAN4-208ENST00000409531 LCE3AQ5TA76 89 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms