RNA–Protein interactions for RNA: ENST00000350034.4

TRIM55-203, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,177 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-203ENST00000350034 Q75L30 129 aa3.74□□□□□ -1.81
TRIM55-203ENST00000350034 COA5Q86WW8 74 aa3.74□□□□□ -1.81
TRIM55-203ENST00000350034 DMAC1Q96GE9 116 aa3.73□□□□□ -1.81
TRIM55-203ENST00000350034 KRTAP4-9Q9BYQ8 210 aa3.73□□□□□ -1.81
TRIM55-203ENST00000350034 IGKV2D-30A0A075B6S6 120 aa3.72□□□□□ -1.81
TRIM55-203ENST00000350034 C4orf26Q17RF5 130 aa3.72□□□□□ -1.81
TRIM55-203ENST00000350034 KRTAP4-2Q9BYR5 136 aa3.72□□□□□ -1.81
TRIM55-203ENST00000350034 Q1T7F1 81 aa3.71□□□□□ -1.82
TRIM55-203ENST00000350034 C7orf65Q6ZTY9 151 aa3.71□□□□□ -1.82
TRIM55-203ENST00000350034 TNXBP22105 4242 aa3.69□□□□□ -1.82
TRIM55-203ENST00000350034 ACYP2P14621 99 aa3.69□□□□□ -1.82
TRIM55-203ENST00000350034 RPL37P61927 97 aaKnown RBP3.68□□□□□ -1.82
TRIM55-203ENST00000350034 MPLKIPQ8TAP9 179 aa3.68□□□□□ -1.82
TRIM55-203ENST00000350034 FAT3Q8TDW7 4589 aa3.67□□□□□ -1.82
TRIM55-203ENST00000350034 V9GYY9 64 aa3.67□□□□□ -1.82
TRIM55-203ENST00000350034 LRP1Q07954 4544 aaKnown RBP3.67□□□□□ -1.82
TRIM55-203ENST00000350034 SPINK7P58062 85 aa3.66□□□□□ -1.82
TRIM55-203ENST00000350034 A8MUN3 132 aa3.65□□□□□ -1.83
TRIM55-203ENST00000350034 LINC01558Q9Y6Z2 57 aa3.64□□□□□ -1.83
TRIM55-203ENST00000350034 TPRXLQ17RH7 258 aa3.63□□□□□ -1.83
TRIM55-203ENST00000350034 ATP11AUNQ6ZP68 121 aa3.63□□□□□ -1.83
TRIM55-203ENST00000350034 KRTAP3-1Q9BYR8 98 aa3.63□□□□□ -1.83
TRIM55-203ENST00000350034 CHKB-CPT1BH3BT56 60 aa3.61□□□□□ -1.83
TRIM55-203ENST00000350034 Q5VV11 94 aa3.61□□□□□ -1.83
TRIM55-203ENST00000350034 PSPHP1O15172 72 aa3.6□□□□□ -1.83
TRIM55-203ENST00000350034 COX6B2Q6YFQ2 88 aa3.6□□□□□ -1.83
TRIM55-203ENST00000350034 PRR15LQ9BU68 103 aa3.58□□□□□ -1.84
TRIM55-203ENST00000350034 KRTAP4-11Q9BYQ6 195 aa3.56□□□□□ -1.84
TRIM55-203ENST00000350034 SSPOA2VEC9 5147 aa3.55□□□□□ -1.84
TRIM55-203ENST00000350034 LCE4AQ5TA78 99 aa3.55□□□□□ -1.84
TRIM55-203ENST00000350034 SPTSSBQ8NFR3 76 aa3.53□□□□□ -1.84
TRIM55-203ENST00000350034 PRO0628Q9UI54 55 aa3.53□□□□□ -1.84
TRIM55-203ENST00000350034 BRK1Q8WUW1 75 aa3.52□□□□□ -1.85
TRIM55-203ENST00000350034 A0A1B0GU69 56 aa3.51□□□□□ -1.85
TRIM55-203ENST00000350034 SEC61BP60468 96 aaKnown RBP3.49□□□□□ -1.85
TRIM55-203ENST00000350034 LCA10Q71F78 164 aa3.49□□□□□ -1.85
TRIM55-203ENST00000350034 NEBP20929 6669 aa3.48□□□□□ -1.85
TRIM55-203ENST00000350034 A6NED7 52 aa3.48□□□□□ -1.85
TRIM55-203ENST00000350034 A8MU10 97 aa3.47□□□□□ -1.85
TRIM55-203ENST00000350034 H1FX-AS1Q4G0G2 97 aa3.47□□□□□ -1.85
TRIM55-203ENST00000350034 CDC42SE1Q9NRR8 79 aa3.47□□□□□ -1.85
TRIM55-203ENST00000350034 KRTAP4-1Q9BYQ7 146 aa3.45□□□□□ -1.86
TRIM55-203ENST00000350034 SYNE2Q8WXH0 6885 aaKnown RBP3.44□□□□□ -1.86
TRIM55-203ENST00000350034 SEC61GP60059 68 aa3.44□□□□□ -1.86
TRIM55-203ENST00000350034 SPATA8Q6RVD6 105 aa3.44□□□□□ -1.86
TRIM55-203ENST00000350034 RBM12B-AS1Q9P1G2 102 aa3.44□□□□□ -1.86
TRIM55-203ENST00000350034 S4R3F8 94 aa3.44□□□□□ -1.86
TRIM55-203ENST00000350034 KRTAP5-3Q6L8H2 238 aa3.43□□□□□ -1.86
TRIM55-203ENST00000350034 GPR98Q8WXG9 6306 aa3.42□□□□□ -1.86
TRIM55-203ENST00000350034 UQCR11O14957 56 aa3.42□□□□□ -1.86
TRIM55-203ENST00000350034 KRTAP10-6P60371 365 aaPredicted RBP3.4□□□□□ -1.87
TRIM55-203ENST00000350034 MIR22HGQ0VDD5 57 aa3.4□□□□□ -1.87
TRIM55-203ENST00000350034 KRTAP19-2Q3LHN2 52 aa3.4□□□□□ -1.87
TRIM55-203ENST00000350034 LPAP08519 4548 aa3.39□□□□□ -1.87
TRIM55-203ENST00000350034 A0A1B0GU33 70 aa3.38□□□□□ -1.87
TRIM55-203ENST00000350034 MUC17Q685J3 4493 aa3.37□□□□□ -1.87
TRIM55-203ENST00000350034 CSAG1Q6PB30 78 aa3.37□□□□□ -1.87
TRIM55-203ENST00000350034 H0YAA0 97 aa3.36□□□□□ -1.87
TRIM55-203ENST00000350034 KRTAP20-1Q3LI63 56 aa3.36□□□□□ -1.87
TRIM55-203ENST00000350034 LCE5AQ5TCM9 118 aa3.36□□□□□ -1.87
TRIM55-203ENST00000350034 A6NN06 94 aa3.35□□□□□ -1.87
TRIM55-203ENST00000350034 PMAIP1Q13794 54 aa3.33□□□□□ -1.88
TRIM55-203ENST00000350034 MACF1Q9UPN3 7388 aaKnown RBP3.32□□□□□ -1.88
TRIM55-203ENST00000350034 P0C880 135 aa3.32□□□□□ -1.88
TRIM55-203ENST00000350034 KRTAP13-4Q3LI77 160 aa3.31□□□□□ -1.88
TRIM55-203ENST00000350034 ADM2Q7Z4H4 148 aa3.31□□□□□ -1.88
TRIM55-203ENST00000350034 KRTAP9-8Q9BYQ0 159 aa3.3□□□□□ -1.88
TRIM55-203ENST00000350034 KRTAP9-3Q9BYQ3 159 aa3.28□□□□□ -1.88
TRIM55-203ENST00000350034 USH2AO75445 5202 aa3.27□□□□□ -1.89
TRIM55-203ENST00000350034 M0QZ58 72 aa3.26□□□□□ -1.89
TRIM55-203ENST00000350034 FCGBPQ9Y6R7 5405 aaPredicted RBP3.24□□□□□ -1.89
TRIM55-203ENST00000350034 KTN1-AS1Q86SY8 53 aa3.24□□□□□ -1.89
TRIM55-203ENST00000350034 A0A0D9SG42 100 aa3.2□□□□□ -1.9
TRIM55-203ENST00000350034 K7ERS5 55 aa3.2□□□□□ -1.9
TRIM55-203ENST00000350034 KRTAP12-1P59990 96 aa3.19□□□□□ -1.9
TRIM55-203ENST00000350034 KRTAP6-3Q3LI67 103 aa3.18□□□□□ -1.9
TRIM55-203ENST00000350034 KRTAP12-2P59991 146 aa3.17□□□□□ -1.9
TRIM55-203ENST00000350034 MT1HP80294 61 aa3.17□□□□□ -1.9
TRIM55-203ENST00000350034 R4GN34 69 aa3.16□□□□□ -1.9
TRIM55-203ENST00000350034 CRIPTQ9P021 101 aa3.14□□□□□ -1.91
TRIM55-203ENST00000350034 FLGP20930 4061 aaPredicted RBP3.14□□□□□ -1.91
TRIM55-203ENST00000350034 PRAC1Q96KF2 57 aa3.13□□□□□ -1.91
TRIM55-203ENST00000350034 ROMO1P60602 79 aa3.12□□□□□ -1.91
TRIM55-203ENST00000350034 SPINT4Q6UDR6 99 aa3.12□□□□□ -1.91
TRIM55-203ENST00000350034 LINC01554Q52M75 96 aa3.09□□□□□ -1.91
TRIM55-203ENST00000350034 M0R2T5 61 aa3.07□□□□□ -1.92
TRIM55-203ENST00000350034 MT2AP02795 61 aa3.07□□□□□ -1.92
TRIM55-203ENST00000350034 KRTAP19-4Q3LI73 84 aa3.07□□□□□ -1.92
TRIM55-203ENST00000350034 SPRR2GQ9BYE4 73 aa3.07□□□□□ -1.92
TRIM55-203ENST00000350034 MT1FP04733 61 aa3.05□□□□□ -1.92
TRIM55-203ENST00000350034 KRTAP25-1Q3LHN0 102 aa3.05□□□□□ -1.92
TRIM55-203ENST00000350034 MUC12Q9UKN1 5478 aa3.05□□□□□ -1.92
TRIM55-203ENST00000350034 KMT2DO14686 5537 aa3.05□□□□□ -1.92
TRIM55-203ENST00000350034 C10orf95Q9H7T3 257 aa3.02□□□□□ -1.93
TRIM55-203ENST00000350034 KRTAP2-3P0C7H8 128 aa3.01□□□□□ -1.93
TRIM55-203ENST00000350034 KRTAP10-10P60014 251 aa3.01□□□□□ -1.93
TRIM55-203ENST00000350034 KRTAP2-4Q9BYR9 128 aa3.01□□□□□ -1.93
TRIM55-203ENST00000350034 KRTAP19-8Q3LI54 63 aa2.99□□□□□ -1.93
TRIM55-203ENST00000350034 CAMK2N1Q7Z7J9 78 aa2.97□□□□□ -1.93
TRIM55-203ENST00000350034 MT1BP07438 61 aa2.94□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 104.5 ms