RNA–Protein interactions for RNA: ENST00000327908.3

LRIT3-201, Transcript of leucine rich repeat, Ig-like and transmembrane domains 3, humanhuman

TSL 2 BASIC

Gene LRIT3, Length 3,781 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT3-201ENST00000327908 SNURFQ9Y675 71 aa2.56□□□□□ -2
LRIT3-201ENST00000327908 CRIPTQ9P021 101 aa2.56□□□□□ -2
LRIT3-201ENST00000327908 KRTAP19-2Q3LHN2 52 aa2.54□□□□□ -2
LRIT3-201ENST00000327908 H7BZZ5 65 aa2.54□□□□□ -2
LRIT3-201ENST00000327908 SEC61GP60059 68 aa2.54□□□□□ -2
LRIT3-201ENST00000327908 MT1HP80294 61 aa2.53□□□□□ -2
LRIT3-201ENST00000327908 LCE2CQ5TA81 110 aa2.53□□□□□ -2.01
LRIT3-201ENST00000327908 V9GYY9 64 aa2.52□□□□□ -2.01
LRIT3-201ENST00000327908 LCE2AQ5TA79 106 aaPredicted RBP2.52□□□□□ -2.01
LRIT3-201ENST00000327908 PRR15LQ9BU68 103 aa2.52□□□□□ -2.01
LRIT3-201ENST00000327908 COA5Q86WW8 74 aa2.51□□□□□ -2.01
LRIT3-201ENST00000327908 SERP1Q9Y6X1 66 aa2.5□□□□□ -2.01
LRIT3-201ENST00000327908 LCA10Q71F78 164 aa2.5□□□□□ -2.01
LRIT3-201ENST00000327908 KRTAP3-1Q9BYR8 98 aa2.5□□□□□ -2.01
LRIT3-201ENST00000327908 KRTAP10-6P60371 365 aaPredicted RBP2.49□□□□□ -2.01
LRIT3-201ENST00000327908 KRTAP4-8A0A0G2JLE6 195 aa2.48□□□□□ -2.01
LRIT3-201ENST00000327908 KRTAP4-7Q9BYR0 210 aa2.48□□□□□ -2.01
LRIT3-201ENST00000327908 LORP23490 312 aaPredicted RBP2.46□□□□□ -2.02
LRIT3-201ENST00000327908 RPS28P62857 69 aaKnown RBP2.45□□□□□ -2.02
LRIT3-201ENST00000327908 M0QZ58 72 aa2.45□□□□□ -2.02
LRIT3-201ENST00000327908 KRTAP9-2Q9BYQ4 174 aa2.45□□□□□ -2.02
LRIT3-201ENST00000327908 LRP2P98164 4655 aa2.44□□□□□ -2.02
LRIT3-201ENST00000327908 KRTAP10-10P60014 251 aa2.44□□□□□ -2.02
LRIT3-201ENST00000327908 SMIM26A0A096LP01 95 aa2.43□□□□□ -2.02
LRIT3-201ENST00000327908 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.43□□□□□ -2.02
LRIT3-201ENST00000327908 Q5VV11 94 aa2.43□□□□□ -2.02
LRIT3-201ENST00000327908 LPAP08519 4548 aa2.42□□□□□ -2.02
LRIT3-201ENST00000327908 ADM2Q7Z4H4 148 aa2.42□□□□□ -2.02
LRIT3-201ENST00000327908 A0A1B0GU69 56 aa2.42□□□□□ -2.02
LRIT3-201ENST00000327908 KRTAP9-6A0A140TA67 174 aa2.41□□□□□ -2.02
LRIT3-201ENST00000327908 LINC01558Q9Y6Z2 57 aa2.41□□□□□ -2.02
LRIT3-201ENST00000327908 RNF213Q63HN8 5207 aa2.41□□□□□ -2.02
LRIT3-201ENST00000327908 MT2AP02795 61 aa2.41□□□□□ -2.02
LRIT3-201ENST00000327908 KRTAP9-8Q9BYQ0 159 aa2.4□□□□□ -2.03
LRIT3-201ENST00000327908 R4GN34 69 aa2.4□□□□□ -2.03
LRIT3-201ENST00000327908 A6NN06 94 aa2.39□□□□□ -2.03
LRIT3-201ENST00000327908 FLGP20930 4061 aaPredicted RBP2.39□□□□□ -2.03
LRIT3-201ENST00000327908 KRTAP5-3Q6L8H2 238 aa2.38□□□□□ -2.03
LRIT3-201ENST00000327908 Q1T7F1 81 aa2.37□□□□□ -2.03
LRIT3-201ENST00000327908 SPRR2GQ9BYE4 73 aa2.37□□□□□ -2.03
LRIT3-201ENST00000327908 A0A1B0GU33 70 aa2.37□□□□□ -2.03
LRIT3-201ENST00000327908 PLAC4Q8WY50 150 aa2.36□□□□□ -2.03
LRIT3-201ENST00000327908 K7ERS5 55 aa2.35□□□□□ -2.03
LRIT3-201ENST00000327908 LCE2BO14633 110 aa2.35□□□□□ -2.03
LRIT3-201ENST00000327908 MT1FP04733 61 aa2.35□□□□□ -2.03
LRIT3-201ENST00000327908 UQCR11O14957 56 aa2.35□□□□□ -2.03
LRIT3-201ENST00000327908 KRTAP19-8Q3LI54 63 aa2.34□□□□□ -2.03
LRIT3-201ENST00000327908 KRTAP4-12Q9BQ66 201 aa2.34□□□□□ -2.03
LRIT3-201ENST00000327908 A0A0A0MQY5 61 aa2.34□□□□□ -2.03
LRIT3-201ENST00000327908 KRTAP9-3Q9BYQ3 159 aa2.34□□□□□ -2.03
LRIT3-201ENST00000327908 KRTAP4-9Q9BYQ8 210 aa2.34□□□□□ -2.03
LRIT3-201ENST00000327908 KRTAP9-9Q9BYP9 154 aa2.34□□□□□ -2.04
LRIT3-201ENST00000327908 KRTAP9-4Q9BYQ2 154 aa2.34□□□□□ -2.04
LRIT3-201ENST00000327908 PRO2289Q9P1D8 64 aa2.33□□□□□ -2.04
LRIT3-201ENST00000327908 FAT4Q6V0I7 4981 aa2.32□□□□□ -2.04
LRIT3-201ENST00000327908 KRTAP4-2Q9BYR5 136 aa2.32□□□□□ -2.04
LRIT3-201ENST00000327908 UBR4Q5T4S7 5183 aa2.32□□□□□ -2.04
LRIT3-201ENST00000327908 A8MU10 97 aa2.31□□□□□ -2.04
LRIT3-201ENST00000327908 P0C880 135 aa2.31□□□□□ -2.04
LRIT3-201ENST00000327908 PRO0628Q9UI54 55 aa2.29□□□□□ -2.04
LRIT3-201ENST00000327908 MIR22HGQ0VDD5 57 aa2.28□□□□□ -2.04
LRIT3-201ENST00000327908 KRTAP19-1Q8IUB9 90 aa2.28□□□□□ -2.04
LRIT3-201ENST00000327908 A6NED7 52 aa2.26□□□□□ -2.05
LRIT3-201ENST00000327908 LCE1DQ5T752 114 aa2.26□□□□□ -2.05
LRIT3-201ENST00000327908 BRK1Q8WUW1 75 aa2.26□□□□□ -2.05
LRIT3-201ENST00000327908 SPATA8Q6RVD6 105 aa2.26□□□□□ -2.05
LRIT3-201ENST00000327908 KRTAP19-6Q3LI70 58 aa2.26□□□□□ -2.05
LRIT3-201ENST00000327908 CAMK2N1Q7Z7J9 78 aa2.25□□□□□ -2.05
LRIT3-201ENST00000327908 LINC01554Q52M75 96 aa2.25□□□□□ -2.05
LRIT3-201ENST00000327908 CRCT1Q9UGL9 99 aa2.25□□□□□ -2.05
LRIT3-201ENST00000327908 PSPHP1O15172 72 aa2.24□□□□□ -2.05
LRIT3-201ENST00000327908 LCE3BQ5TA77 95 aa2.24□□□□□ -2.05
LRIT3-201ENST00000327908 CDC42SE1Q9NRR8 79 aa2.23□□□□□ -2.05
LRIT3-201ENST00000327908 MT1BP07438 61 aa2.23□□□□□ -2.05
LRIT3-201ENST00000327908 HMCN1Q96RW7 5635 aa2.22□□□□□ -2.05
LRIT3-201ENST00000327908 KRTAP10-5P60370 271 aa2.22□□□□□ -2.05
LRIT3-201ENST00000327908 SPINT4Q6UDR6 99 aa2.21□□□□□ -2.06
LRIT3-201ENST00000327908 A0A0D9SG42 100 aa2.2□□□□□ -2.06
LRIT3-201ENST00000327908 KRTAP23-1A1A580 65 aa2.19□□□□□ -2.06
LRIT3-201ENST00000327908 KRTAP12-1P59990 96 aa2.19□□□□□ -2.06
LRIT3-201ENST00000327908 KRTAP12-2P59991 146 aa2.18□□□□□ -2.06
LRIT3-201ENST00000327908 KRTAP13-4Q3LI77 160 aa2.18□□□□□ -2.06
LRIT3-201ENST00000327908 TNP1P09430 55 aa2.16□□□□□ -2.06
LRIT3-201ENST00000327908 KRTAP25-1Q3LHN0 102 aa2.16□□□□□ -2.06
LRIT3-201ENST00000327908 PMAIP1Q13794 54 aa2.15□□□□□ -2.06
LRIT3-201ENST00000327908 MT1XP80297 61 aa2.12□□□□□ -2.07
LRIT3-201ENST00000327908 MUC2Q02817 5179 aa2.12□□□□□ -2.07
LRIT3-201ENST00000327908 PP632Q6XCG6 107 aa2.11□□□□□ -2.07
LRIT3-201ENST00000327908 C10orf95Q9H7T3 257 aa2.11□□□□□ -2.07
LRIT3-201ENST00000327908 ROMO1P60602 79 aa2.11□□□□□ -2.07
LRIT3-201ENST00000327908 KRTAP4-11Q9BYQ6 195 aa2.1□□□□□ -2.07
LRIT3-201ENST00000327908 KRTAP19-4Q3LI73 84 aa2.09□□□□□ -2.07
LRIT3-201ENST00000327908 KTN1-AS1Q86SY8 53 aa2.09□□□□□ -2.08
LRIT3-201ENST00000327908 KRTAP10-12P60413 245 aa2.08□□□□□ -2.08
LRIT3-201ENST00000327908 KRTAP6-3Q3LI67 103 aa2.07□□□□□ -2.08
LRIT3-201ENST00000327908 PRAC1Q96KF2 57 aa2.06□□□□□ -2.08
LRIT3-201ENST00000327908 KRTAP9-7A8MTY7 169 aa2.04□□□□□ -2.08
LRIT3-201ENST00000327908 KRTAP8-1Q8IUC2 63 aa2.04□□□□□ -2.08
LRIT3-201ENST00000327908 USH2AO75445 5202 aa2.01□□□□□ -2.09
LRIT3-201ENST00000327908 KRTAP5-9P26371 169 aa2□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms