RNA–Protein interactions for RNA: ENSMUST00000115537.1

Col28a1-201, Transcript of Collagen alpha-1(XXVIII) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col28a1, Length 4,230 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col28a1-201ENSMUST00000115537 Spink2Q8BMY7 86 aa7.07□□□□□ -1.28
Col28a1-201ENSMUST00000115537 Pgpep1Q9ESW8 209 aa7.07□□□□□ -1.28
Col28a1-201ENSMUST00000115537 GlmpQ9JHJ3 404 aa7.07□□□□□ -1.28
Col28a1-201ENSMUST00000115537 Ighv8-8A0A0A6YXQ0 119 aa7.06□□□□□ -1.28
Col28a1-201ENSMUST00000115537 Tmem262D3Z338 116 aa7.06□□□□□ -1.28
Col28a1-201ENSMUST00000115537 Olfr748E9Q9Z0 307 aa7.06□□□□□ -1.28
Col28a1-201ENSMUST00000115537 Gm21974F6W3F3 119 aa7.06□□□□□ -1.28
Col28a1-201ENSMUST00000115537 PolP10400 120 aa7.06□□□□□ -1.28
Col28a1-201ENSMUST00000115537 MycbQ6P8Z1 170 aa7.06□□□□□ -1.28
Col28a1-201ENSMUST00000115537 Stpg1Q9D2F5 341 aa7.06□□□□□ -1.28
Col28a1-201ENSMUST00000115537 Gm21983D6RFS9 131 aa7.06□□□□□ -1.28
Col28a1-201ENSMUST00000115537 TcraP01849 138 aa7.06□□□□□ -1.28
Col28a1-201ENSMUST00000115537 Saa4P31532 130 aa7.06□□□□□ -1.28
Col28a1-201ENSMUST00000115537 Spsb3Q571F5 354 aa7.06□□□□□ -1.28
Col28a1-201ENSMUST00000115537 PdpnQ62011 172 aa7.06□□□□□ -1.28
Col28a1-201ENSMUST00000115537 Bles03Q8VD62 251 aa7.06□□□□□ -1.28
Col28a1-201ENSMUST00000115537 Olfr1199Q8VF94 310 aa7.06□□□□□ -1.28
Col28a1-201ENSMUST00000115537 Trav14n-2A0A0G2JDF5 121 aa7.06□□□□□ -1.28
Col28a1-201ENSMUST00000115537 Olfr235E9Q9Z6 312 aa7.06□□□□□ -1.28
Col28a1-201ENSMUST00000115537 PkigO70139 76 aa7.06□□□□□ -1.28
Col28a1-201ENSMUST00000115537 P01741 114 aa7.06□□□□□ -1.28
Col28a1-201ENSMUST00000115537 AtrQ9JKK8 2635 aa7.05□□□□□ -1.28
Col28a1-201ENSMUST00000115537 Ighv3-4A0A0A6YXF1 117 aa7.05□□□□□ -1.28
Col28a1-201ENSMUST00000115537 Ighv9-3A0A0B4J1J5 117 aa7.05□□□□□ -1.28
Col28a1-201ENSMUST00000115537 Iglc1A0A0G2JE99 106 aa7.05□□□□□ -1.28
Col28a1-201ENSMUST00000115537 Smim20D3Z7Q2 69 aa7.05□□□□□ -1.28
Col28a1-201ENSMUST00000115537 Nat8b-psE0CYC6 232 aa7.05□□□□□ -1.28
Col28a1-201ENSMUST00000115537 P01791 123 aa7.05□□□□□ -1.28
Col28a1-201ENSMUST00000115537 Cd27P41272 250 aa7.05□□□□□ -1.28
Col28a1-201ENSMUST00000115537 KncnQ307W7 124 aa7.05□□□□□ -1.28
Col28a1-201ENSMUST00000115537 Q5BN45 167 aa7.05□□□□□ -1.28
Col28a1-201ENSMUST00000115537 Tal2Q62282 108 aa7.05□□□□□ -1.28
Col28a1-201ENSMUST00000115537 Fmc1Q9CR13 113 aa7.05□□□□□ -1.28
Col28a1-201ENSMUST00000115537 Hbb-bsA8DUK4 147 aa7.05□□□□□ -1.28
Col28a1-201ENSMUST00000115537 Ccl25O35903 144 aa7.05□□□□□ -1.28
Col28a1-201ENSMUST00000115537 Hbb-b1P02088 147 aa7.05□□□□□ -1.28
Col28a1-201ENSMUST00000115537 Defa16P50714 93 aa7.05□□□□□ -1.28
Col28a1-201ENSMUST00000115537 Obox1Q9D350 204 aa7.05□□□□□ -1.28
Col28a1-201ENSMUST00000115537 Ighv1-37A0A0A6YW32 117 aa7.05□□□□□ -1.28
Col28a1-201ENSMUST00000115537 Cd209gD3Z5D4 194 aa7.05□□□□□ -1.28
Col28a1-201ENSMUST00000115537 Foxl2O88470 375 aa7.05□□□□□ -1.28
Col28a1-201ENSMUST00000115537 Higd1cQ76I25 96 aa7.05□□□□□ -1.28
Col28a1-201ENSMUST00000115537 Ttc9cQ810A3 171 aa7.05□□□□□ -1.28
Col28a1-201ENSMUST00000115537 Insig2Q91WG1 225 aa7.05□□□□□ -1.28
Col28a1-201ENSMUST00000115537 ArtnQ9Z0L2 224 aa7.05□□□□□ -1.28
Col28a1-201ENSMUST00000115537 DscamQ9ERC8 2013 aa7.05□□□□□ -1.28
Col28a1-201ENSMUST00000115537 Saa3P04918 122 aa7.04□□□□□ -1.28
Col28a1-201ENSMUST00000115537 Ccl12Q62401 104 aa7.04□□□□□ -1.28
Col28a1-201ENSMUST00000115537 RpeQ8VEE0 228 aa7.04□□□□□ -1.28
Col28a1-201ENSMUST00000115537 Ighv14-2A0A075B5R7 117 aa7.04□□□□□ -1.28
Col28a1-201ENSMUST00000115537 Igkv13-84A0A140T8N3 115 aa7.04□□□□□ -1.28
Col28a1-201ENSMUST00000115537 Ccl2P10148 148 aa7.04□□□□□ -1.28
Col28a1-201ENSMUST00000115537 Khdc1aQ3UWR2 166 aa7.04□□□□□ -1.28
Col28a1-201ENSMUST00000115537 Trav14d-1A0A075B6B1 121 aa7.04□□□□□ -1.28
Col28a1-201ENSMUST00000115537 Gm4792Q569Q2 183 aa7.04□□□□□ -1.28
Col28a1-201ENSMUST00000115537 TctaQ8VEA7 122 aa7.04□□□□□ -1.28
Col28a1-201ENSMUST00000115537 AY761184Q9D848 116 aa7.04□□□□□ -1.28
Col28a1-201ENSMUST00000115537 Them7Q9DCP4 223 aa7.04□□□□□ -1.28
Col28a1-201ENSMUST00000115537 Gm15294V9GXA7 121 aa7.04□□□□□ -1.28
Col28a1-201ENSMUST00000115537 Csn3P06796 181 aa7.03□□□□□ -1.28
Col28a1-201ENSMUST00000115537 LtaP09225 202 aa7.03□□□□□ -1.28
Col28a1-201ENSMUST00000115537 Tmem170bP86050 132 aa7.03□□□□□ -1.28
Col28a1-201ENSMUST00000115537 Chac1Q8R3J5 223 aa7.03□□□□□ -1.28
Col28a1-201ENSMUST00000115537 Ndufb3Q9CQZ6 104 aa7.03□□□□□ -1.28
Col28a1-201ENSMUST00000115537 Ighv1-39A0A075B5V5 117 aa7.03□□□□□ -1.28
Col28a1-201ENSMUST00000115537 Gm29644A0A087WPG2 191 aa7.03□□□□□ -1.28
Col28a1-201ENSMUST00000115537 Gm17359A0A0G2JEB7 487 aa7.03□□□□□ -1.28
Col28a1-201ENSMUST00000115537 Samd5Q3V1H9 173 aa7.03□□□□□ -1.28
Col28a1-201ENSMUST00000115537 Mrpl53Q9D1H8 118 aaKnown RBP7.03□□□□□ -1.28
Col28a1-201ENSMUST00000115537 Vmn1r63Q9EPT1 300 aa7.03□□□□□ -1.28
Col28a1-201ENSMUST00000115537 Znf385cA2A5E6 429 aa7.03□□□□□ -1.28
Col28a1-201ENSMUST00000115537 Rpl27aP14115 148 aaKnown RBP7.03□□□□□ -1.28
Col28a1-201ENSMUST00000115537 Taf15Q8BQ46 557 aaKnown RBP7.03□□□□□ -1.28
Col28a1-201ENSMUST00000115537 Ss18l2Q9D174 77 aa7.03□□□□□ -1.28
Col28a1-201ENSMUST00000115537 Igkv14-111A0A140T8P9 117 aa7.03□□□□□ -1.28
Col28a1-201ENSMUST00000115537 MdfiP70331 251 aa7.03□□□□□ -1.28
Col28a1-201ENSMUST00000115537 QrfpQ8CE23 124 aa7.03□□□□□ -1.28
Col28a1-201ENSMUST00000115537 OtorQ9JIE3 128 aa7.03□□□□□ -1.28
Col28a1-201ENSMUST00000115537 Egr4Q9WUF2 478 aa7.03□□□□□ -1.28
Col28a1-201ENSMUST00000115537 Brca2P97929 3329 aa7.02□□□□□ -1.29
Col28a1-201ENSMUST00000115537 Gm20708H3BKF4 155 aa7.02□□□□□ -1.29
Col28a1-201ENSMUST00000115537 P18530 117 aa7.02□□□□□ -1.29
Col28a1-201ENSMUST00000115537 Dtx1Q61010 627 aa7.02□□□□□ -1.29
Col28a1-201ENSMUST00000115537 Znrd1Q791N7 123 aa7.02□□□□□ -1.29
Col28a1-201ENSMUST00000115537 Olfr1243Q8VGM7 305 aa7.02□□□□□ -1.29
Col28a1-201ENSMUST00000115537 Slc25a39Q9D8K8 359 aa7.02□□□□□ -1.29
Col28a1-201ENSMUST00000115537 Zfp119aQ9JIC0 545 aa7.02□□□□□ -1.29
Col28a1-201ENSMUST00000115537 CicQ924A2 2510 aa7.02□□□□□ -1.29
Col28a1-201ENSMUST00000115537 Defb26Q30KN7 186 aa7.02□□□□□ -1.29
Col28a1-201ENSMUST00000115537 Tet1Q3URK3 2007 aaKnown RBP7.02□□□□□ -1.29
Col28a1-201ENSMUST00000115537 Gm5093E9PZB3 174 aa7.02□□□□□ -1.29
Col28a1-201ENSMUST00000115537 Gm11444F6QMA6 170 aa7.02□□□□□ -1.29
Col28a1-201ENSMUST00000115537 Gm6871L7N248 545 aa7.02□□□□□ -1.29
Col28a1-201ENSMUST00000115537 Gm10384Q3UQ87 92 aa7.02□□□□□ -1.29
Col28a1-201ENSMUST00000115537 Olfr317Q5NCD6 327 aa7.02□□□□□ -1.29
Col28a1-201ENSMUST00000115537 Vsig8Q6P3A4 417 aa7.02□□□□□ -1.29
Col28a1-201ENSMUST00000115537 GaptQ8CB93 157 aa7.02□□□□□ -1.29
Col28a1-201ENSMUST00000115537 Oxld1Q9CR10 201 aa7.02□□□□□ -1.29
Col28a1-201ENSMUST00000115537 Rchy1Q9CR50 261 aa7.02□□□□□ -1.29
Col28a1-201ENSMUST00000115537 Pax8Q00288 457 aa7.01□□□□□ -1.29
Retrieved 100 of 22,080 RNA–protein pairs in 36.4 ms