RNA–Protein interactions for RNA: ENSMUST00000098548.7

Scn1b-201, Transcript of Sodium channel subunit beta-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Scn1b, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1b-201ENSMUST00000098548 Igsf10Q3V1M1 2594 aa17.2■□□□□ 0.34
Scn1b-201ENSMUST00000098548 Ighv14-1A0A075B5R4 117 aa17.2■□□□□ 0.34
Scn1b-201ENSMUST00000098548 MymxQ2Q5T5 84 aa17.2■□□□□ 0.34
Scn1b-201ENSMUST00000098548 Col6a5A6H584 2640 aa17.19■□□□□ 0.34
Scn1b-201ENSMUST00000098548 Zfp930A0A1D5RM15 441 aa17.19■□□□□ 0.34
Scn1b-201ENSMUST00000098548 MsmbO08540 113 aa17.19■□□□□ 0.34
Scn1b-201ENSMUST00000098548 A930003A15RikQ3U552 87 aa17.19■□□□□ 0.34
Scn1b-201ENSMUST00000098548 Zfp248Q640N4 576 aa17.19■□□□□ 0.34
Scn1b-201ENSMUST00000098548 QrfpQ8CE23 124 aa17.19■□□□□ 0.34
Scn1b-201ENSMUST00000098548 9130204L05RikG3UWB8 92 aa17.19■□□□□ 0.34
Scn1b-201ENSMUST00000098548 Saa3P04918 122 aa17.19■□□□□ 0.34
Scn1b-201ENSMUST00000098548 Spink11Q09TK7 88 aa17.19■□□□□ 0.34
Scn1b-201ENSMUST00000098548 Rhox4gQ2MDF7 205 aa17.19■□□□□ 0.34
Scn1b-201ENSMUST00000098548 Ang6Q5GAN0 147 aa17.19■□□□□ 0.34
Scn1b-201ENSMUST00000098548 Aqp11Q8BHH1 271 aa17.19■□□□□ 0.34
Scn1b-201ENSMUST00000098548 Golt1bQ9CR60 138 aa17.19■□□□□ 0.34
Scn1b-201ENSMUST00000098548 Znf239P24399 201 aa17.18■□□□□ 0.34
Scn1b-201ENSMUST00000098548 Cd69P37217 199 aa17.18■□□□□ 0.34
Scn1b-201ENSMUST00000098548 Chchd1Q9CQA6 118 aa17.18■□□□□ 0.34
Scn1b-201ENSMUST00000098548 Olfr954Q9EQB6 314 aa17.18■□□□□ 0.34
Scn1b-201ENSMUST00000098548 Slc35b1P97858 322 aa17.17■□□□□ 0.34
Scn1b-201ENSMUST00000098548 Megf9Q8BH27 600 aa17.17■□□□□ 0.34
Scn1b-201ENSMUST00000098548 Nrn1Q8CFV4 142 aa17.17■□□□□ 0.34
Scn1b-201ENSMUST00000098548 Ms4a12A0A087WSB9 263 aa17.16■□□□□ 0.34
Scn1b-201ENSMUST00000098548 Pex7P97865 318 aa17.16■□□□□ 0.34
Scn1b-201ENSMUST00000098548 Slc35d2Q762D5 326 aa17.16■□□□□ 0.34
Scn1b-201ENSMUST00000098548 Q8CF25 301 aa17.16■□□□□ 0.34
Scn1b-201ENSMUST00000098548 Lyzl1Q9CPX3 148 aa17.16■□□□□ 0.34
Scn1b-201ENSMUST00000098548 Rchy1Q9CR50 261 aa17.16■□□□□ 0.34
Scn1b-201ENSMUST00000098548 Spcs1Q9D958 161 aa17.16■□□□□ 0.34
Scn1b-201ENSMUST00000098548 Vmn1r63Q9EPT1 300 aa17.16■□□□□ 0.34
Scn1b-201ENSMUST00000098548 NipblQ6KCD5 2798 aaKnown RBP17.16■□□□□ 0.34
Scn1b-201ENSMUST00000098548 Igkv4-57-1A0A075B5M4 119 aa17.15■□□□□ 0.34
Scn1b-201ENSMUST00000098548 Trav12d-3A0A075B6A4 115 aa17.15■□□□□ 0.34
Scn1b-201ENSMUST00000098548 Ighv1-52A0A0A6YXC3 117 aa17.15■□□□□ 0.34
Scn1b-201ENSMUST00000098548 A830031A19RikQ8BNT5 113 aa17.15■□□□□ 0.34
Scn1b-201ENSMUST00000098548 6030452D12RikQ8CD33 222 aa17.15■□□□□ 0.34
Scn1b-201ENSMUST00000098548 Q9D7E4 109 aa17.15■□□□□ 0.34
Scn1b-201ENSMUST00000098548 Spata3Q9D9T6 193 aa17.15■□□□□ 0.34
Scn1b-201ENSMUST00000098548 Trav16nA0A075B634 117 aa17.15■□□□□ 0.34
Scn1b-201ENSMUST00000098548 Vmn1r158G3UY92 307 aa17.15■□□□□ 0.34
Scn1b-201ENSMUST00000098548 Megf10Q6DIB5 1147 aa17.15■□□□□ 0.34
Scn1b-201ENSMUST00000098548 SriQ6P069 198 aa17.15■□□□□ 0.34
Scn1b-201ENSMUST00000098548 Tctex1d4Q8CDY7 219 aa17.15■□□□□ 0.34
Scn1b-201ENSMUST00000098548 Krtap26-1Q9D7N2 215 aa17.15■□□□□ 0.34
Scn1b-201ENSMUST00000098548 AplnrQ9WV08 377 aa17.15■□□□□ 0.34
Scn1b-201ENSMUST00000098548 Gm20379A0A087WR34 119 aa17.14■□□□□ 0.33
Scn1b-201ENSMUST00000098548 Vmn1r149E9PWL6 307 aa17.14■□□□□ 0.33
Scn1b-201ENSMUST00000098548 Vmn1r101E9Q365 307 aa17.14■□□□□ 0.33
Scn1b-201ENSMUST00000098548 Gm9602J3QPD5 205 aa17.14■□□□□ 0.33
Scn1b-201ENSMUST00000098548 BC100530Q497J0 97 aa17.14■□□□□ 0.33
Scn1b-201ENSMUST00000098548 Mapk1ip1Q9D7G9 263 aa17.14■□□□□ 0.33
Scn1b-201ENSMUST00000098548 Nbeal2Q6ZQA0 2742 aa17.14■□□□□ 0.33
Scn1b-201ENSMUST00000098548 Cox6b1P56391 86 aaKnown RBP17.13■□□□□ 0.33
Scn1b-201ENSMUST00000098548 Trdv2-2Q5R1A4 116 aa17.13■□□□□ 0.33
Scn1b-201ENSMUST00000098548 Tmem140Q8BGY5 185 aa17.13■□□□□ 0.33
Scn1b-201ENSMUST00000098548 Muc15Q8C6Z1 331 aa17.13■□□□□ 0.33
Scn1b-201ENSMUST00000098548 Rnf183Q8QZS5 190 aa17.13■□□□□ 0.33
Scn1b-201ENSMUST00000098548 Mcrip2Q9CQB2 160 aaKnown RBP17.13■□□□□ 0.33
Scn1b-201ENSMUST00000098548 Rpl11Q9CXW4 178 aaKnown RBP17.13■□□□□ 0.33
Scn1b-201ENSMUST00000098548 Q9DAB9 146 aa17.13■□□□□ 0.33
Scn1b-201ENSMUST00000098548 Ighv12-3A0A075B5T1 117 aa17.12■□□□□ 0.33
Scn1b-201ENSMUST00000098548 Tmem256Q5F285 113 aa17.12■□□□□ 0.33
Scn1b-201ENSMUST00000098548 Hspe1Q64433 102 aaKnown RBP17.12■□□□□ 0.33
Scn1b-201ENSMUST00000098548 Avpi1Q9D7H4 142 aa17.12■□□□□ 0.33
Scn1b-201ENSMUST00000098548 MNCb-2875Q9DCB3 74 aa17.12■□□□□ 0.33
Scn1b-201ENSMUST00000098548 Arl14eplQ3UKZ7 152 aa17.11■□□□□ 0.33
Scn1b-201ENSMUST00000098548 Q4KKZ1 196 aa17.11■□□□□ 0.33
Scn1b-201ENSMUST00000098548 Fam222aQ6PGH4 453 aa17.11■□□□□ 0.33
Scn1b-201ENSMUST00000098548 Olfr365Q8VFT2 312 aa17.11■□□□□ 0.33
Scn1b-201ENSMUST00000098548 Olfr983Q8VG90 315 aa17.11■□□□□ 0.33
Scn1b-201ENSMUST00000098548 Rbmxl2Q9DAE2 385 aaKnown RBP17.11■□□□□ 0.33
Scn1b-201ENSMUST00000098548 Tenm1Q9WTS4 2731 aa17.11■□□□□ 0.33
Scn1b-201ENSMUST00000098548 Hist1h2bfP10853 126 aa17.11■□□□□ 0.33
Scn1b-201ENSMUST00000098548 Fbxl7Q5BJ29 491 aa17.11■□□□□ 0.33
Scn1b-201ENSMUST00000098548 Hist1h2bbQ64475 126 aa17.11■□□□□ 0.33
Scn1b-201ENSMUST00000098548 Hist1h2bkQ8CGP1 126 aaKnown RBP17.11■□□□□ 0.33
Scn1b-201ENSMUST00000098548 Hist1h2bpQ8CGP2 126 aaKnown RBP17.11■□□□□ 0.33
Scn1b-201ENSMUST00000098548 Odf3Q920N1 254 aa17.11■□□□□ 0.33
Scn1b-201ENSMUST00000098548 UrahQ9CRB3 118 aa17.11■□□□□ 0.33
Scn1b-201ENSMUST00000098548 Borcs7Q9CRC6 105 aa17.11■□□□□ 0.33
Scn1b-201ENSMUST00000098548 Pdzd11Q9CZG9 140 aa17.11■□□□□ 0.33
Scn1b-201ENSMUST00000098548 RhohQ9D3G9 191 aa17.11■□□□□ 0.33
Scn1b-201ENSMUST00000098548 Nat6Q9R123 314 aa17.11■□□□□ 0.33
Scn1b-201ENSMUST00000098548 Gm36176A0A1W2P8D5 158 aa17.1■□□□□ 0.33
Scn1b-201ENSMUST00000098548 CtsgP28293 261 aa17.1■□□□□ 0.33
Scn1b-201ENSMUST00000098548 Pafah1b2Q61206 229 aa17.1■□□□□ 0.33
Scn1b-201ENSMUST00000098548 Arl11Q6P3A9 176 aa17.1■□□□□ 0.33
Scn1b-201ENSMUST00000098548 Ndufv3Q8BK30 104 aaKnown RBP17.1■□□□□ 0.33
Scn1b-201ENSMUST00000098548 Tmem241Q3UME2 297 aa17.09■□□□□ 0.33
Scn1b-201ENSMUST00000098548 Ucn2Q99ML8 113 aa17.09■□□□□ 0.33
Scn1b-201ENSMUST00000098548 Dynlrb2Q9DAJ5 96 aa17.09■□□□□ 0.33
Scn1b-201ENSMUST00000098548 GlmpQ9JHJ3 404 aa17.09■□□□□ 0.33
Scn1b-201ENSMUST00000098548 Ube2l6Q9QZU9 153 aa17.09■□□□□ 0.33
Scn1b-201ENSMUST00000098548 Igkv4-69A0A0B4J1I6 116 aa17.08■□□□□ 0.32
Scn1b-201ENSMUST00000098548 Gm10553J3QPF1 123 aa17.08■□□□□ 0.32
Scn1b-201ENSMUST00000098548 Vsig8Q6P3A4 417 aa17.08■□□□□ 0.32
Scn1b-201ENSMUST00000098548 Crip3Q6Q6R3 243 aa17.08■□□□□ 0.32
Scn1b-201ENSMUST00000098548 Ctxnd2A0A1B0GQX3 59 aa17.07■□□□□ 0.32
Scn1b-201ENSMUST00000098548 TcapO70548 167 aa17.07■□□□□ 0.32
Retrieved 100 of 22,080 RNA–protein pairs in 35.4 ms