RNA–Protein interactions for RNA: ENSMUST00000092971.12

Chd3-201, Transcript of Chromodomain helicase DNA-binding protein 3, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Chd3, Length 6,066 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Chd3-201ENSMUST00000092971 Cend1Q9JKC6 149 aa12.19□□□□□ -0.46
Chd3-201ENSMUST00000092971 Myo16Q5DU14 1919 aa12.18□□□□□ -0.46
Chd3-201ENSMUST00000092971 P01789 122 aa12.18□□□□□ -0.46
Chd3-201ENSMUST00000092971 Tmem89Q9DA04 169 aa12.18□□□□□ -0.46
Chd3-201ENSMUST00000092971 Igh-VJ558P01758 117 aa12.18□□□□□ -0.46
Chd3-201ENSMUST00000092971 VsirQ9D659 308 aa12.18□□□□□ -0.46
Chd3-201ENSMUST00000092971 P03980 138 aa12.18□□□□□ -0.46
Chd3-201ENSMUST00000092971 Nr2c2apQ3TV70 140 aa12.18□□□□□ -0.46
Chd3-201ENSMUST00000092971 Gm20730A0A075B5J6 119 aa12.17□□□□□ -0.46
Chd3-201ENSMUST00000092971 Smim10l1A0A087WNQ7 89 aa12.17□□□□□ -0.46
Chd3-201ENSMUST00000092971 Tex26Q0VB26 296 aa12.17□□□□□ -0.46
Chd3-201ENSMUST00000092971 ElaneQ3UP87 265 aa12.17□□□□□ -0.46
Chd3-201ENSMUST00000092971 Tnfrsf23Q9ER63 176 aa12.17□□□□□ -0.46
Chd3-201ENSMUST00000092971 P01793 123 aa12.17□□□□□ -0.46
Chd3-201ENSMUST00000092971 Tmem263Q9DAM7 115 aa12.17□□□□□ -0.46
Chd3-201ENSMUST00000092971 H2al1nQ497L1 109 aa12.17□□□□□ -0.46
Chd3-201ENSMUST00000092971 Wipf2Q6PEV3 440 aa12.17□□□□□ -0.46
Chd3-201ENSMUST00000092971 Taf15Q8BQ46 557 aaKnown RBP12.17□□□□□ -0.46
Chd3-201ENSMUST00000092971 Shank3Q4ACU6 1730 aa12.17□□□□□ -0.46
Chd3-201ENSMUST00000092971 Ccl21aP84444 133 aa12.17□□□□□ -0.46
Chd3-201ENSMUST00000092971 Ccl21bP86792 133 aa12.17□□□□□ -0.46
Chd3-201ENSMUST00000092971 Ccl21cP86793 133 aa12.17□□□□□ -0.46
Chd3-201ENSMUST00000092971 A530064D06RikQ8BNV8 229 aa12.17□□□□□ -0.46
Chd3-201ENSMUST00000092971 Col4a3Q9QZS0 1669 aa12.17□□□□□ -0.46
Chd3-201ENSMUST00000092971 Zcwpw2Q08EN7 125 aa12.17□□□□□ -0.46
Chd3-201ENSMUST00000092971 9430097D07RikQ8BS47 195 aa12.17□□□□□ -0.46
Chd3-201ENSMUST00000092971 Igkv1-122A0A140T8M9 119 aa12.16□□□□□ -0.46
Chd3-201ENSMUST00000092971 Gm15091B1AZM2 449 aa12.16□□□□□ -0.46
Chd3-201ENSMUST00000092971 MifP34884 115 aaKnown RBP12.16□□□□□ -0.46
Chd3-201ENSMUST00000092971 Q8BTC1 67 aa12.16□□□□□ -0.46
Chd3-201ENSMUST00000092971 Ly6g6dQ9Z1Q3 135 aa12.16□□□□□ -0.46
Chd3-201ENSMUST00000092971 Mapk1ip1Q9D7G9 263 aa12.16□□□□□ -0.46
Chd3-201ENSMUST00000092971 Ss18l2Q9D174 77 aa12.16□□□□□ -0.46
Chd3-201ENSMUST00000092971 Supt4h1bQ9Z199 117 aa12.16□□□□□ -0.46
Chd3-201ENSMUST00000092971 NynrinQ5DTZ0 1840 aa12.15□□□□□ -0.46
Chd3-201ENSMUST00000092971 BC048502Q80Y74 154 aa12.15□□□□□ -0.46
Chd3-201ENSMUST00000092971 Lypd1Q8BLC3 141 aa12.15□□□□□ -0.46
Chd3-201ENSMUST00000092971 4930415O20RikQ8CDT5 131 aa12.15□□□□□ -0.46
Chd3-201ENSMUST00000092971 Synj2bpQ9D6K5 145 aa12.15□□□□□ -0.46
Chd3-201ENSMUST00000092971 Adamtsl3G3UXC7 1706 aa12.15□□□□□ -0.46
Chd3-201ENSMUST00000092971 P01794 123 aa12.15□□□□□ -0.46
Chd3-201ENSMUST00000092971 Sdhaf1Q3U276 118 aa12.15□□□□□ -0.46
Chd3-201ENSMUST00000092971 P01738 130 aa12.15□□□□□ -0.46
Chd3-201ENSMUST00000092971 NpsP0C0P8 89 aa12.15□□□□□ -0.46
Chd3-201ENSMUST00000092971 Cd300eQ8K249 196 aa12.15□□□□□ -0.46
Chd3-201ENSMUST00000092971 Gm10762Q9CZN6 115 aa12.15□□□□□ -0.46
Chd3-201ENSMUST00000092971 Malrd1A2AJX4 2123 aa12.15□□□□□ -0.46
Chd3-201ENSMUST00000092971 9130213A22RikQ3V3T2 120 aa12.15□□□□□ -0.47
Chd3-201ENSMUST00000092971 Foxi1Q922I5 372 aa12.15□□□□□ -0.47
Chd3-201ENSMUST00000092971 Crlf1Q9JM58 425 aa12.15□□□□□ -0.47
Chd3-201ENSMUST00000092971 P01655 112 aa12.14□□□□□ -0.47
Chd3-201ENSMUST00000092971 Clec4b2Q67DU8 208 aa12.14□□□□□ -0.47
Chd3-201ENSMUST00000092971 Ndufa11Q9D8B4 141 aa12.14□□□□□ -0.47
Chd3-201ENSMUST00000092971 Trbv12-1A0A0B4J1H0 124 aa12.14□□□□□ -0.47
Chd3-201ENSMUST00000092971 Sigmar1O55242 223 aa12.14□□□□□ -0.47
Chd3-201ENSMUST00000092971 Gm10447Q3UQ92 135 aa12.14□□□□□ -0.47
Chd3-201ENSMUST00000092971 Tmem243B2RVB9 118 aa12.14□□□□□ -0.47
Chd3-201ENSMUST00000092971 Ube2bP63147 152 aa12.13□□□□□ -0.47
Chd3-201ENSMUST00000092971 Pygo1Q9D0P5 417 aa12.13□□□□□ -0.47
Chd3-201ENSMUST00000092971 Thsd7aQ69ZU6 1645 aa12.13□□□□□ -0.47
Chd3-201ENSMUST00000092971 Klf11Q8K1S5 502 aa12.13□□□□□ -0.47
Chd3-201ENSMUST00000092971 Gm10188Q3V432 135 aa12.13□□□□□ -0.47
Chd3-201ENSMUST00000092971 Gdf15Q9Z0J7 303 aa12.13□□□□□ -0.47
Chd3-201ENSMUST00000092971 Zfp648D3Z0W3 525 aa12.12□□□□□ -0.47
Chd3-201ENSMUST00000092971 P18528 98 aa12.12□□□□□ -0.47
Chd3-201ENSMUST00000092971 Foxc1Q61572 553 aa12.12□□□□□ -0.47
Chd3-201ENSMUST00000092971 Ighv1-55A0A075B5W6 117 aa12.12□□□□□ -0.47
Chd3-201ENSMUST00000092971 Trav14n-2A0A0G2JDF5 121 aa12.12□□□□□ -0.47
Chd3-201ENSMUST00000092971 Foxi3E0CZH3 425 aa12.12□□□□□ -0.47
Chd3-201ENSMUST00000092971 P01791 123 aa12.12□□□□□ -0.47
Chd3-201ENSMUST00000092971 Morn3Q8C5T4 241 aa12.12□□□□□ -0.47
Chd3-201ENSMUST00000092971 Prpf8Q99PV0 2335 aaKnown RBP12.12□□□□□ -0.47
Chd3-201ENSMUST00000092971 P01786 117 aa12.12□□□□□ -0.47
Chd3-201ENSMUST00000092971 P06330 118 aa12.12□□□□□ -0.47
Chd3-201ENSMUST00000092971 1700084M14RikB1AT01 78 aa12.12□□□□□ -0.47
Chd3-201ENSMUST00000092971 Gm27027S4R1M6 97 aa12.12□□□□□ -0.47
Chd3-201ENSMUST00000092971 Klk11Q9QYN3 276 aa12.11□□□□□ -0.47
Chd3-201ENSMUST00000092971 Ighv1-23A0A0A6YVW3 117 aa12.11□□□□□ -0.47
Chd3-201ENSMUST00000092971 Reg3gO09049 174 aa12.11□□□□□ -0.47
Chd3-201ENSMUST00000092971 P01739 132 aa12.11□□□□□ -0.47
Chd3-201ENSMUST00000092971 Zfp11P10751 647 aa12.11□□□□□ -0.47
Chd3-201ENSMUST00000092971 Pfn1P62962 140 aa12.11□□□□□ -0.47
Chd3-201ENSMUST00000092971 Abca4O35600 2310 aa12.11□□□□□ -0.47
Chd3-201ENSMUST00000092971 Baz2aQ91YE5 1889 aaKnown RBP12.11□□□□□ -0.47
Chd3-201ENSMUST00000092971 Mogat1Q91ZV4 335 aa12.1□□□□□ -0.47
Chd3-201ENSMUST00000092971 Msrb2Q78J03 175 aa12.1□□□□□ -0.47
Chd3-201ENSMUST00000092971 AcacaQ5SWU9 2345 aa12.1□□□□□ -0.47
Chd3-201ENSMUST00000092971 NpbQ8K4P1 119 aa12.1□□□□□ -0.47
Chd3-201ENSMUST00000092971 Rbbp6P97868 1790 aaKnown RBP12.1□□□□□ -0.47
Chd3-201ENSMUST00000092971 Edn1P22387 202 aa12.1□□□□□ -0.47
Chd3-201ENSMUST00000092971 BB014433Q8C5R5 389 aa12.1□□□□□ -0.47
Chd3-201ENSMUST00000092971 Brk1Q91VR8 75 aa12.1□□□□□ -0.47
Chd3-201ENSMUST00000092971 Gm28778A0A087WSK7 233 aa12.09□□□□□ -0.47
Chd3-201ENSMUST00000092971 Gm5294J3QP53 216 aa12.09□□□□□ -0.47
Chd3-201ENSMUST00000092971 Defb47Q30KN1 79 aa12.09□□□□□ -0.47
Chd3-201ENSMUST00000092971 Rbmy1bQ60990 380 aa12.09□□□□□ -0.47
Chd3-201ENSMUST00000092971 Ighv3-4A0A0A6YXF1 117 aa12.09□□□□□ -0.47
Chd3-201ENSMUST00000092971 Cdkn2aQ64364 169 aa12.09□□□□□ -0.47
Chd3-201ENSMUST00000092971 Ndufa12Q7TMF3 145 aaKnown RBP12.09□□□□□ -0.47
Chd3-201ENSMUST00000092971 Inafm2A0A1L1STD6 152 aa12.09□□□□□ -0.47
Retrieved 100 of 22,080 RNA–protein pairs in 111.5 ms