RNA–Protein interactions for RNA: ENSMUST00000077489.11

Scn1a-201, Transcript of Sodium channel protein type 1 subunit alpha, mousemouse

APPRIS P3 TSL 5 BASIC

Gene Scn1a, Length 8,116 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1a-201ENSMUST00000077489 Foxi1Q922I5 372 aa5.23□□□□□ -1.57
Scn1a-201ENSMUST00000077489 Spaca3Q9D9X8 221 aa5.23□□□□□ -1.57
Scn1a-201ENSMUST00000077489 Ighv5-8A0A075B676 92 aa5.22□□□□□ -1.57
Scn1a-201ENSMUST00000077489 Gm20481G3UXK4 153 aa5.22□□□□□ -1.57
Scn1a-201ENSMUST00000077489 P04945 108 aa5.22□□□□□ -1.57
Scn1a-201ENSMUST00000077489 Igkv12-89A0A0G2JGW8 112 aa5.22□□□□□ -1.57
Scn1a-201ENSMUST00000077489 A930003A15RikQ3U552 87 aa5.22□□□□□ -1.57
Scn1a-201ENSMUST00000077489 Tomm6Q9CQN3 74 aa5.22□□□□□ -1.57
Scn1a-201ENSMUST00000077489 Polr2aP08775 1970 aaKnown RBP5.22□□□□□ -1.57
Scn1a-201ENSMUST00000077489 Nup214Q80U93 2085 aa5.22□□□□□ -1.57
Scn1a-201ENSMUST00000077489 Nup205A0A0J9YUD5 2061 aaKnown RBP5.22□□□□□ -1.57
Scn1a-201ENSMUST00000077489 Gm12169F2Z474 250 aa5.22□□□□□ -1.57
Scn1a-201ENSMUST00000077489 P01811 117 aa5.22□□□□□ -1.57
Scn1a-201ENSMUST00000077489 Gata4Q08369 441 aa5.22□□□□□ -1.57
Scn1a-201ENSMUST00000077489 A530064D06RikQ8BNV8 229 aa5.22□□□□□ -1.57
Scn1a-201ENSMUST00000077489 Rasl10aQ8K5A4 203 aa5.22□□□□□ -1.57
Scn1a-201ENSMUST00000077489 Morn5Q9DAI9 170 aa5.22□□□□□ -1.57
Scn1a-201ENSMUST00000077489 Rpl35aO55142 110 aa5.22□□□□□ -1.57
Scn1a-201ENSMUST00000077489 P06330 118 aa5.22□□□□□ -1.57
Scn1a-201ENSMUST00000077489 Hoxd3P09027 433 aa5.22□□□□□ -1.57
Scn1a-201ENSMUST00000077489 Rnf183Q8QZS5 190 aa5.22□□□□□ -1.57
Scn1a-201ENSMUST00000077489 Shisa9Q9CZN4 424 aa5.22□□□□□ -1.57
Scn1a-201ENSMUST00000077489 Gm15080A2BI02 449 aa5.22□□□□□ -1.57
Scn1a-201ENSMUST00000077489 P03980 138 aa5.22□□□□□ -1.57
Scn1a-201ENSMUST00000077489 Ly6c1P0CW02 131 aa5.22□□□□□ -1.57
Scn1a-201ENSMUST00000077489 Znrf2Q71FD5 238 aa5.22□□□□□ -1.57
Scn1a-201ENSMUST00000077489 Plxna4Q80UG2 1893 aa5.22□□□□□ -1.57
Scn1a-201ENSMUST00000077489 ApomQ9Z1R3 190 aa5.21□□□□□ -1.57
Scn1a-201ENSMUST00000077489 Trav9-1A0A075B601 112 aa5.21□□□□□ -1.57
Scn1a-201ENSMUST00000077489 GfyJ3KML8 504 aa5.21□□□□□ -1.57
Scn1a-201ENSMUST00000077489 Gm16503Q8C6M9 103 aa5.21□□□□□ -1.57
Scn1a-201ENSMUST00000077489 Trav14d-1A0A075B6B1 121 aa5.21□□□□□ -1.58
Scn1a-201ENSMUST00000077489 Gm28269A0A087WSG3 125 aa5.21□□□□□ -1.58
Scn1a-201ENSMUST00000077489 Trav4-3A0A0B4J1K1 110 aa5.21□□□□□ -1.58
Scn1a-201ENSMUST00000077489 Mtatp8P03930 67 aa5.21□□□□□ -1.58
Scn1a-201ENSMUST00000077489 Ang2Q64438 145 aa5.21□□□□□ -1.58
Scn1a-201ENSMUST00000077489 Mrpl52Q9D0Y8 121 aa5.21□□□□□ -1.58
Scn1a-201ENSMUST00000077489 Lyrm9Q3UN90 78 aa5.21□□□□□ -1.58
Scn1a-201ENSMUST00000077489 Ubl5Q9EPV8 73 aa5.21□□□□□ -1.58
Scn1a-201ENSMUST00000077489 LctF8VPT3 1931 aa5.21□□□□□ -1.58
Scn1a-201ENSMUST00000077489 Rspo3Q2TJ95 277 aa5.21□□□□□ -1.58
Scn1a-201ENSMUST00000077489 Il22ra2Q80XF5 230 aa5.21□□□□□ -1.58
Scn1a-201ENSMUST00000077489 Scn5aQ9JJV9 2019 aa5.21□□□□□ -1.58
Scn1a-201ENSMUST00000077489 Zfp407G3UVV3 2246 aa5.21□□□□□ -1.58
Scn1a-201ENSMUST00000077489 Plxna2P70207 1894 aa5.21□□□□□ -1.58
Scn1a-201ENSMUST00000077489 Tmem200bD3Z0P8 284 aa5.21□□□□□ -1.58
Scn1a-201ENSMUST00000077489 Gm10384Q3UQ87 92 aa5.21□□□□□ -1.58
Scn1a-201ENSMUST00000077489 Ighv3-8A0A075B5T0 131 aa5.2□□□□□ -1.58
Scn1a-201ENSMUST00000077489 Ighv1-4A0A075B5T4 117 aa5.2□□□□□ -1.58
Scn1a-201ENSMUST00000077489 Ighv1-64A0A075B5X3 117 aa5.2□□□□□ -1.58
Scn1a-201ENSMUST00000077489 PolP10400 120 aa5.2□□□□□ -1.58
Scn1a-201ENSMUST00000077489 Synj2bpQ9D6K5 145 aa5.2□□□□□ -1.58
Scn1a-201ENSMUST00000077489 Fam216aQ9DB54 251 aa5.2□□□□□ -1.58
Scn1a-201ENSMUST00000077489 Igkv3-2A0A075B5P0 119 aa5.2□□□□□ -1.58
Scn1a-201ENSMUST00000077489 Wisp3D3Z5L9 354 aa5.2□□□□□ -1.58
Scn1a-201ENSMUST00000077489 Insl3O09107 122 aa5.2□□□□□ -1.58
Scn1a-201ENSMUST00000077489 Sdhaf1Q3U276 118 aa5.2□□□□□ -1.58
Scn1a-201ENSMUST00000077489 Rs1Q9Z1L4 224 aa5.2□□□□□ -1.58
Scn1a-201ENSMUST00000077489 Pi4kaE9Q3L2 2105 aa5.2□□□□□ -1.58
Scn1a-201ENSMUST00000077489 Igkv4-62A0A0G2JDW9 117 aa5.2□□□□□ -1.58
Scn1a-201ENSMUST00000077489 KprpB2RUR4 657 aa5.2□□□□□ -1.58
Scn1a-201ENSMUST00000077489 GhrhP16043 103 aa5.2□□□□□ -1.58
Scn1a-201ENSMUST00000077489 Dad1P61804 113 aa5.2□□□□□ -1.58
Scn1a-201ENSMUST00000077489 P01738 130 aa5.2□□□□□ -1.58
Scn1a-201ENSMUST00000077489 CrygbP04344 175 aa5.2□□□□□ -1.58
Scn1a-201ENSMUST00000077489 Ca1P13634 261 aa5.2□□□□□ -1.58
Scn1a-201ENSMUST00000077489 C730034F03RikQ8BGL5 111 aa5.2□□□□□ -1.58
Scn1a-201ENSMUST00000077489 Q8C708 225 aa5.2□□□□□ -1.58
Scn1a-201ENSMUST00000077489 Crlf1Q9JM58 425 aa5.2□□□□□ -1.58
Scn1a-201ENSMUST00000077489 Trav4d-3A0A075B625 110 aa5.19□□□□□ -1.58
Scn1a-201ENSMUST00000077489 Shisal2aA2A9G7 189 aa5.19□□□□□ -1.58
Scn1a-201ENSMUST00000077489 Gm4744D3Z3S5 154 aa5.19□□□□□ -1.58
Scn1a-201ENSMUST00000077489 Gm20604F8WIA3 75 aa5.19□□□□□ -1.58
Scn1a-201ENSMUST00000077489 Ntf4Q80VU4 209 aa5.19□□□□□ -1.58
Scn1a-201ENSMUST00000077489 ArtnQ9Z0L2 224 aa5.19□□□□□ -1.58
Scn1a-201ENSMUST00000077489 Gm7102J3QQ10 178 aa5.19□□□□□ -1.58
Scn1a-201ENSMUST00000077489 Prdm6Q3UZD5 596 aa5.19□□□□□ -1.58
Scn1a-201ENSMUST00000077489 Fhl4Q8CDC8 279 aa5.19□□□□□ -1.58
Scn1a-201ENSMUST00000077489 8030423J24RikQ9CX45 142 aa5.19□□□□□ -1.58
Scn1a-201ENSMUST00000077489 Wdr81Q5ND34 1934 aa5.19□□□□□ -1.58
Scn1a-201ENSMUST00000077489 P01788 123 aa5.19□□□□□ -1.58
Scn1a-201ENSMUST00000077489 Trav7-2Q5R1I3 112 aa5.19□□□□□ -1.58
Scn1a-201ENSMUST00000077489 Cysrt1Q9D1E4 142 aa5.19□□□□□ -1.58
Scn1a-201ENSMUST00000077489 Dazap2Q9DCP9 168 aa5.19□□□□□ -1.58
Scn1a-201ENSMUST00000077489 Defa27F2Z403 93 aa5.19□□□□□ -1.58
Scn1a-201ENSMUST00000077489 Gm815Q3UWS2 115 aa5.19□□□□□ -1.58
Scn1a-201ENSMUST00000077489 Pom121l2Q5SW25 972 aa5.19□□□□□ -1.58
Scn1a-201ENSMUST00000077489 Slc25a48Q8BW66 306 aa5.19□□□□□ -1.58
Scn1a-201ENSMUST00000077489 Defb3Q9WTL0 63 aa5.19□□□□□ -1.58
Scn1a-201ENSMUST00000077489 Trav12-3A0A075B648 115 aa5.18□□□□□ -1.58
Scn1a-201ENSMUST00000077489 NpsP0C0P8 89 aa5.18□□□□□ -1.58
Scn1a-201ENSMUST00000077489 Ighv1-58A0A075B5W9 117 aa5.18□□□□□ -1.58
Scn1a-201ENSMUST00000077489 Gm15217A2CG07 155 aa5.18□□□□□ -1.58
Scn1a-201ENSMUST00000077489 P01792 123 aa5.18□□□□□ -1.58
Scn1a-201ENSMUST00000077489 Reg3dQ9QUS9 175 aa5.18□□□□□ -1.58
Scn1a-201ENSMUST00000077489 Ighv1-74A0A0G2JGK2 117 aa5.18□□□□□ -1.58
Scn1a-201ENSMUST00000077489 Ube2e2Q91W82 201 aa5.18□□□□□ -1.58
Scn1a-201ENSMUST00000077489 Tmem210Q9D2F0 147 aa5.18□□□□□ -1.58
Scn1a-201ENSMUST00000077489 Gm5129F6YHA9 99 aa5.18□□□□□ -1.58
Scn1a-201ENSMUST00000077489 Slc25a29Q8BL03 306 aa5.18□□□□□ -1.58
Retrieved 100 of 22,080 RNA–protein pairs in 100 ms