RNA–Protein interactions for RNA: ENSMUST00000055758.15

Ubr3-201, Transcript of E3 ubiquitin-protein ligase UBR3, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ubr3, Length 8,072 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr3-201ENSMUST00000055758 Znf22Q9ERU3 237 aa12.86□□□□□ -0.35
Ubr3-201ENSMUST00000055758 Ighv1-23A0A0A6YVW3 117 aa12.86□□□□□ -0.35
Ubr3-201ENSMUST00000055758 Gm10645Q3UPY1 145 aa12.86□□□□□ -0.35
Ubr3-201ENSMUST00000055758 PcolceQ61398 468 aa12.86□□□□□ -0.35
Ubr3-201ENSMUST00000055758 Ucn2Q99ML8 113 aa12.86□□□□□ -0.35
Ubr3-201ENSMUST00000055758 4930412O13RikQ9D5M9 106 aa12.86□□□□□ -0.35
Ubr3-201ENSMUST00000055758 LtbP41155 306 aa12.86□□□□□ -0.35
Ubr3-201ENSMUST00000055758 H2al1aQ5M8Q2 105 aa12.86□□□□□ -0.35
Ubr3-201ENSMUST00000055758 H2al1eQ810S6 105 aa12.86□□□□□ -0.35
Ubr3-201ENSMUST00000055758 Lrp4Q8VI56 1905 aa12.85□□□□□ -0.35
Ubr3-201ENSMUST00000055758 AgerQ62151 402 aa12.85□□□□□ -0.35
Ubr3-201ENSMUST00000055758 PpbpQ9EQI5 113 aa12.85□□□□□ -0.35
Ubr3-201ENSMUST00000055758 Igkv14-111A0A140T8P9 117 aa12.85□□□□□ -0.35
Ubr3-201ENSMUST00000055758 Igkv3-9A0A140T8P4 119 aa12.85□□□□□ -0.35
Ubr3-201ENSMUST00000055758 F930015N05RikQ8C3A3 210 aa12.85□□□□□ -0.35
Ubr3-201ENSMUST00000055758 Gm4792Q569Q2 183 aa12.84□□□□□ -0.35
Ubr3-201ENSMUST00000055758 Zg16Q8K0C5 167 aa12.84□□□□□ -0.35
Ubr3-201ENSMUST00000055758 Taf15Q8BQ46 557 aaKnown RBP12.84□□□□□ -0.35
Ubr3-201ENSMUST00000055758 1110002E22RikE0CYV9 1786 aa12.84□□□□□ -0.35
Ubr3-201ENSMUST00000055758 Shank3Q4ACU6 1730 aa12.84□□□□□ -0.35
Ubr3-201ENSMUST00000055758 Fndc7A2AED3 737 aa12.84□□□□□ -0.35
Ubr3-201ENSMUST00000055758 Neurog3P70661 214 aa12.84□□□□□ -0.35
Ubr3-201ENSMUST00000055758 Trbv12-2A0A0B4J1H1 124 aa12.84□□□□□ -0.35
Ubr3-201ENSMUST00000055758 P01787 123 aa12.84□□□□□ -0.35
Ubr3-201ENSMUST00000055758 Defb33Q30KN3 62 aa12.84□□□□□ -0.35
Ubr3-201ENSMUST00000055758 Nbl1Q61477 178 aa12.84□□□□□ -0.35
Ubr3-201ENSMUST00000055758 Q8BTC1 67 aa12.84□□□□□ -0.35
Ubr3-201ENSMUST00000055758 Msrb3Q8BU85 253 aa12.84□□□□□ -0.35
Ubr3-201ENSMUST00000055758 PifoQ9D9W1 207 aa12.84□□□□□ -0.35
Ubr3-201ENSMUST00000055758 Sap30O88574 220 aa12.83□□□□□ -0.35
Ubr3-201ENSMUST00000055758 Hs3st6Q5GFD5 342 aa12.83□□□□□ -0.36
Ubr3-201ENSMUST00000055758 Q9D8L0 127 aa12.83□□□□□ -0.36
Ubr3-201ENSMUST00000055758 Foxi3E0CZH3 425 aa12.83□□□□□ -0.36
Ubr3-201ENSMUST00000055758 Klhdc3Q8VEM9 382 aa12.83□□□□□ -0.36
Ubr3-201ENSMUST00000055758 Cdkn1aP39689 159 aa12.83□□□□□ -0.36
Ubr3-201ENSMUST00000055758 Gm5105Q8C6Y9 112 aa12.83□□□□□ -0.36
Ubr3-201ENSMUST00000055758 Ifi27l2aQ8R412 90 aa12.83□□□□□ -0.36
Ubr3-201ENSMUST00000055758 1700031F05RikB1AX30 191 aa12.83□□□□□ -0.36
Ubr3-201ENSMUST00000055758 Ly75Q60767 1723 aa12.83□□□□□ -0.36
Ubr3-201ENSMUST00000055758 Ndufs5Q99LY9 106 aa12.83□□□□□ -0.36
Ubr3-201ENSMUST00000055758 Pax9P47242 342 aa12.82□□□□□ -0.36
Ubr3-201ENSMUST00000055758 CrygbP04344 175 aa12.82□□□□□ -0.36
Ubr3-201ENSMUST00000055758 Gm10803Q3TZS6 135 aa12.82□□□□□ -0.36
Ubr3-201ENSMUST00000055758 Vmo1Q5SXG7 201 aa12.82□□□□□ -0.36
Ubr3-201ENSMUST00000055758 Gm17334Q8C6U3 126 aa12.82□□□□□ -0.36
Ubr3-201ENSMUST00000055758 Klk4Q9Z0M1 255 aa12.82□□□□□ -0.36
Ubr3-201ENSMUST00000055758 Dad1P61804 113 aa12.82□□□□□ -0.36
Ubr3-201ENSMUST00000055758 Ube2d2bQ6ZWY6 147 aa12.82□□□□□ -0.36
Ubr3-201ENSMUST00000055758 P01788 123 aa12.82□□□□□ -0.36
Ubr3-201ENSMUST00000055758 NracQ8BNX7 165 aa12.82□□□□□ -0.36
Ubr3-201ENSMUST00000055758 Pla2g2aP31482 146 aa12.82□□□□□ -0.36
Ubr3-201ENSMUST00000055758 Rspo3Q2TJ95 277 aa12.82□□□□□ -0.36
Ubr3-201ENSMUST00000055758 Tnfrsf23Q9ER63 176 aa12.82□□□□□ -0.36
Ubr3-201ENSMUST00000055758 Ighv1-20A0A0A6YX66 117 aa12.81□□□□□ -0.36
Ubr3-201ENSMUST00000055758 GlrxQ9QUH0 107 aa12.81□□□□□ -0.36
Ubr3-201ENSMUST00000055758 PmvkQ9D1G2 192 aa12.81□□□□□ -0.36
Ubr3-201ENSMUST00000055758 AcacbE9Q4Z2 2448 aa12.81□□□□□ -0.36
Ubr3-201ENSMUST00000055758 Igll1P20764 209 aa12.81□□□□□ -0.36
Ubr3-201ENSMUST00000055758 Ang6Q5GAN0 147 aa12.81□□□□□ -0.36
Ubr3-201ENSMUST00000055758 P01726 129 aa12.81□□□□□ -0.36
Ubr3-201ENSMUST00000055758 VsirQ9D659 308 aa12.81□□□□□ -0.36
Ubr3-201ENSMUST00000055758 Pou2af1Q64693 256 aa12.81□□□□□ -0.36
Ubr3-201ENSMUST00000055758 Gm21976J3QNN2 249 aa12.81□□□□□ -0.36
Ubr3-201ENSMUST00000055758 Gm16686Q3UMN9 131 aa12.81□□□□□ -0.36
Ubr3-201ENSMUST00000055758 Stpg1Q9D2F5 341 aa12.81□□□□□ -0.36
Ubr3-201ENSMUST00000055758 Ube2e2Q91W82 201 aa12.8□□□□□ -0.36
Ubr3-201ENSMUST00000055758 Zfp420Q7TMN8 578 aa12.8□□□□□ -0.36
Ubr3-201ENSMUST00000055758 Q80X32 188 aaKnown RBP12.8□□□□□ -0.36
Ubr3-201ENSMUST00000055758 Card19Q9D1I2 183 aa12.8□□□□□ -0.36
Ubr3-201ENSMUST00000055758 Ighv1-37A0A0A6YW32 117 aa12.8□□□□□ -0.36
Ubr3-201ENSMUST00000055758 CtsbP10605 339 aa12.8□□□□□ -0.36
Ubr3-201ENSMUST00000055758 C1qtnf5Q8K479 243 aa12.8□□□□□ -0.36
Ubr3-201ENSMUST00000055758 Ss18l1Q8BW22 402 aa12.8□□□□□ -0.36
Ubr3-201ENSMUST00000055758 Srsf7Q8BL97 267 aaKnown RBP12.8□□□□□ -0.36
Ubr3-201ENSMUST00000055758 Ovol1Q9WTJ2 267 aa12.8□□□□□ -0.36
Ubr3-201ENSMUST00000055758 P18533 117 aa12.79□□□□□ -0.36
Ubr3-201ENSMUST00000055758 Tm4sf19E9Q9H8 206 aa12.79□□□□□ -0.36
Ubr3-201ENSMUST00000055758 Gm11110Q3U4K9 109 aa12.79□□□□□ -0.36
Ubr3-201ENSMUST00000055758 Spred3Q6P6N5 408 aa12.79□□□□□ -0.36
Ubr3-201ENSMUST00000055758 Mapk1ip1Q9D7G9 263 aa12.79□□□□□ -0.36
Ubr3-201ENSMUST00000055758 Rnf166Q3U9F6 237 aa12.79□□□□□ -0.36
Ubr3-201ENSMUST00000055758 SostQ99P68 211 aa12.79□□□□□ -0.36
Ubr3-201ENSMUST00000055758 Ccl12Q62401 104 aa12.79□□□□□ -0.36
Ubr3-201ENSMUST00000055758 P01741 114 aa12.79□□□□□ -0.36
Ubr3-201ENSMUST00000055758 Efna4O08542 206 aa12.78□□□□□ -0.36
Ubr3-201ENSMUST00000055758 P01739 132 aa12.78□□□□□ -0.36
Ubr3-201ENSMUST00000055758 ElaneQ3UP87 265 aa12.78□□□□□ -0.36
Ubr3-201ENSMUST00000055758 Trdv4Q5R1A3 115 aa12.78□□□□□ -0.36
Ubr3-201ENSMUST00000055758 Atp23Q9CWQ3 201 aa12.78□□□□□ -0.36
Ubr3-201ENSMUST00000055758 Edn1P22387 202 aa12.78□□□□□ -0.36
Ubr3-201ENSMUST00000055758 Rasl10aQ8K5A4 203 aa12.78□□□□□ -0.36
Ubr3-201ENSMUST00000055758 Foxi1Q922I5 372 aa12.78□□□□□ -0.36
Ubr3-201ENSMUST00000055758 Cbln3Q9JHG0 197 aa12.78□□□□□ -0.36
Ubr3-201ENSMUST00000055758 Znf260Q62513 407 aa12.77□□□□□ -0.36
Ubr3-201ENSMUST00000055758 Slc25a47Q6IS41 310 aa12.77□□□□□ -0.36
Ubr3-201ENSMUST00000055758 Il22ra2Q80XF5 230 aa12.77□□□□□ -0.36
Ubr3-201ENSMUST00000055758 Fgf4P11403 202 aa12.77□□□□□ -0.36
Ubr3-201ENSMUST00000055758 Timm21Q8CCM6 249 aa12.77□□□□□ -0.37
Ubr3-201ENSMUST00000055758 Rnf125Q9D9R0 233 aa12.77□□□□□ -0.37
Ubr3-201ENSMUST00000055758 Tcl1b4P56844 120 aa12.77□□□□□ -0.37
Retrieved 100 of 22,080 RNA–protein pairs in 42.4 ms