RNA–Protein interactions for RNA: ENSMUST00000035935.8

Ccdc40-201, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc40, Length 4,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-201ENSMUST00000035935 Znf787Q8BIF9 381 aa8.15□□□□□ -1.11
Ccdc40-201ENSMUST00000035935 F930015N05RikQ8C3A3 210 aa8.15□□□□□ -1.11
Ccdc40-201ENSMUST00000035935 Sdk2Q6V4S5 2176 aa8.15□□□□□ -1.11
Ccdc40-201ENSMUST00000035935 Col6a6Q8C6K9 2265 aa8.15□□□□□ -1.11
Ccdc40-201ENSMUST00000035935 Trav14d-1A0A075B6B1 121 aa8.14□□□□□ -1.11
Ccdc40-201ENSMUST00000035935 Gm7075D3Z497 112 aa8.14□□□□□ -1.11
Ccdc40-201ENSMUST00000035935 Srsf2Q62093 221 aaKnown RBP8.14□□□□□ -1.11
Ccdc40-201ENSMUST00000035935 Olfr1367Q8VFG2 316 aa8.14□□□□□ -1.11
Ccdc40-201ENSMUST00000035935 PerpQ9JK95 193 aa8.14□□□□□ -1.11
Ccdc40-201ENSMUST00000035935 Dpm2Q9Z324 84 aa8.14□□□□□ -1.11
Ccdc40-201ENSMUST00000035935 Pradc1Q9D9N8 188 aa8.14□□□□□ -1.11
Ccdc40-201ENSMUST00000035935 Ighv1-74A0A0G2JGK2 117 aa8.14□□□□□ -1.11
Ccdc40-201ENSMUST00000035935 Itgb1bp1O35671 200 aa8.14□□□□□ -1.11
Ccdc40-201ENSMUST00000035935 CtsbP10605 339 aa8.14□□□□□ -1.11
Ccdc40-201ENSMUST00000035935 Cysrt1Q9D1E4 142 aa8.14□□□□□ -1.11
Ccdc40-201ENSMUST00000035935 Tmem52Q9D702 196 aa8.14□□□□□ -1.11
Ccdc40-201ENSMUST00000035935 Mlst8Q9DCJ1 326 aa8.14□□□□□ -1.11
Ccdc40-201ENSMUST00000035935 Gm28038F7BCN9 126 aa8.13□□□□□ -1.11
Ccdc40-201ENSMUST00000035935 Ndufa4Q62425 82 aaKnown RBP8.13□□□□□ -1.11
Ccdc40-201ENSMUST00000035935 Cep250Q60952 2414 aa8.13□□□□□ -1.11
Ccdc40-201ENSMUST00000035935 Trav12-3A0A075B648 115 aa8.13□□□□□ -1.11
Ccdc40-201ENSMUST00000035935 Ighv5-9-1A0A0A6YVS4 126 aa8.13□□□□□ -1.11
Ccdc40-201ENSMUST00000035935 Il22ra2Q80XF5 230 aa8.13□□□□□ -1.11
Ccdc40-201ENSMUST00000035935 Nhlrc1Q8BR37 401 aa8.13□□□□□ -1.11
Ccdc40-201ENSMUST00000035935 Gpr82Q8BZR0 328 aa8.13□□□□□ -1.11
Ccdc40-201ENSMUST00000035935 Ighv1-4A0A075B5T4 117 aa8.13□□□□□ -1.11
Ccdc40-201ENSMUST00000035935 Gm45785A0A1B0GT05 94 aa8.13□□□□□ -1.11
Ccdc40-201ENSMUST00000035935 Prop1P97458 223 aa8.13□□□□□ -1.11
Ccdc40-201ENSMUST00000035935 March3Q8BRX9 218 aa8.13□□□□□ -1.11
Ccdc40-201ENSMUST00000035935 Tmem210Q9D2F0 147 aa8.13□□□□□ -1.11
Ccdc40-201ENSMUST00000035935 Gm19410A0A140LJC7 2098 aa8.13□□□□□ -1.11
Ccdc40-201ENSMUST00000035935 Tln2Q71LX4 2375 aa8.13□□□□□ -1.11
Ccdc40-201ENSMUST00000035935 Ighv1-58A0A075B5W9 117 aa8.13□□□□□ -1.11
Ccdc40-201ENSMUST00000035935 Trav14-2A0A075B694 121 aa8.13□□□□□ -1.11
Ccdc40-201ENSMUST00000035935 Gm2564F6Z9S8 108 aa8.13□□□□□ -1.11
Ccdc40-201ENSMUST00000035935 Ccl19O70460 108 aa8.13□□□□□ -1.11
Ccdc40-201ENSMUST00000035935 CtsgP28293 261 aa8.13□□□□□ -1.11
Ccdc40-201ENSMUST00000035935 Lyg1Q9D7Q0 197 aa8.13□□□□□ -1.11
Ccdc40-201ENSMUST00000035935 Trav12d-3A0A075B6A4 115 aa8.12□□□□□ -1.11
Ccdc40-201ENSMUST00000035935 Gm29289A0A087WPY7 166 aa8.12□□□□□ -1.11
Ccdc40-201ENSMUST00000035935 Gm4064A0A087WR82 380 aa8.12□□□□□ -1.11
Ccdc40-201ENSMUST00000035935 Gm10352B2RWR6 380 aa8.12□□□□□ -1.11
Ccdc40-201ENSMUST00000035935 Gm21693J3QK27 380 aa8.12□□□□□ -1.11
Ccdc40-201ENSMUST00000035935 Rbmy1a1O35698 380 aa8.12□□□□□ -1.11
Ccdc40-201ENSMUST00000035935 Prok1Q14A28 105 aa8.12□□□□□ -1.11
Ccdc40-201ENSMUST00000035935 Tmem14cQ9CQN6 114 aa8.12□□□□□ -1.11
Ccdc40-201ENSMUST00000035935 HilpdaQ9JLS0 64 aa8.12□□□□□ -1.11
Ccdc40-201ENSMUST00000035935 Sec16aA2AIX1 2377 aa8.12□□□□□ -1.11
Ccdc40-201ENSMUST00000035935 Gm15127B1AVZ5 449 aa8.12□□□□□ -1.11
Ccdc40-201ENSMUST00000035935 Gm15091B1AZM2 449 aa8.12□□□□□ -1.11
Ccdc40-201ENSMUST00000035935 P04944 107 aa8.12□□□□□ -1.11
Ccdc40-201ENSMUST00000035935 Gm11733Q8BQP1 125 aa8.12□□□□□ -1.11
Ccdc40-201ENSMUST00000035935 PmvkQ9D1G2 192 aa8.12□□□□□ -1.11
Ccdc40-201ENSMUST00000035935 Nat8b-psE0CYC6 232 aa8.12□□□□□ -1.11
Ccdc40-201ENSMUST00000035935 P01741 114 aa8.12□□□□□ -1.11
Ccdc40-201ENSMUST00000035935 Tdgf1P51865 171 aa8.12□□□□□ -1.11
Ccdc40-201ENSMUST00000035935 Sp5Q9JHX2 398 aa8.12□□□□□ -1.11
Ccdc40-201ENSMUST00000035935 Sap30O88574 220 aa8.11□□□□□ -1.11
Ccdc40-201ENSMUST00000035935 Gm904Q3V2L5 102 aa8.11□□□□□ -1.11
Ccdc40-201ENSMUST00000035935 Atp6v0bQ91V37 205 aa8.11□□□□□ -1.11
Ccdc40-201ENSMUST00000035935 Gm15128A2ADW8 449 aa8.11□□□□□ -1.11
Ccdc40-201ENSMUST00000035935 Gm15080A2BI02 449 aa8.11□□□□□ -1.11
Ccdc40-201ENSMUST00000035935 Gm15093A2BI72 449 aa8.11□□□□□ -1.11
Ccdc40-201ENSMUST00000035935 Luzp4B1AV09 449 aa8.11□□□□□ -1.11
Ccdc40-201ENSMUST00000035935 Gm15107B1B0X0 449 aa8.11□□□□□ -1.11
Ccdc40-201ENSMUST00000035935 Gm15097E9QA14 449 aa8.11□□□□□ -1.11
Ccdc40-201ENSMUST00000035935 H2-DMb1P35737 261 aa8.11□□□□□ -1.11
Ccdc40-201ENSMUST00000035935 Gm15085Q62012 449 aa8.11□□□□□ -1.11
Ccdc40-201ENSMUST00000035935 Phpt1Q9DAK9 124 aa8.11□□□□□ -1.11
Ccdc40-201ENSMUST00000035935 Gm7849D3YX03 116 aa8.11□□□□□ -1.11
Ccdc40-201ENSMUST00000035935 Gm10521E9PZK0 135 aa8.11□□□□□ -1.11
Ccdc40-201ENSMUST00000035935 Gata4Q08369 441 aa8.11□□□□□ -1.11
Ccdc40-201ENSMUST00000035935 Sptan1P16546 2472 aaKnown RBP8.11□□□□□ -1.11
Ccdc40-201ENSMUST00000035935 Tomm6Q9CQN3 74 aa8.11□□□□□ -1.11
Ccdc40-201ENSMUST00000035935 Ighv3-1A0A075B5S6 116 aa8.1□□□□□ -1.11
Ccdc40-201ENSMUST00000035935 Ighv1-64A0A075B5X3 117 aa8.1□□□□□ -1.11
Ccdc40-201ENSMUST00000035935 Akap6E9Q9K8 2307 aa8.1□□□□□ -1.11
Ccdc40-201ENSMUST00000035935 PoleQ9WVF7 2283 aa8.1□□□□□ -1.11
Ccdc40-201ENSMUST00000035935 Cited2O35740 269 aa8.1□□□□□ -1.11
Ccdc40-201ENSMUST00000035935 9130230L23RikQ8CC80 163 aa8.1□□□□□ -1.11
Ccdc40-201ENSMUST00000035935 Chac1Q8R3J5 223 aa8.1□□□□□ -1.11
Ccdc40-201ENSMUST00000035935 Samd10Q7TST3 202 aa8.1□□□□□ -1.11
Ccdc40-201ENSMUST00000035935 Avpi1Q9D7H4 142 aa8.1□□□□□ -1.11
Ccdc40-201ENSMUST00000035935 AgrnA2ASQ1 1950 aa8.1□□□□□ -1.11
Ccdc40-201ENSMUST00000035935 Med12lQ8BQM9 2157 aa8.09□□□□□ -1.11
Ccdc40-201ENSMUST00000035935 Trav8-1A0A075B641 109 aa8.09□□□□□ -1.11
Ccdc40-201ENSMUST00000035935 Ighv1-77A0A0G2JGS9 117 aa8.09□□□□□ -1.11
Ccdc40-201ENSMUST00000035935 Cd69P37217 199 aa8.09□□□□□ -1.11
Ccdc40-201ENSMUST00000035935 CrygcQ61597 174 aa8.09□□□□□ -1.11
Ccdc40-201ENSMUST00000035935 Wnk2Q3UH66 2149 aa8.09□□□□□ -1.11
Ccdc40-201ENSMUST00000035935 Crybg1A0A0G2JG52 2065 aa8.09□□□□□ -1.11
Ccdc40-201ENSMUST00000035935 Pcsk5Q04592 1877 aa8.09□□□□□ -1.11
Ccdc40-201ENSMUST00000035935 4930447F04RikA2AFR2 126 aa8.09□□□□□ -1.11
Ccdc40-201ENSMUST00000035935 Gm20499D3Z4G5 72 aa8.09□□□□□ -1.11
Ccdc40-201ENSMUST00000035935 Gm5941Q497P9 117 aa8.09□□□□□ -1.11
Ccdc40-201ENSMUST00000035935 Esp24A8R0V6 68 aa8.09□□□□□ -1.11
Ccdc40-201ENSMUST00000035935 Gm6899Q3USS0 134 aa8.09□□□□□ -1.11
Ccdc40-201ENSMUST00000035935 Gm17324Q8C6J8 137 aa8.09□□□□□ -1.11
Ccdc40-201ENSMUST00000035935 P01793 123 aa8.09□□□□□ -1.12
Ccdc40-201ENSMUST00000035935 Trav3-1Q5R1I8 114 aa8.09□□□□□ -1.12
Retrieved 100 of 22,080 RNA–protein pairs in 120.6 ms