RNA–Protein interactions for RNA: ENSMUST00000028280.13

Col5a1-201, Transcript of Collagen alpha-1(V) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col5a1, Length 8,406 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1-201ENSMUST00000028280 Hs3st6Q5GFD5 342 aa11.4□□□□□ -0.59
Col5a1-201ENSMUST00000028280 Q8BTC1 67 aa11.4□□□□□ -0.59
Col5a1-201ENSMUST00000028280 Gm5105Q8C6Y9 112 aa11.4□□□□□ -0.59
Col5a1-201ENSMUST00000028280 Defb3Q9WTL0 63 aa11.4□□□□□ -0.59
Col5a1-201ENSMUST00000028280 Nav3Q80TN7 2359 aa11.4□□□□□ -0.59
Col5a1-201ENSMUST00000028280 Gm11110Q3U4K9 109 aa11.39□□□□□ -0.59
Col5a1-201ENSMUST00000028280 Brwd1Q921C3 2304 aa11.39□□□□□ -0.59
Col5a1-201ENSMUST00000028280 Gm7075D3Z497 112 aa11.39□□□□□ -0.59
Col5a1-201ENSMUST00000028280 Gm19345G3UYD9 124 aa11.39□□□□□ -0.59
Col5a1-201ENSMUST00000028280 Ccl6P27784 116 aa11.39□□□□□ -0.59
Col5a1-201ENSMUST00000028280 Mapk1ip1Q9D7G9 263 aa11.39□□□□□ -0.59
Col5a1-201ENSMUST00000028280 Neurog3P70661 214 aa11.39□□□□□ -0.59
Col5a1-201ENSMUST00000028280 Tex26Q0VB26 296 aa11.39□□□□□ -0.59
Col5a1-201ENSMUST00000028280 Gm10306Q9CUK2 115 aa11.39□□□□□ -0.59
Col5a1-201ENSMUST00000028280 Fbln5Q9WVH9 448 aa11.39□□□□□ -0.59
Col5a1-201ENSMUST00000028280 Trav6-4A0A075B6B4 115 aa11.39□□□□□ -0.59
Col5a1-201ENSMUST00000028280 Ccl12Q62401 104 aa11.39□□□□□ -0.59
Col5a1-201ENSMUST00000028280 P01723 117 aa11.39□□□□□ -0.59
Col5a1-201ENSMUST00000028280 Igkv3-9A0A140T8P4 119 aa11.38□□□□□ -0.59
Col5a1-201ENSMUST00000028280 Iglc2P01844 104 aa11.38□□□□□ -0.59
Col5a1-201ENSMUST00000028280 Cdkn1aP39689 159 aa11.38□□□□□ -0.59
Col5a1-201ENSMUST00000028280 Zfp420Q7TMN8 578 aa11.38□□□□□ -0.59
Col5a1-201ENSMUST00000028280 4930442H23RikQ9D5G7 103 aa11.38□□□□□ -0.59
Col5a1-201ENSMUST00000028280 Znf22Q9ERU3 237 aa11.38□□□□□ -0.59
Col5a1-201ENSMUST00000028280 Trav14n-2A0A0G2JDF5 121 aa11.38□□□□□ -0.59
Col5a1-201ENSMUST00000028280 NmbQ9CR53 121 aa11.38□□□□□ -0.59
Col5a1-201ENSMUST00000028280 Smr2O09133 150 aa11.37□□□□□ -0.59
Col5a1-201ENSMUST00000028280 Dennd4cA6H8H2 1906 aa11.37□□□□□ -0.59
Col5a1-201ENSMUST00000028280 Tal2Q62282 108 aa11.37□□□□□ -0.59
Col5a1-201ENSMUST00000028280 Ms4a8Q99N10 290 aa11.37□□□□□ -0.59
Col5a1-201ENSMUST00000028280 Trbv12-2A0A0B4J1H1 124 aa11.37□□□□□ -0.59
Col5a1-201ENSMUST00000028280 Pde6hP61249 83 aa11.37□□□□□ -0.59
Col5a1-201ENSMUST00000028280 Prr3Q811B5 190 aaKnown RBP11.37□□□□□ -0.59
Col5a1-201ENSMUST00000028280 A530064D06RikQ8BNV8 229 aa11.37□□□□□ -0.59
Col5a1-201ENSMUST00000028280 Spink12Q9D256 87 aa11.37□□□□□ -0.59
Col5a1-201ENSMUST00000028280 Gm5294J3QP53 216 aa11.37□□□□□ -0.59
Col5a1-201ENSMUST00000028280 Tcf20Q9EPQ8 1987 aa11.36□□□□□ -0.59
Col5a1-201ENSMUST00000028280 Supt4h1aP63271 117 aa11.36□□□□□ -0.59
Col5a1-201ENSMUST00000028280 Sslp1Q3UN54 99 aa11.36□□□□□ -0.59
Col5a1-201ENSMUST00000028280 ElaneQ3UP87 265 aa11.36□□□□□ -0.59
Col5a1-201ENSMUST00000028280 SonQ9QX47 2444 aaKnown RBP11.36□□□□□ -0.59
Col5a1-201ENSMUST00000028280 Fndc7A2AED3 737 aa11.36□□□□□ -0.59
Col5a1-201ENSMUST00000028280 P01726 129 aa11.36□□□□□ -0.59
Col5a1-201ENSMUST00000028280 9130213A22RikQ3V3T2 120 aa11.36□□□□□ -0.59
Col5a1-201ENSMUST00000028280 Tcf15Q60756 195 aa11.36□□□□□ -0.59
Col5a1-201ENSMUST00000028280 Ube2d2bQ6ZWY6 147 aa11.36□□□□□ -0.59
Col5a1-201ENSMUST00000028280 Ly6g5bQ8K1T4 194 aa11.36□□□□□ -0.59
Col5a1-201ENSMUST00000028280 Cd59aO55186 123 aa11.35□□□□□ -0.59
Col5a1-201ENSMUST00000028280 Wt1P22561 449 aa11.35□□□□□ -0.59
Col5a1-201ENSMUST00000028280 Gm16503Q8C6M9 103 aa11.35□□□□□ -0.59
Col5a1-201ENSMUST00000028280 Pgpep1lQ9CWB5 130 aa11.35□□□□□ -0.59
Col5a1-201ENSMUST00000028280 Tcl1b4P56844 120 aa11.35□□□□□ -0.59
Col5a1-201ENSMUST00000028280 Gm15294V9GXA7 121 aa11.35□□□□□ -0.59
Col5a1-201ENSMUST00000028280 C1qtnf5Q8K479 243 aa11.35□□□□□ -0.59
Col5a1-201ENSMUST00000028280 Q9CQM1 111 aa11.35□□□□□ -0.59
Col5a1-201ENSMUST00000028280 Trav7-1A0A0G2JEV5 112 aa11.35□□□□□ -0.59
Col5a1-201ENSMUST00000028280 Ighv1-62-3P01754 117 aa11.35□□□□□ -0.59
Col5a1-201ENSMUST00000028280 Rspo3Q2TJ95 277 aa11.35□□□□□ -0.59
Col5a1-201ENSMUST00000028280 Supt4h1bQ9Z199 117 aa11.35□□□□□ -0.59
Col5a1-201ENSMUST00000028280 Ube2e2Q91W82 201 aa11.34□□□□□ -0.59
Col5a1-201ENSMUST00000028280 1110002E22RikE0CYV9 1786 aa11.34□□□□□ -0.59
Col5a1-201ENSMUST00000028280 Dopey1Q8BL99 2399 aa11.34□□□□□ -0.59
Col5a1-201ENSMUST00000028280 P01812 117 aa11.34□□□□□ -0.59
Col5a1-201ENSMUST00000028280 Gm9513B3GLJ6 99 aa11.34□□□□□ -0.59
Col5a1-201ENSMUST00000028280 Gm4744D3Z3S5 154 aa11.34□□□□□ -0.59
Col5a1-201ENSMUST00000028280 Reg4Q9D8G5 157 aa11.34□□□□□ -0.59
Col5a1-201ENSMUST00000028280 Ociad2Q9D8W7 154 aa11.34□□□□□ -0.59
Col5a1-201ENSMUST00000028280 Pcdh15Q99PJ1 1943 aa11.34□□□□□ -0.59
Col5a1-201ENSMUST00000028280 Il22ra2Q80XF5 230 aa11.34□□□□□ -0.59
Col5a1-201ENSMUST00000028280 RhohQ9D3G9 191 aa11.34□□□□□ -0.59
Col5a1-201ENSMUST00000028280 Gm2564F6Z9S8 108 aa11.33□□□□□ -0.6
Col5a1-201ENSMUST00000028280 Ccl19O70460 108 aa11.33□□□□□ -0.6
Col5a1-201ENSMUST00000028280 Trav9-1A0A075B601 112 aa11.33□□□□□ -0.6
Col5a1-201ENSMUST00000028280 P18532 116 aa11.33□□□□□ -0.6
Col5a1-201ENSMUST00000028280 Igll1P20764 209 aa11.33□□□□□ -0.6
Col5a1-201ENSMUST00000028280 Folr2Q05685 251 aa11.33□□□□□ -0.6
Col5a1-201ENSMUST00000028280 Ighv1-80A0A075B5Y3 117 aa11.33□□□□□ -0.6
Col5a1-201ENSMUST00000028280 Gm20219A0A1B0GRQ3 87 aa11.33□□□□□ -0.6
Col5a1-201ENSMUST00000028280 Plscr4P58196 326 aa11.33□□□□□ -0.6
Col5a1-201ENSMUST00000028280 Wbp1P97764 304 aa11.33□□□□□ -0.6
Col5a1-201ENSMUST00000028280 Asphd1Q2TA57 360 aa11.33□□□□□ -0.6
Col5a1-201ENSMUST00000028280 Edn1P22387 202 aa11.33□□□□□ -0.6
Col5a1-201ENSMUST00000028280 Trav14-2A0A075B694 121 aa11.33□□□□□ -0.6
Col5a1-201ENSMUST00000028280 Trav9d-1A0A075B699 112 aa11.33□□□□□ -0.6
Col5a1-201ENSMUST00000028280 Id3P41133 119 aa11.32□□□□□ -0.6
Col5a1-201ENSMUST00000028280 Cbln3Q9JHG0 197 aa11.32□□□□□ -0.6
Col5a1-201ENSMUST00000028280 Trav4n-4A0A075B615 110 aa11.32□□□□□ -0.6
Col5a1-201ENSMUST00000028280 Ighv1-62-2A0A0A6YXZ4 119 aa11.32□□□□□ -0.6
Col5a1-201ENSMUST00000028280 Wisp1O54775 367 aa11.32□□□□□ -0.6
Col5a1-201ENSMUST00000028280 Morn5Q9DAI9 170 aa11.32□□□□□ -0.6
Col5a1-201ENSMUST00000028280 Spata46Q4FZF2 204 aa11.32□□□□□ -0.6
Col5a1-201ENSMUST00000028280 Msrb2Q78J03 175 aa11.32□□□□□ -0.6
Col5a1-201ENSMUST00000028280 P01638 115 aa11.32□□□□□ -0.6
Col5a1-201ENSMUST00000028280 Pax9P47242 342 aa11.32□□□□□ -0.6
Col5a1-201ENSMUST00000028280 Csrp2P97314 193 aaKnown RBP11.32□□□□□ -0.6
Col5a1-201ENSMUST00000028280 Tmem30bQ8BHG3 353 aa11.32□□□□□ -0.6
Col5a1-201ENSMUST00000028280 D930007J09RikQ9D2K6 131 aa11.32□□□□□ -0.6
Col5a1-201ENSMUST00000028280 Gm6040Q4QY32 63 aa11.32□□□□□ -0.6
Col5a1-201ENSMUST00000028280 Ighv1-9A0A0A6YW37 117 aa11.31□□□□□ -0.6
Col5a1-201ENSMUST00000028280 MgamB5THE2 1827 aa11.31□□□□□ -0.6
Retrieved 100 of 22,080 RNA–protein pairs in 54.1 ms