RNA–Protein interactions for RNA: ENSMUST00000159405.2

Pcdh1-202, Transcript of Protocadherin 1 (Fragment), mousemouse

APPRIS P1 TSL 5 BASIC

Gene Pcdh1, Length 3,880 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-202ENSMUST00000159405 PkigO70139 76 aa9.88□□□□□ -0.83
Pcdh1-202ENSMUST00000159405 Loxl1P97873 607 aa9.88□□□□□ -0.83
Pcdh1-202ENSMUST00000159405 Olfr1209Q3SXJ3 310 aa9.88□□□□□ -0.83
Pcdh1-202ENSMUST00000159405 C330021F23RikQ8C7T0 141 aa9.88□□□□□ -0.83
Pcdh1-202ENSMUST00000159405 PgpQ8CHP8 321 aa9.88□□□□□ -0.83
Pcdh1-202ENSMUST00000159405 TctaQ8VEA7 122 aa9.88□□□□□ -0.83
Pcdh1-202ENSMUST00000159405 Srd5a2Q99N99 254 aa9.88□□□□□ -0.83
Pcdh1-202ENSMUST00000159405 3100002H09RikQ9CXW6 140 aa9.88□□□□□ -0.83
Pcdh1-202ENSMUST00000159405 TracA0A075B662 137 aa9.88□□□□□ -0.83
Pcdh1-202ENSMUST00000159405 Trav14n-2A0A0G2JDF5 121 aa9.88□□□□□ -0.83
Pcdh1-202ENSMUST00000159405 Gm21974F6W3F3 119 aa9.88□□□□□ -0.83
Pcdh1-202ENSMUST00000159405 TcraP01849 138 aa9.88□□□□□ -0.83
Pcdh1-202ENSMUST00000159405 Saa4P31532 130 aa9.88□□□□□ -0.83
Pcdh1-202ENSMUST00000159405 Gm1968Q3T9I3 115 aa9.88□□□□□ -0.83
Pcdh1-202ENSMUST00000159405 Olfr317Q5NCD6 327 aa9.88□□□□□ -0.83
Pcdh1-202ENSMUST00000159405 Vmn1r63Q9EPT1 300 aa9.88□□□□□ -0.83
Pcdh1-202ENSMUST00000159405 Icam4Q9ERM2 262 aa9.88□□□□□ -0.83
Pcdh1-202ENSMUST00000159405 Vma21-psA0A140T8R2 101 aa9.87□□□□□ -0.83
Pcdh1-202ENSMUST00000159405 Iqcf6G3UWF2 157 aa9.87□□□□□ -0.83
Pcdh1-202ENSMUST00000159405 Fgf6P21658 208 aa9.87□□□□□ -0.83
Pcdh1-202ENSMUST00000159405 Ss18l2Q9D174 77 aa9.87□□□□□ -0.83
Pcdh1-202ENSMUST00000159405 IcosQ9WVS0 200 aa9.87□□□□□ -0.83
Pcdh1-202ENSMUST00000159405 Trav9-1A0A075B601 112 aa9.87□□□□□ -0.83
Pcdh1-202ENSMUST00000159405 P01843 105 aa9.87□□□□□ -0.83
Pcdh1-202ENSMUST00000159405 Ttc9cQ810A3 171 aa9.87□□□□□ -0.83
Pcdh1-202ENSMUST00000159405 Olfr1256Q8VGP1 306 aa9.87□□□□□ -0.83
Pcdh1-202ENSMUST00000159405 Wdr86D3Z757 380 aa9.86□□□□□ -0.83
Pcdh1-202ENSMUST00000159405 Defa2P28309 93 aa9.86□□□□□ -0.83
Pcdh1-202ENSMUST00000159405 Lrrc37aB1AWG4 3215 aa9.86□□□□□ -0.83
Pcdh1-202ENSMUST00000159405 Gm10036E9PYL9 178 aaKnown RBP9.86□□□□□ -0.83
Pcdh1-202ENSMUST00000159405 Tctex1d4Q8CDY7 219 aa9.86□□□□□ -0.83
Pcdh1-202ENSMUST00000159405 Olfr1242Q8VGM6 306 aa9.86□□□□□ -0.83
Pcdh1-202ENSMUST00000159405 Map1lc3aQ91VR7 121 aa9.86□□□□□ -0.83
Pcdh1-202ENSMUST00000159405 Them7Q9DCP4 223 aa9.86□□□□□ -0.83
Pcdh1-202ENSMUST00000159405 MtorQ9JLN9 2549 aa9.86□□□□□ -0.83
Pcdh1-202ENSMUST00000159405 Olfr235E9Q9Z6 312 aa9.86□□□□□ -0.83
Pcdh1-202ENSMUST00000159405 Casp16-psI6L890 176 aa9.86□□□□□ -0.83
Pcdh1-202ENSMUST00000159405 P01794 123 aa9.86□□□□□ -0.83
Pcdh1-202ENSMUST00000159405 Nkx3-1P97436 237 aa9.86□□□□□ -0.83
Pcdh1-202ENSMUST00000159405 Runx1Q03347 451 aa9.86□□□□□ -0.83
Pcdh1-202ENSMUST00000159405 Rai1Q61818 1889 aa9.86□□□□□ -0.83
Pcdh1-202ENSMUST00000159405 Igkv14-111A0A140T8P9 117 aa9.85□□□□□ -0.83
Pcdh1-202ENSMUST00000159405 IgipA0A1B0GR74 53 aa9.85□□□□□ -0.83
Pcdh1-202ENSMUST00000159405 Gm21983D6RFS9 131 aa9.85□□□□□ -0.83
Pcdh1-202ENSMUST00000159405 Ccl25O35903 144 aa9.85□□□□□ -0.83
Pcdh1-202ENSMUST00000159405 Vwc2lQ505H4 222 aa9.85□□□□□ -0.83
Pcdh1-202ENSMUST00000159405 DscamQ9ERC8 2013 aa9.85□□□□□ -0.83
Pcdh1-202ENSMUST00000159405 Ighv14-3A0A075B5R9 117 aa9.85□□□□□ -0.83
Pcdh1-202ENSMUST00000159405 Smlr1J3QMJ4 66 aa9.85□□□□□ -0.83
Pcdh1-202ENSMUST00000159405 Sod1P08228 154 aaKnown RBP9.85□□□□□ -0.83
Pcdh1-202ENSMUST00000159405 Ccl2P10148 148 aa9.85□□□□□ -0.83
Pcdh1-202ENSMUST00000159405 Col8a2P25318 699 aa9.85□□□□□ -0.83
Pcdh1-202ENSMUST00000159405 MycbQ6P8Z1 170 aa9.85□□□□□ -0.83
Pcdh1-202ENSMUST00000159405 Dusp14Q9JLY7 198 aa9.85□□□□□ -0.83
Pcdh1-202ENSMUST00000159405 Chac1Q8R3J5 223 aa9.85□□□□□ -0.83
Pcdh1-202ENSMUST00000159405 Zfp950A0A0U1RQ46 609 aa9.84□□□□□ -0.83
Pcdh1-202ENSMUST00000159405 P01801 115 aa9.84□□□□□ -0.83
Pcdh1-202ENSMUST00000159405 Tstd1E9PY03 133 aa9.84□□□□□ -0.83
Pcdh1-202ENSMUST00000159405 Ccl11P48298 97 aa9.84□□□□□ -0.83
Pcdh1-202ENSMUST00000159405 CampP51437 172 aa9.84□□□□□ -0.83
Pcdh1-202ENSMUST00000159405 Gm6899Q3USS0 134 aa9.84□□□□□ -0.83
Pcdh1-202ENSMUST00000159405 Cd52Q64389 74 aa9.84□□□□□ -0.83
Pcdh1-202ENSMUST00000159405 AamdcQ8R0P4 122 aa9.84□□□□□ -0.83
Pcdh1-202ENSMUST00000159405 Cd209gD3Z5D4 194 aa9.84□□□□□ -0.83
Pcdh1-202ENSMUST00000159405 Col4a2P08122 1707 aa9.83□□□□□ -0.84
Pcdh1-202ENSMUST00000159405 Ighv9-3A0A0B4J1J5 117 aa9.83□□□□□ -0.84
Pcdh1-202ENSMUST00000159405 Lgals6O54891 301 aa9.83□□□□□ -0.84
Pcdh1-202ENSMUST00000159405 Ube2d2bQ6ZWY6 147 aa9.83□□□□□ -0.84
Pcdh1-202ENSMUST00000159405 Slc25a16Q8C0K5 332 aa9.83□□□□□ -0.84
Pcdh1-202ENSMUST00000159405 Cysltr1Q99JA4 352 aa9.83□□□□□ -0.84
Pcdh1-202ENSMUST00000159405 Prr13Q9CQJ5 137 aa9.83□□□□□ -0.84
Pcdh1-202ENSMUST00000159405 Mrpl53Q9D1H8 118 aaKnown RBP9.83□□□□□ -0.84
Pcdh1-202ENSMUST00000159405 4933414I15RikQ9D4D5 133 aa9.83□□□□□ -0.84
Pcdh1-202ENSMUST00000159405 Myo15aQ9QZZ4 3511 aa9.83□□□□□ -0.84
Pcdh1-202ENSMUST00000159405 Gm28539A0A087WSL9 92 aa9.83□□□□□ -0.84
Pcdh1-202ENSMUST00000159405 Esp3J3QN49 87 aa9.83□□□□□ -0.84
Pcdh1-202ENSMUST00000159405 Prss29Q99MS4 279 aa9.83□□□□□ -0.84
Pcdh1-202ENSMUST00000159405 Spry4Q9WTP2 300 aa9.83□□□□□ -0.84
Pcdh1-202ENSMUST00000159405 Trav4-4-dv10A0A075B651 110 aa9.83□□□□□ -0.84
Pcdh1-202ENSMUST00000159405 Scgb1b2O35176 93 aa9.83□□□□□ -0.84
Pcdh1-202ENSMUST00000159405 P01680 129 aa9.83□□□□□ -0.84
Pcdh1-202ENSMUST00000159405 Spink13Q3UTS8 97 aa9.83□□□□□ -0.84
Pcdh1-202ENSMUST00000159405 Rbfox3Q8BIF2 374 aa9.83□□□□□ -0.84
Pcdh1-202ENSMUST00000159405 Ramp3Q9WUP1 147 aa9.83□□□□□ -0.84
Pcdh1-202ENSMUST00000159405 Olfr364-ps1A0A140T8Q2 307 aa9.82□□□□□ -0.84
Pcdh1-202ENSMUST00000159405 Gm21060J3KMU4 56 aa9.82□□□□□ -0.84
Pcdh1-202ENSMUST00000159405 Defa1P11477 93 aa9.82□□□□□ -0.84
Pcdh1-202ENSMUST00000159405 P18530 117 aa9.82□□□□□ -0.84
Pcdh1-202ENSMUST00000159405 Tal2Q62282 108 aa9.82□□□□□ -0.84
Pcdh1-202ENSMUST00000159405 Ccl12Q62401 104 aa9.82□□□□□ -0.84
Pcdh1-202ENSMUST00000159405 Ighv14-1A0A075B5R4 117 aa9.82□□□□□ -0.84
Pcdh1-202ENSMUST00000159405 Fam240aJ3QNP9 97 aa9.82□□□□□ -0.84
Pcdh1-202ENSMUST00000159405 Cox7a2P48771 83 aa9.82□□□□□ -0.84
Pcdh1-202ENSMUST00000159405 Samd5Q3V1H9 173 aa9.82□□□□□ -0.84
Pcdh1-202ENSMUST00000159405 A0A1L1SR50 188 aa9.82□□□□□ -0.84
Pcdh1-202ENSMUST00000159405 Tmem92B7ZWI3 162 aa9.82□□□□□ -0.84
Pcdh1-202ENSMUST00000159405 Onecut1O08755 465 aa9.82□□□□□ -0.84
Pcdh1-202ENSMUST00000159405 Cd59aO55186 123 aa9.82□□□□□ -0.84
Pcdh1-202ENSMUST00000159405 Wt1P22561 449 aa9.82□□□□□ -0.84
Pcdh1-202ENSMUST00000159405 Cd24P24807 76 aa9.82□□□□□ -0.84
Retrieved 100 of 22,080 RNA–protein pairs in 107.8 ms